RNA–Protein interactions for RNA: ENST00000529307.1

CAPRIN1-207, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAPRIN1, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-207ENST00000529307 KIAA1211Q6ZU35 1233 aa20.25■□□□□ 0.83
CAPRIN1-207ENST00000529307 LINC00116Q8NCU8 138 aa20.25■□□□□ 0.83
CAPRIN1-207ENST00000529307 IL25Q9H293 177 aa20.25■□□□□ 0.83
CAPRIN1-207ENST00000529307 ZNF34Q8IZ26 560 aa20.25■□□□□ 0.83
CAPRIN1-207ENST00000529307 TRIM44Q96DX7 344 aaPredicted RBP20.25■□□□□ 0.83
CAPRIN1-207ENST00000529307 PLA2G12BQ9BX93 195 aa20.25■□□□□ 0.83
CAPRIN1-207ENST00000529307 ANKRD36CQ5JPF3 1778 aa20.25■□□□□ 0.83
CAPRIN1-207ENST00000529307 GRPEL1Q9HAV7 217 aa20.24■□□□□ 0.83
CAPRIN1-207ENST00000529307 ONECUT3O60422 494 aaPredicted RBP20.24■□□□□ 0.83
CAPRIN1-207ENST00000529307 MCM4P33991 863 aa20.24■□□□□ 0.83
CAPRIN1-207ENST00000529307 TNNI3KQ59H18 835 aa20.24■□□□□ 0.83
CAPRIN1-207ENST00000529307 FPGT-TNNI3KV9GXZ4 949 aa20.24■□□□□ 0.83
CAPRIN1-207ENST00000529307 COL5A3P25940 1745 aaPredicted RBP20.24■□□□□ 0.83
CAPRIN1-207ENST00000529307 CAMTA2O94983 1202 aa20.23■□□□□ 0.83
CAPRIN1-207ENST00000529307 LRRC24Q50LG9 513 aa20.23■□□□□ 0.83
CAPRIN1-207ENST00000529307 CCDC85AQ96PX6 553 aaPredicted RBP20.23■□□□□ 0.83
CAPRIN1-207ENST00000529307 CDHR2Q9BYE9 1310 aa20.23■□□□□ 0.83
CAPRIN1-207ENST00000529307 CSF1RP07333 972 aa20.23■□□□□ 0.83
CAPRIN1-207ENST00000529307 GPATCH3Q96I76 525 aa20.23■□□□□ 0.83
CAPRIN1-207ENST00000529307 DBNLQ9UJU6 430 aaKnown RBP20.23■□□□□ 0.83
CAPRIN1-207ENST00000529307 TRPC5Q9UL62 973 aaPredicted RBP20.23■□□□□ 0.83
CAPRIN1-207ENST00000529307 REC8O95072 547 aa20.22■□□□□ 0.83
CAPRIN1-207ENST00000529307 CNTROBQ8N137 903 aa20.22■□□□□ 0.83
CAPRIN1-207ENST00000529307 PUS3Q9BZE2 481 aaKnown RBP20.22■□□□□ 0.83
CAPRIN1-207ENST00000529307 TRMT112Q9UI30 125 aaKnown RBP20.22■□□□□ 0.83
CAPRIN1-207ENST00000529307 ZNF831Q5JPB2 1677 aa20.21■□□□□ 0.83
CAPRIN1-207ENST00000529307 SEPT12Q8IYM1 358 aa20.21■□□□□ 0.83
CAPRIN1-207ENST00000529307 GZF1Q9H116 711 aaPredicted RBP20.21■□□□□ 0.83
CAPRIN1-207ENST00000529307 BTAF1O14981 1849 aa20.21■□□□□ 0.83
CAPRIN1-207ENST00000529307 NHSQ6T4R5 1651 aa20.2■□□□□ 0.82
CAPRIN1-207ENST00000529307 EYA2O00167 538 aa20.2■□□□□ 0.82
CAPRIN1-207ENST00000529307 CD2BP2O95400 341 aaKnown RBP20.2■□□□□ 0.82
CAPRIN1-207ENST00000529307 AK9Q5TCS8 1911 aa20.19■□□□□ 0.82
CAPRIN1-207ENST00000529307 IRS4O14654 1257 aaPredicted RBP20.19■□□□□ 0.82
CAPRIN1-207ENST00000529307 SMIM5Q71RC9 77 aa20.19■□□□□ 0.82
CAPRIN1-207ENST00000529307 TTLL11Q8NHH1 800 aa20.19■□□□□ 0.82
CAPRIN1-207ENST00000529307 DBNDD2Q9BQY9 259 aa20.19■□□□□ 0.82
CAPRIN1-207ENST00000529307 BOLA2Q9H3K6 86 aa20.19■□□□□ 0.82
CAPRIN1-207ENST00000529307 TRAK2O60296 914 aa20.19■□□□□ 0.82
CAPRIN1-207ENST00000529307 IL15P40933 162 aaPredicted RBP20.19■□□□□ 0.82
CAPRIN1-207ENST00000529307 CCDC57Q2TAC2 916 aa20.19■□□□□ 0.82
CAPRIN1-207ENST00000529307 SUSD4Q5VX71 490 aa20.19■□□□□ 0.82
CAPRIN1-207ENST00000529307 QTRT2Q9H974 415 aaKnown RBP20.19■□□□□ 0.82
CAPRIN1-207ENST00000529307 SNX21Q969T3 373 aa20.18■□□□□ 0.82
CAPRIN1-207ENST00000529307 CIAO1O76071 339 aa20.18■□□□□ 0.82
CAPRIN1-207ENST00000529307 GREM2Q9H772 168 aa20.18■□□□□ 0.82
CAPRIN1-207ENST00000529307 OFD1O75665 1012 aa20.17■□□□□ 0.82
CAPRIN1-207ENST00000529307 CTSWP56202 376 aa20.17■□□□□ 0.82
CAPRIN1-207ENST00000529307 SGSM2O43147 1006 aa20.16■□□□□ 0.82
CAPRIN1-207ENST00000529307 EVI5LQ96CN4 794 aa20.16■□□□□ 0.82
CAPRIN1-207ENST00000529307 ANO2Q9NQ90 1003 aa20.16■□□□□ 0.82
CAPRIN1-207ENST00000529307 CNTNAP4Q9C0A0 1308 aa20.16■□□□□ 0.82
CAPRIN1-207ENST00000529307 EP400Q96L91 3159 aa20.16■□□□□ 0.82
CAPRIN1-207ENST00000529307 FAM177BA6PVY3 158 aa20.15■□□□□ 0.82
CAPRIN1-207ENST00000529307 TIMM10P62072 90 aa20.15■□□□□ 0.82
CAPRIN1-207ENST00000529307 IFIT5Q13325 482 aaKnown RBP20.15■□□□□ 0.82
CAPRIN1-207ENST00000529307 MTERF4Q7Z6M4 381 aaKnown RBP20.15■□□□□ 0.82
CAPRIN1-207ENST00000529307 ATP5JP18859 108 aa20.15■□□□□ 0.82
CAPRIN1-207ENST00000529307 ITGA6P23229 1130 aa20.15■□□□□ 0.82
CAPRIN1-207ENST00000529307 CWC27Q6UX04 472 aaKnown RBP20.15■□□□□ 0.82
CAPRIN1-207ENST00000529307 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.15■□□□□ 0.82
CAPRIN1-207ENST00000529307 HSCBQ8IWL3 235 aa20.15■□□□□ 0.82
CAPRIN1-207ENST00000529307 SPRYD3Q8NCJ5 442 aa20.15■□□□□ 0.82
CAPRIN1-207ENST00000529307 EDC3Q96F86 508 aaKnown RBP20.15■□□□□ 0.82
CAPRIN1-207ENST00000529307 GPR108Q9NPR9 543 aa20.15■□□□□ 0.82
CAPRIN1-207ENST00000529307 PDE8AO60658 829 aa20.14■□□□□ 0.81
CAPRIN1-207ENST00000529307 PDIA4P13667 645 aaKnown RBP20.14■□□□□ 0.81
CAPRIN1-207ENST00000529307 NDUFB9Q9Y6M9 179 aa20.14■□□□□ 0.81
CAPRIN1-207ENST00000529307 SBF2Q86WG5 1849 aa20.14■□□□□ 0.81
CAPRIN1-207ENST00000529307 PALD1Q9ULE6 856 aa20.14■□□□□ 0.81
CAPRIN1-207ENST00000529307 NIP7Q9Y221 180 aaKnown RBP eCLIP20.14■□□□□ 0.81
CAPRIN1-207ENST00000529307 ZNF609O15014 1411 aa20.13■□□□□ 0.81
CAPRIN1-207ENST00000529307 HCLS1P14317 486 aaPredicted RBP20.13■□□□□ 0.81
CAPRIN1-207ENST00000529307 UTP14CQ5TAP6 766 aaKnown RBP20.13■□□□□ 0.81
CAPRIN1-207ENST00000529307 NEUROD6Q96NK8 337 aa20.13■□□□□ 0.81
CAPRIN1-207ENST00000529307 UTP14AQ9BVJ6 771 aaKnown RBP20.13■□□□□ 0.81
CAPRIN1-207ENST00000529307 CCNL1Q9UK58 526 aaPredicted RBP20.13■□□□□ 0.81
CAPRIN1-207ENST00000529307 SH3TC1Q8TE82 1336 aa20.13■□□□□ 0.81
CAPRIN1-207ENST00000529307 NCLP19338 710 aaKnown RBP20.13■□□□□ 0.81
CAPRIN1-207ENST00000529307 RABEP1Q15276 862 aa20.13■□□□□ 0.81
CAPRIN1-207ENST00000529307 AMIGO3Q86WK7 504 aa20.13■□□□□ 0.81
CAPRIN1-207ENST00000529307 BCORQ6W2J9 1755 aa20.12■□□□□ 0.81
CAPRIN1-207ENST00000529307 NTSR2O95665 410 aa20.12■□□□□ 0.81
CAPRIN1-207ENST00000529307 PARP10Q53GL7 1025 aa20.12■□□□□ 0.81
CAPRIN1-207ENST00000529307 FBXO3Q9UK99 471 aa20.12■□□□□ 0.81
CAPRIN1-207ENST00000529307 TAF7LQ5H9L4 462 aa20.11■□□□□ 0.81
CAPRIN1-207ENST00000529307 RC3H1Q5TC82 1133 aaKnown RBP20.11■□□□□ 0.81
CAPRIN1-207ENST00000529307 LSG1Q9H089 658 aaKnown RBP20.11■□□□□ 0.81
CAPRIN1-207ENST00000529307 DIAPH3Q9NSV4 1193 aa20.11■□□□□ 0.81
CAPRIN1-207ENST00000529307 CEP126Q9P2H0 1117 aa20.11■□□□□ 0.81
CAPRIN1-207ENST00000529307 MYH3P11055 1940 aa20.11■□□□□ 0.81
CAPRIN1-207ENST00000529307 A0A1B0GUL7 405 aa20.11■□□□□ 0.81
CAPRIN1-207ENST00000529307 BCL2L12Q9HB09 334 aa20.11■□□□□ 0.81
CAPRIN1-207ENST00000529307 RIPOR2Q9Y4F9 1068 aa20.11■□□□□ 0.81
CAPRIN1-207ENST00000529307 RIC1Q4ADV7 1423 aa20.11■□□□□ 0.81
CAPRIN1-207ENST00000529307 FAM227BQ96M60 508 aa20.1■□□□□ 0.81
CAPRIN1-207ENST00000529307 ANKRD18BA2A2Z9 1011 aa20.1■□□□□ 0.81
CAPRIN1-207ENST00000529307 RPS6KA4O75676 772 aa20.1■□□□□ 0.81
CAPRIN1-207ENST00000529307 CLEC4GQ6UXB4 293 aa20.1■□□□□ 0.81
CAPRIN1-207ENST00000529307 HAUS7Q99871 368 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms