RNA–Protein interactions for RNA: ENST00000529904.2

SNRNP35-206, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 4

Gene SNRNP35, Length 382 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-206ENST00000529904 GRAPQ13588 217 aa16.02■□□□□ 0.16
SNRNP35-206ENST00000529904 GRIPAP1Q4V328 841 aa16.02■□□□□ 0.16
SNRNP35-206ENST00000529904 GRAPLQ8TC17 118 aaPredicted RBP16.02■□□□□ 0.16
SNRNP35-206ENST00000529904 PTPRCP08575 1304 aa16.01■□□□□ 0.15
SNRNP35-206ENST00000529904 CCDC152Q4G0S7 254 aa16.01■□□□□ 0.15
SNRNP35-206ENST00000529904 BEND3Q5T5X7 828 aa16.01■□□□□ 0.15
SNRNP35-206ENST00000529904 ATP6V0A2Q9Y487 856 aa16.01■□□□□ 0.15
SNRNP35-206ENST00000529904 ZC3H4Q9UPT8 1303 aaKnown RBP16■□□□□ 0.15
SNRNP35-206ENST00000529904 H7C1W4 665 aa16■□□□□ 0.15
SNRNP35-206ENST00000529904 TMC4Q7Z404 712 aa16■□□□□ 0.15
SNRNP35-206ENST00000529904 SRCIN1Q9C0H9 1055 aa16■□□□□ 0.15
SNRNP35-206ENST00000529904 ZNF277Q9NRM2 450 aaPredicted RBP16■□□□□ 0.15
SNRNP35-206ENST00000529904 ZBED9Q6R2W3 1325 aa15.99■□□□□ 0.15
SNRNP35-206ENST00000529904 CTSWP56202 376 aa15.99■□□□□ 0.15
SNRNP35-206ENST00000529904 SP8Q8IXZ3 490 aa15.99■□□□□ 0.15
SNRNP35-206ENST00000529904 CCDC85AQ96PX6 553 aaPredicted RBP15.99■□□□□ 0.15
SNRNP35-206ENST00000529904 PSMD1Q99460 953 aa15.99■□□□□ 0.15
SNRNP35-206ENST00000529904 CCDC88AQ3V6T2 1871 aa15.99■□□□□ 0.15
SNRNP35-206ENST00000529904 KDM2BQ8NHM5 1336 aa15.98■□□□□ 0.15
SNRNP35-206ENST00000529904 ALDH1L1O75891 902 aa15.98■□□□□ 0.15
SNRNP35-206ENST00000529904 TIAM2Q8IVF5 1701 aa15.98■□□□□ 0.15
SNRNP35-206ENST00000529904 CELF1Q92879 486 aaKnown RBP15.98■□□□□ 0.15
SNRNP35-206ENST00000529904 C9orf78Q9NZ63 289 aaPredicted RBP15.98■□□□□ 0.15
SNRNP35-206ENST00000529904 IARSP41252 1262 aaKnown RBP15.97■□□□□ 0.15
SNRNP35-206ENST00000529904 RARSP54136 660 aaKnown RBP15.97■□□□□ 0.15
SNRNP35-206ENST00000529904 RPS8P62241 208 aaKnown RBP15.97■□□□□ 0.15
SNRNP35-206ENST00000529904 DPY19L2Q6NUT2 758 aa15.97■□□□□ 0.15
SNRNP35-206ENST00000529904 DPP8Q6V1X1 898 aaPredicted RBP15.97■□□□□ 0.15
SNRNP35-206ENST00000529904 SLC51AQ86UW1 340 aa15.97■□□□□ 0.15
SNRNP35-206ENST00000529904 SEC31BQ9NQW1 1179 aa15.97■□□□□ 0.15
SNRNP35-206ENST00000529904 TAF1P21675 1872 aa15.97■□□□□ 0.15
SNRNP35-206ENST00000529904 SNED1Q8TER0 1413 aa15.96■□□□□ 0.15
SNRNP35-206ENST00000529904 GRM8O00222 908 aa15.96■□□□□ 0.15
SNRNP35-206ENST00000529904 MPNDQ8N594 471 aa15.96■□□□□ 0.15
SNRNP35-206ENST00000529904 TTLL11Q8NHH1 800 aa15.96■□□□□ 0.15
SNRNP35-206ENST00000529904 CASP7P55210 303 aa15.95■□□□□ 0.14
SNRNP35-206ENST00000529904 ANKRD18AQ8IVF6 992 aa15.95■□□□□ 0.14
SNRNP35-206ENST00000529904 SUPT20HQ8NEM7 779 aa15.95■□□□□ 0.14
SNRNP35-206ENST00000529904 JDP2Q8WYK2 163 aa15.95■□□□□ 0.14
SNRNP35-206ENST00000529904 CDC5LQ99459 802 aaKnown RBP15.95■□□□□ 0.14
SNRNP35-206ENST00000529904 PLA2G12BQ9BX93 195 aa15.95■□□□□ 0.14
SNRNP35-206ENST00000529904 NOB1Q9ULX3 412 aaKnown RBP15.95■□□□□ 0.14
SNRNP35-206ENST00000529904 DICER1Q9UPY3 1922 aaKnown RBP15.95■□□□□ 0.14
SNRNP35-206ENST00000529904 KIF16BQ96L93 1317 aa15.94■□□□□ 0.14
SNRNP35-206ENST00000529904 GLTPD2A6NH11 291 aa15.94■□□□□ 0.14
SNRNP35-206ENST00000529904 BRPF1P55201 1214 aaPredicted RBP15.94■□□□□ 0.14
SNRNP35-206ENST00000529904 LARGE2Q8N3Y3 721 aa15.94■□□□□ 0.14
SNRNP35-206ENST00000529904 GREM2Q9H772 168 aa15.94■□□□□ 0.14
SNRNP35-206ENST00000529904 NSFL1CQ9UNZ2 370 aaKnown RBP15.94■□□□□ 0.14
SNRNP35-206ENST00000529904 MYH3P11055 1940 aa15.94■□□□□ 0.14
SNRNP35-206ENST00000529904 PPIP5K2O43314 1243 aa15.93■□□□□ 0.14
SNRNP35-206ENST00000529904 RTFDC1Q9BY42 306 aaPredicted RBP15.93■□□□□ 0.14
SNRNP35-206ENST00000529904 API5Q9BZZ5 524 aaKnown RBP15.93■□□□□ 0.14
SNRNP35-206ENST00000529904 NMRK2Q9NPI5 230 aa15.93■□□□□ 0.14
SNRNP35-206ENST00000529904 LRRC37AA6NMS7 1700 aa15.93■□□□□ 0.14
SNRNP35-206ENST00000529904 COL4A1P02462 1669 aa15.92■□□□□ 0.14
SNRNP35-206ENST00000529904 RTL9Q8NET4 1388 aa15.92■□□□□ 0.14
SNRNP35-206ENST00000529904 ITGA6P23229 1130 aa15.92■□□□□ 0.14
SNRNP35-206ENST00000529904 VPS33BQ9H267 617 aa15.92■□□□□ 0.14
SNRNP35-206ENST00000529904 CHMP3Q9Y3E7 222 aa15.92■□□□□ 0.14
SNRNP35-206ENST00000529904 CSF1RP07333 972 aa15.91■□□□□ 0.14
SNRNP35-206ENST00000529904 GPSM2P81274 684 aa15.91■□□□□ 0.14
SNRNP35-206ENST00000529904 FOXO4P98177 505 aa15.91■□□□□ 0.14
SNRNP35-206ENST00000529904 AOC3Q16853 763 aa15.91■□□□□ 0.14
SNRNP35-206ENST00000529904 NIM1KQ8IY84 436 aa15.91■□□□□ 0.14
SNRNP35-206ENST00000529904 FRAT1Q92837 279 aaPredicted RBP15.91■□□□□ 0.14
SNRNP35-206ENST00000529904 RRAGCQ9HB90 399 aa15.91■□□□□ 0.14
SNRNP35-206ENST00000529904 ANKIB1Q9P2G1 1089 aa15.91■□□□□ 0.14
SNRNP35-206ENST00000529904 C6orf229H3BNL8 230 aa15.9■□□□□ 0.14
SNRNP35-206ENST00000529904 IPO8O15397 1037 aaKnown RBP15.9■□□□□ 0.14
SNRNP35-206ENST00000529904 NBPF7P0C2Y1 421 aaPredicted RBP15.9■□□□□ 0.14
SNRNP35-206ENST00000529904 IGHMBP2P38935 993 aaKnown RBP15.9■□□□□ 0.14
SNRNP35-206ENST00000529904 CCT4P50991 539 aaKnown RBP15.9■□□□□ 0.14
SNRNP35-206ENST00000529904 FAM161AQ3B820 660 aa15.9■□□□□ 0.14
SNRNP35-206ENST00000529904 LMBR1LQ6UX01 489 aa15.9■□□□□ 0.14
SNRNP35-206ENST00000529904 ARHGAP45Q92619 1136 aa15.9■□□□□ 0.14
SNRNP35-206ENST00000529904 ANKRD18BA2A2Z9 1011 aa15.89■□□□□ 0.13
SNRNP35-206ENST00000529904 FZD9O00144 591 aa15.89■□□□□ 0.13
SNRNP35-206ENST00000529904 KIF3CO14782 793 aa15.89■□□□□ 0.13
SNRNP35-206ENST00000529904 BCAR3O75815 825 aa15.89■□□□□ 0.13
SNRNP35-206ENST00000529904 DDNO94850 711 aaPredicted RBP15.89■□□□□ 0.13
SNRNP35-206ENST00000529904 EIF6P56537 245 aaKnown RBP15.89■□□□□ 0.13
SNRNP35-206ENST00000529904 KIAA2012Q0VF49 1180 aa15.89■□□□□ 0.13
SNRNP35-206ENST00000529904 IFIT5Q13325 482 aaKnown RBP15.89■□□□□ 0.13
SNRNP35-206ENST00000529904 WASHC4Q2M389 1173 aa15.89■□□□□ 0.13
SNRNP35-206ENST00000529904 C16orf71Q8IYS4 520 aaPredicted RBP15.89■□□□□ 0.13
SNRNP35-206ENST00000529904 MPHOSPH8Q99549 860 aa15.89■□□□□ 0.13
SNRNP35-206ENST00000529904 BSDC1Q9NW68 430 aaPredicted RBP15.89■□□□□ 0.13
SNRNP35-206ENST00000529904 UTYO14607 1347 aa15.89■□□□□ 0.13
SNRNP35-206ENST00000529904 VEGFAP15692 232 aaPredicted RBP15.88■□□□□ 0.13
SNRNP35-206ENST00000529904 CCDC57Q2TAC2 916 aa15.88■□□□□ 0.13
SNRNP35-206ENST00000529904 EPHA10Q5JZY3 1008 aa15.88■□□□□ 0.13
SNRNP35-206ENST00000529904 SUCLG2Q96I99 432 aa15.88■□□□□ 0.13
SNRNP35-206ENST00000529904 EYA3Q99504 573 aa15.88■□□□□ 0.13
SNRNP35-206ENST00000529904 PODXL2Q9NZ53 605 aa15.88■□□□□ 0.13
SNRNP35-206ENST00000529904 XDHP47989 1333 aa15.88■□□□□ 0.13
SNRNP35-206ENST00000529904 ZNF541Q9H0D2 1346 aa15.88■□□□□ 0.13
SNRNP35-206ENST00000529904 DUOX1Q9NRD9 1551 aa15.87■□□□□ 0.13
SNRNP35-206ENST00000529904 COL4A5P29400 1685 aa15.87■□□□□ 0.13
SNRNP35-206ENST00000529904 UFL1O94874 794 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms