RNA–Protein interactions for RNA: ENST00000529944.1

PGAP2-233, Transcript of post-GPI attachment to proteins 2, human

TSL 4

Gene PGAP2, Length 539 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PGAP2-233	ENST00000529944	RTFDC1	Q9BY42	306 aa	Predicted RBP	18.47	■□□□□ 0.55
PGAP2-233	ENST00000529944	MKRN1	Q9UHC7	482 aa	Known RBP	18.46	■□□□□ 0.55
PGAP2-233	ENST00000529944	CNTNAP1	P78357	1384 aa		18.45	■□□□□ 0.54
PGAP2-233	ENST00000529944	TMEM88B	A6NKF7	163 aa		18.45	■□□□□ 0.54
PGAP2-233	ENST00000529944	ATP5J2-PTCD1	G3V325	749 aa		18.45	■□□□□ 0.54
PGAP2-233	ENST00000529944	HSPA1A	P0DMV8	641 aa	Known RBP	18.45	■□□□□ 0.54
PGAP2-233	ENST00000529944	HSPA1B	P0DMV9	641 aa	Known RBP	18.45	■□□□□ 0.54
PGAP2-233	ENST00000529944	SCNN1D	P51172	638 aa		18.45	■□□□□ 0.54
PGAP2-233	ENST00000529944	MPND	Q8N594	471 aa		18.45	■□□□□ 0.54
PGAP2-233	ENST00000529944	SPEF2	Q9C093	1822 aa		18.44	■□□□□ 0.54
PGAP2-233	ENST00000529944	GOLGA2	Q08379	1002 aa		18.44	■□□□□ 0.54
PGAP2-233	ENST00000529944	MAP1S	Q66K74	1059 aa	Predicted RBP	18.44	■□□□□ 0.54
PGAP2-233	ENST00000529944	CNTROB	Q8N137	903 aa		18.44	■□□□□ 0.54
PGAP2-233	ENST00000529944	ZNF428	Q96B54	188 aa		18.44	■□□□□ 0.54
PGAP2-233	ENST00000529944	ZNRF3	Q9ULT6	936 aa		18.44	■□□□□ 0.54
PGAP2-233	ENST00000529944	POLR2A	P24928	1970 aa	Known RBP	18.44	■□□□□ 0.54
PGAP2-233	ENST00000529944	KIAA2012	Q0VF49	1180 aa		18.43	■□□□□ 0.54
PGAP2-233	ENST00000529944	TRIM28	Q13263	835 aa	Known RBP	18.43	■□□□□ 0.54
PGAP2-233	ENST00000529944	FAM89A	Q96GI7	184 aa		18.43	■□□□□ 0.54
PGAP2-233	ENST00000529944	CHMP4A	Q9BY43	222 aa		18.43	■□□□□ 0.54
PGAP2-233	ENST00000529944	PSME4	Q14997	1843 aa		18.43	■□□□□ 0.54
PGAP2-233	ENST00000529944	COL4A1	P02462	1669 aa		18.43	■□□□□ 0.54
PGAP2-233	ENST00000529944	EPS15	P42566	896 aa		18.42	■□□□□ 0.54
PGAP2-233	ENST00000529944	SF3B3	Q15393	1217 aa	Known RBP	18.42	■□□□□ 0.54
PGAP2-233	ENST00000529944	COL13A1	Q5TAT6	717 aa	Predicted RBP	18.42	■□□□□ 0.54
PGAP2-233	ENST00000529944	USP50	Q70EL3	339 aa	Predicted RBP	18.42	■□□□□ 0.54
PGAP2-233	ENST00000529944	RIC3	Q7Z5B4	369 aa		18.42	■□□□□ 0.54
PGAP2-233	ENST00000529944	ELL2	O00472	640 aa	Predicted RBP	18.41	■□□□□ 0.54
PGAP2-233	ENST00000529944	GPRC5D	Q9NZD1	345 aa		18.41	■□□□□ 0.54
PGAP2-233	ENST00000529944	CDHR2	Q9BYE9	1310 aa		18.41	■□□□□ 0.54
PGAP2-233	ENST00000529944	SCN9A	Q15858	1988 aa		18.41	■□□□□ 0.54
PGAP2-233	ENST00000529944	IRS4	O14654	1257 aa	Predicted RBP	18.4	■□□□□ 0.54
PGAP2-233	ENST00000529944	HSP90B1	P14625	803 aa	Known RBP	18.4	■□□□□ 0.54
PGAP2-233	ENST00000529944	CXCL9	Q07325	125 aa		18.4	■□□□□ 0.54
PGAP2-233	ENST00000529944	PHAX	Q9H814	394 aa	Known RBP	18.4	■□□□□ 0.54
PGAP2-233	ENST00000529944	THSD7B	Q9C0I4	1608 aa		18.4	■□□□□ 0.54
PGAP2-233	ENST00000529944	RTL5	Q5HYW3	569 aa	Predicted RBP	18.39	■□□□□ 0.53
PGAP2-233	ENST00000529944	CCDC30	Q5VVM6	783 aa		18.39	■□□□□ 0.53
PGAP2-233	ENST00000529944	CIAPIN1	Q6FI81	312 aa		18.39	■□□□□ 0.53
PGAP2-233	ENST00000529944	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	18.39	■□□□□ 0.53
PGAP2-233	ENST00000529944	C8orf58	Q8NAV2	365 aa		18.39	■□□□□ 0.53
PGAP2-233	ENST00000529944	CELF1	Q92879	486 aa	Known RBP	18.39	■□□□□ 0.53
PGAP2-233	ENST00000529944	ADARB2	Q9NS39	739 aa	Known RBP	18.39	■□□□□ 0.53
PGAP2-233	ENST00000529944	DDX58	O95786	925 aa	Known RBP	18.38	■□□□□ 0.53
PGAP2-233	ENST00000529944	TNIP1	Q15025	636 aa		18.38	■□□□□ 0.53
PGAP2-233	ENST00000529944	RASSF10	A6NK89	507 aa		18.37	■□□□□ 0.53
PGAP2-233	ENST00000529944	GMPS	P49915	693 aa	Predicted RBP	18.37	■□□□□ 0.53
PGAP2-233	ENST00000529944	CCDC191	Q8NCU4	936 aa		18.37	■□□□□ 0.53
PGAP2-233	ENST00000529944	MYD88	Q99836	296 aa		18.37	■□□□□ 0.53
PGAP2-233	ENST00000529944	NSFL1C	Q9UNZ2	370 aa	Known RBP	18.37	■□□□□ 0.53
PGAP2-233	ENST00000529944	RAD17	O75943	681 aa		18.36	■□□□□ 0.53
PGAP2-233	ENST00000529944	VEGFB	P49765	207 aa		18.36	■□□□□ 0.53
PGAP2-233	ENST00000529944	CCDC27	Q2M243	656 aa		18.36	■□□□□ 0.53
PGAP2-233	ENST00000529944	TNS4	Q8IZW8	715 aa		18.36	■□□□□ 0.53
PGAP2-233	ENST00000529944	BCL2L13	Q9BXK5	485 aa		18.36	■□□□□ 0.53
PGAP2-233	ENST00000529944	CWC25	Q9NXE8	425 aa	Predicted RBP	18.36	■□□□□ 0.53
PGAP2-233	ENST00000529944	ABT1	Q9ULW3	272 aa	Known RBP	18.36	■□□□□ 0.53
PGAP2-233	ENST00000529944	RPS8	P62241	208 aa	Known RBP	18.35	■□□□□ 0.53
PGAP2-233	ENST00000529944	WASHC4	Q2M389	1173 aa		18.35	■□□□□ 0.53
PGAP2-233	ENST00000529944	CCDC184	Q52MB2	194 aa		18.35	■□□□□ 0.53
PGAP2-233	ENST00000529944	METTL22	Q9BUU2	404 aa	Predicted RBP	18.35	■□□□□ 0.53
PGAP2-233	ENST00000529944	YDJC	A8MPS7	323 aa		18.34	■□□□□ 0.53
PGAP2-233	ENST00000529944	PCCA	P05165	728 aa	Predicted RBP	18.34	■□□□□ 0.53
PGAP2-233	ENST00000529944	DEFB115	Q30KQ5	88 aa		18.34	■□□□□ 0.53
PGAP2-233	ENST00000529944	CCDC152	Q4G0S7	254 aa		18.34	■□□□□ 0.53
PGAP2-233	ENST00000529944	C6orf229	H3BNL8	230 aa		18.33	■□□□□ 0.52
PGAP2-233	ENST00000529944	GPSM2	P81274	684 aa		18.33	■□□□□ 0.52
PGAP2-233	ENST00000529944	WWC1	Q8IX03	1113 aa		18.33	■□□□□ 0.52
PGAP2-233	ENST00000529944	TSPYL6	Q8N831	410 aa		18.33	■□□□□ 0.52
PGAP2-233	ENST00000529944	TSR2	Q969E8	191 aa	Known RBP	18.33	■□□□□ 0.52
PGAP2-233	ENST00000529944	AIDA	Q96BJ3	306 aa		18.33	■□□□□ 0.52
PGAP2-233	ENST00000529944	EYA3	Q99504	573 aa		18.33	■□□□□ 0.52
PGAP2-233	ENST00000529944	STK31	Q9BXU1	1019 aa		18.33	■□□□□ 0.52
PGAP2-233	ENST00000529944	IL16	Q14005	1332 aa		18.32	■□□□□ 0.52
PGAP2-233	ENST00000529944	PDE8A	O60658	829 aa		18.32	■□□□□ 0.52
PGAP2-233	ENST00000529944	DBNDD1	Q9H9R9	158 aa		18.32	■□□□□ 0.52
PGAP2-233	ENST00000529944	POLL	Q9UGP5	575 aa		18.32	■□□□□ 0.52
PGAP2-233	ENST00000529944	MAP3K2	Q9Y2U5	619 aa		18.32	■□□□□ 0.52
PGAP2-233	ENST00000529944		H7C1D1	291 aa		18.31	■□□□□ 0.52
PGAP2-233	ENST00000529944	TRAF5	O00463	557 aa		18.31	■□□□□ 0.52
PGAP2-233	ENST00000529944	NCBP3	Q53F19	620 aa	Known RBP	18.31	■□□□□ 0.52
PGAP2-233	ENST00000529944	KSR2	Q6VAB6	950 aa		18.31	■□□□□ 0.52
PGAP2-233	ENST00000529944	TBC1D16	Q8TBP0	767 aa		18.31	■□□□□ 0.52
PGAP2-233	ENST00000529944	ZC3H15	Q8WU90	426 aa	Known RBP	18.31	■□□□□ 0.52
PGAP2-233	ENST00000529944	SEC31B	Q9NQW1	1179 aa		18.31	■□□□□ 0.52
PGAP2-233	ENST00000529944	CNOT7	Q9UIV1	285 aa	Known RBP	18.31	■□□□□ 0.52
PGAP2-233	ENST00000529944	WDR33	Q9C0J8	1336 aa	Known RBP	18.3	■□□□□ 0.52
PGAP2-233	ENST00000529944	RIMBP2	O15034	1052 aa		18.3	■□□□□ 0.52
PGAP2-233	ENST00000529944	FOXN1	O15353	648 aa		18.3	■□□□□ 0.52
PGAP2-233	ENST00000529944	FMR1	Q06787	632 aa	Known RBP eCLIP	18.3	■□□□□ 0.52
PGAP2-233	ENST00000529944	NEXN	Q0ZGT2	675 aa		18.3	■□□□□ 0.52
PGAP2-233	ENST00000529944	TWISTNB	Q3B726	338 aa	Predicted RBP	18.3	■□□□□ 0.52
PGAP2-233	ENST00000529944	DPF2	Q92785	391 aa		18.3	■□□□□ 0.52
PGAP2-233	ENST00000529944	MRS2	Q9HD23	443 aa		18.3	■□□□□ 0.52
PGAP2-233	ENST00000529944	PODXL2	Q9NZ53	605 aa		18.3	■□□□□ 0.52
PGAP2-233	ENST00000529944	PGAP2	Q9UHJ9	254 aa		18.3	■□□□□ 0.52
PGAP2-233	ENST00000529944	ZNF646	O15015	1829 aa	Predicted RBP	18.29	■□□□□ 0.52
PGAP2-233	ENST00000529944	PI4KAP2	A4QPH2	592 aa		18.29	■□□□□ 0.52
PGAP2-233	ENST00000529944	PSMD14	O00487	310 aa		18.29	■□□□□ 0.52
PGAP2-233	ENST00000529944	ECE2	O60344	883 aa		18.29	■□□□□ 0.52

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