RNA–Protein interactions for RNA: ENST00000529011.1

TRIM29-211, Transcript of tripartite motif containing 29, humanhuman

TSL 4

Gene TRIM29, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-211ENST00000529011 BEND3Q5T5X7 828 aa13.11□□□□□ -0.31
TRIM29-211ENST00000529011 SLC4A10Q6U841 1118 aa13.11□□□□□ -0.31
TRIM29-211ENST00000529011 UBE3BQ7Z3V4 1068 aa13.11□□□□□ -0.31
TRIM29-211ENST00000529011 SLC51AQ86UW1 340 aa13.11□□□□□ -0.31
TRIM29-211ENST00000529011 CELF1Q92879 486 aaKnown RBP13.11□□□□□ -0.31
TRIM29-211ENST00000529011 CCDC85AQ96PX6 553 aaPredicted RBP13.11□□□□□ -0.31
TRIM29-211ENST00000529011 BCL2L13Q9BXK5 485 aa13.11□□□□□ -0.31
TRIM29-211ENST00000529011 BRCA1P38398 1863 aaKnown RBP13.1□□□□□ -0.31
TRIM29-211ENST00000529011 RPS8P62241 208 aaKnown RBP13.1□□□□□ -0.31
TRIM29-211ENST00000529011 ALDH1L2Q3SY69 923 aa13.1□□□□□ -0.31
TRIM29-211ENST00000529011 SEC31BQ9NQW1 1179 aa13.1□□□□□ -0.31
TRIM29-211ENST00000529011 CDHR2Q9BYE9 1310 aa13.1□□□□□ -0.31
TRIM29-211ENST00000529011 SLX4Q8IY92 1834 aa13.09□□□□□ -0.31
TRIM29-211ENST00000529011 GLTPD2A6NH11 291 aa13.09□□□□□ -0.31
TRIM29-211ENST00000529011 CT47B1P0C2W7 299 aaPredicted RBP13.09□□□□□ -0.31
TRIM29-211ENST00000529011 CCDC152Q4G0S7 254 aa13.09□□□□□ -0.31
TRIM29-211ENST00000529011 DPY19L2Q6NUT2 758 aa13.09□□□□□ -0.31
TRIM29-211ENST00000529011 TTLL11Q8NHH1 800 aa13.09□□□□□ -0.31
TRIM29-211ENST00000529011 PSMD1Q99460 953 aa13.09□□□□□ -0.31
TRIM29-211ENST00000529011 SMC4Q9NTJ3 1288 aa13.09□□□□□ -0.31
TRIM29-211ENST00000529011 CHD4Q14839 1912 aa13.09□□□□□ -0.31
TRIM29-211ENST00000529011 TNRC6CQ9HCJ0 1690 aaKnown RBP13.08□□□□□ -0.31
TRIM29-211ENST00000529011 COL11A2P13942 1736 aaPredicted RBP13.08□□□□□ -0.32
TRIM29-211ENST00000529011 IARSP41252 1262 aaKnown RBP13.08□□□□□ -0.32
TRIM29-211ENST00000529011 CASP7P55210 303 aa13.08□□□□□ -0.32
TRIM29-211ENST00000529011 TMC4Q7Z404 712 aa13.08□□□□□ -0.32
TRIM29-211ENST00000529011 MPNDQ8N594 471 aa13.08□□□□□ -0.32
TRIM29-211ENST00000529011 SRCIN1Q9C0H9 1055 aa13.08□□□□□ -0.32
TRIM29-211ENST00000529011 RRAGCQ9HB90 399 aa13.08□□□□□ -0.32
TRIM29-211ENST00000529011 NMRK2Q9NPI5 230 aa13.08□□□□□ -0.32
TRIM29-211ENST00000529011 NSFL1CQ9UNZ2 370 aaKnown RBP13.08□□□□□ -0.32
TRIM29-211ENST00000529011 KDM2BQ8NHM5 1336 aa13.08□□□□□ -0.32
TRIM29-211ENST00000529011 ZC3H4Q9UPT8 1303 aaKnown RBP13.08□□□□□ -0.32
TRIM29-211ENST00000529011 ARFGEF1Q9Y6D6 1849 aa13.07□□□□□ -0.32
TRIM29-211ENST00000529011 ALDH1L1O75891 902 aa13.07□□□□□ -0.32
TRIM29-211ENST00000529011 CTSWP56202 376 aa13.07□□□□□ -0.32
TRIM29-211ENST00000529011 DPP8Q6V1X1 898 aaPredicted RBP13.07□□□□□ -0.32
TRIM29-211ENST00000529011 C9orf78Q9NZ63 289 aaPredicted RBP13.07□□□□□ -0.32
TRIM29-211ENST00000529011 FBXO3Q9UK99 471 aa13.07□□□□□ -0.32
TRIM29-211ENST00000529011 NOB1Q9ULX3 412 aaKnown RBP13.07□□□□□ -0.32
TRIM29-211ENST00000529011 PTPRCP08575 1304 aa13.07□□□□□ -0.32
TRIM29-211ENST00000529011 DLEC1Q9Y238 1755 aa13.07□□□□□ -0.32
TRIM29-211ENST00000529011 KIF3CO14782 793 aa13.06□□□□□ -0.32
TRIM29-211ENST00000529011 RARSP54136 660 aaKnown RBP13.06□□□□□ -0.32
TRIM29-211ENST00000529011 SUPT20HQ8NEM7 779 aa13.06□□□□□ -0.32
TRIM29-211ENST00000529011 JDP2Q8WYK2 163 aa13.06□□□□□ -0.32
TRIM29-211ENST00000529011 PLA2G12BQ9BX93 195 aa13.06□□□□□ -0.32
TRIM29-211ENST00000529011 RTFDC1Q9BY42 306 aaPredicted RBP13.06□□□□□ -0.32
TRIM29-211ENST00000529011 GREM2Q9H772 168 aa13.06□□□□□ -0.32
TRIM29-211ENST00000529011 GRM8O00222 908 aa13.05□□□□□ -0.32
TRIM29-211ENST00000529011 DDNO94850 711 aaPredicted RBP13.05□□□□□ -0.32
TRIM29-211ENST00000529011 CSF1RP07333 972 aa13.05□□□□□ -0.32
TRIM29-211ENST00000529011 C1QTNF8P60827 252 aa13.05□□□□□ -0.32
TRIM29-211ENST00000529011 ANKRD18AQ8IVF6 992 aa13.05□□□□□ -0.32
TRIM29-211ENST00000529011 LARGE2Q8N3Y3 721 aa13.05□□□□□ -0.32
TRIM29-211ENST00000529011 VPS33BQ9H267 617 aa13.05□□□□□ -0.32
TRIM29-211ENST00000529011 FZD9O00144 591 aa13.04□□□□□ -0.32
TRIM29-211ENST00000529011 PPIP5K2O43314 1243 aa13.04□□□□□ -0.32
TRIM29-211ENST00000529011 VEGFAP15692 232 aaPredicted RBP13.04□□□□□ -0.32
TRIM29-211ENST00000529011 BRPF1P55201 1214 aaPredicted RBP13.04□□□□□ -0.32
TRIM29-211ENST00000529011 GPSM2P81274 684 aa13.04□□□□□ -0.32
TRIM29-211ENST00000529011 FOXO4P98177 505 aa13.04□□□□□ -0.32
TRIM29-211ENST00000529011 AOC3Q16853 763 aa13.04□□□□□ -0.32
TRIM29-211ENST00000529011 CDC5LQ99459 802 aaKnown RBP13.04□□□□□ -0.32
TRIM29-211ENST00000529011 ANKRD36CQ5JPF3 1778 aa13.04□□□□□ -0.32
TRIM29-211ENST00000529011 ARFGEF2Q9Y6D5 1785 aa13.04□□□□□ -0.32
TRIM29-211ENST00000529011 SNED1Q8TER0 1413 aa13.04□□□□□ -0.32
TRIM29-211ENST00000529011 C6orf229H3BNL8 230 aa13.03□□□□□ -0.32
TRIM29-211ENST00000529011 NBPF7P0C2Y1 421 aaPredicted RBP13.03□□□□□ -0.32
TRIM29-211ENST00000529011 ANKIB1Q9P2G1 1089 aa13.03□□□□□ -0.32
TRIM29-211ENST00000529011 POLLQ9UGP5 575 aa13.03□□□□□ -0.32
TRIM29-211ENST00000529011 POTECB2RU33 542 aa13.02□□□□□ -0.33
TRIM29-211ENST00000529011 RIMBP2O15034 1052 aa13.02□□□□□ -0.33
TRIM29-211ENST00000529011 BCAR3O75815 825 aa13.02□□□□□ -0.33
TRIM29-211ENST00000529011 TOMM70O94826 608 aa13.02□□□□□ -0.33
TRIM29-211ENST00000529011 ITGA6P23229 1130 aa13.02□□□□□ -0.33
TRIM29-211ENST00000529011 EIF6P56537 245 aaKnown RBP13.02□□□□□ -0.33
TRIM29-211ENST00000529011 WASHC4Q2M389 1173 aa13.02□□□□□ -0.33
TRIM29-211ENST00000529011 EPHA10Q5JZY3 1008 aa13.02□□□□□ -0.33
TRIM29-211ENST00000529011 LMBR1LQ6UX01 489 aa13.02□□□□□ -0.33
TRIM29-211ENST00000529011 NIM1KQ8IY84 436 aa13.02□□□□□ -0.33
TRIM29-211ENST00000529011 C16orf71Q8IYS4 520 aaPredicted RBP13.02□□□□□ -0.33
TRIM29-211ENST00000529011 TBC1D16Q8TBP0 767 aa13.02□□□□□ -0.33
TRIM29-211ENST00000529011 API5Q9BZZ5 524 aaKnown RBP13.02□□□□□ -0.33
TRIM29-211ENST00000529011 BSDC1Q9NW68 430 aaPredicted RBP13.02□□□□□ -0.33
TRIM29-211ENST00000529011 CHMP3Q9Y3E7 222 aa13.02□□□□□ -0.33
TRIM29-211ENST00000529011 ZBED9Q6R2W3 1325 aa13.02□□□□□ -0.33
TRIM29-211ENST00000529011 ANKRD18BA2A2Z9 1011 aa13.01□□□□□ -0.33
TRIM29-211ENST00000529011 IGHMBP2P38935 993 aaKnown RBP13.01□□□□□ -0.33
TRIM29-211ENST00000529011 KIAA2012Q0VF49 1180 aa13.01□□□□□ -0.33
TRIM29-211ENST00000529011 IFIT5Q13325 482 aaKnown RBP13.01□□□□□ -0.33
TRIM29-211ENST00000529011 FAM161AQ3B820 660 aa13.01□□□□□ -0.33
TRIM29-211ENST00000529011 USP44Q9H0E7 712 aa13.01□□□□□ -0.33
TRIM29-211ENST00000529011 PODXL2Q9NZ53 605 aa13.01□□□□□ -0.33
TRIM29-211ENST00000529011 ZNRF3Q9ULT6 936 aa13.01□□□□□ -0.33
TRIM29-211ENST00000529011 MINPP1Q9UNW1 487 aa13.01□□□□□ -0.33
TRIM29-211ENST00000529011 ZNF541Q9H0D2 1346 aa13.01□□□□□ -0.33
TRIM29-211ENST00000529011 RTL9Q8NET4 1388 aa13□□□□□ -0.33
TRIM29-211ENST00000529011 CCT4P50991 539 aaKnown RBP13□□□□□ -0.33
TRIM29-211ENST00000529011 ARHGAP45Q92619 1136 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms