RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 GRAPQ13588 217 aa20.19■□□□□ 0.82
CLNS1A-210ENST00000528364 DPP8Q6V1X1 898 aaPredicted RBP20.19■□□□□ 0.82
CLNS1A-210ENST00000528364 GRAPLQ8TC17 118 aaPredicted RBP20.19■□□□□ 0.82
CLNS1A-210ENST00000528364 HYPKQ9NX55 129 aa20.19■□□□□ 0.82
CLNS1A-210ENST00000528364 PCNTO95613 3336 aa20.18■□□□□ 0.82
CLNS1A-210ENST00000528364 VEGFBP49765 207 aa20.18■□□□□ 0.82
CLNS1A-210ENST00000528364 CCDC184Q52MB2 194 aa20.18■□□□□ 0.82
CLNS1A-210ENST00000528364 PHAXQ9H814 394 aaKnown RBP20.18■□□□□ 0.82
CLNS1A-210ENST00000528364 ZNRF3Q9ULT6 936 aa20.18■□□□□ 0.82
CLNS1A-210ENST00000528364 CNTNAP1P78357 1384 aa20.18■□□□□ 0.82
CLNS1A-210ENST00000528364 SUPT20HQ8NEM7 779 aa20.17■□□□□ 0.82
CLNS1A-210ENST00000528364 TNS4Q8IZW8 715 aa20.16■□□□□ 0.82
CLNS1A-210ENST00000528364 C8orf58Q8NAV2 365 aa20.16■□□□□ 0.82
CLNS1A-210ENST00000528364 CELF1Q92879 486 aaKnown RBP20.16■□□□□ 0.82
CLNS1A-210ENST00000528364 VPS33BQ9H267 617 aa20.16■□□□□ 0.82
CLNS1A-210ENST00000528364 IFT57Q9NWB7 429 aa20.16■□□□□ 0.82
CLNS1A-210ENST00000528364 RAD17O75943 681 aa20.15■□□□□ 0.82
CLNS1A-210ENST00000528364 GNAI1P63096 354 aa20.15■□□□□ 0.82
CLNS1A-210ENST00000528364 KIAA2012Q0VF49 1180 aa20.15■□□□□ 0.82
CLNS1A-210ENST00000528364 RIC3Q7Z5B4 369 aa20.15■□□□□ 0.82
CLNS1A-210ENST00000528364 CAPN15O75808 1086 aa20.14■□□□□ 0.81
CLNS1A-210ENST00000528364 GMPSP49915 693 aaPredicted RBP20.14■□□□□ 0.81
CLNS1A-210ENST00000528364 SF3B3Q15393 1217 aaKnown RBP20.14■□□□□ 0.81
CLNS1A-210ENST00000528364 JARID2Q92833 1246 aaPredicted RBP20.14■□□□□ 0.81
CLNS1A-210ENST00000528364 GPRC5DQ9NZD1 345 aa20.14■□□□□ 0.81
CLNS1A-210ENST00000528364 YDJCA8MPS7 323 aa20.13■□□□□ 0.81
CLNS1A-210ENST00000528364 TRAF5O00463 557 aa20.13■□□□□ 0.81
CLNS1A-210ENST00000528364 IRS4O14654 1257 aaPredicted RBP20.13■□□□□ 0.81
CLNS1A-210ENST00000528364 TRIM28Q13263 835 aaKnown RBP20.13■□□□□ 0.81
CLNS1A-210ENST00000528364 DEFB115Q30KQ5 88 aa20.13■□□□□ 0.81
CLNS1A-210ENST00000528364 CIAPIN1Q6FI81 312 aa20.13■□□□□ 0.81
CLNS1A-210ENST00000528364 USP50Q70EL3 339 aaPredicted RBP20.13■□□□□ 0.81
CLNS1A-210ENST00000528364 SHTN1A0MZ66 631 aa20.12■□□□□ 0.81
CLNS1A-210ENST00000528364 FOXN1O15353 648 aa20.12■□□□□ 0.81
CLNS1A-210ENST00000528364 TSPYL6Q8N831 410 aa20.12■□□□□ 0.81
CLNS1A-210ENST00000528364 MYD88Q99836 296 aa20.12■□□□□ 0.81
CLNS1A-210ENST00000528364 NSFL1CQ9UNZ2 370 aaKnown RBP20.12■□□□□ 0.81
CLNS1A-210ENST00000528364 DDX60Q8IY21 1712 aaKnown RBP20.12■□□□□ 0.81
CLNS1A-210ENST00000528364 COL4A1P02462 1669 aa20.12■□□□□ 0.81
CLNS1A-210ENST00000528364 GPSM2P81274 684 aa20.11■□□□□ 0.81
CLNS1A-210ENST00000528364 ABT1Q9ULW3 272 aaKnown RBP20.11■□□□□ 0.81
CLNS1A-210ENST00000528364 RASSF10A6NK89 507 aa20.1■□□□□ 0.81
CLNS1A-210ENST00000528364 RIMBP2O15034 1052 aa20.1■□□□□ 0.81
CLNS1A-210ENST00000528364 HIRAP54198 1017 aaPredicted RBP20.1■□□□□ 0.81
CLNS1A-210ENST00000528364 GOLGA2Q08379 1002 aa20.1■□□□□ 0.81
CLNS1A-210ENST00000528364 CST9Q5W186 159 aa20.1■□□□□ 0.81
CLNS1A-210ENST00000528364 GPR101Q96P66 508 aaPredicted RBP20.1■□□□□ 0.81
CLNS1A-210ENST00000528364 SEC31BQ9NQW1 1179 aa20.1■□□□□ 0.81
CLNS1A-210ENST00000528364 ADARB2Q9NS39 739 aaKnown RBP20.1■□□□□ 0.81
CLNS1A-210ENST00000528364 POLLQ9UGP5 575 aa20.1■□□□□ 0.81
CLNS1A-210ENST00000528364 RPS8P62241 208 aaKnown RBP20.09■□□□□ 0.81
CLNS1A-210ENST00000528364 CALD1Q05682 793 aaKnown RBP20.09■□□□□ 0.81
CLNS1A-210ENST00000528364 TMC4Q7Z404 712 aa20.09■□□□□ 0.81
CLNS1A-210ENST00000528364 BCL2L13Q9BXK5 485 aa20.09■□□□□ 0.81
CLNS1A-210ENST00000528364 KCNQ5Q9NR82 932 aa20.09■□□□□ 0.81
CLNS1A-210ENST00000528364 C6orf229H3BNL8 230 aa20.08■□□□□ 0.81
CLNS1A-210ENST00000528364 TNIP1Q15025 636 aa20.08■□□□□ 0.81
CLNS1A-210ENST00000528364 WASHC4Q2M389 1173 aa20.08■□□□□ 0.81
CLNS1A-210ENST00000528364 ZBTB38Q8NAP3 1195 aaPredicted RBP20.08■□□□□ 0.81
CLNS1A-210ENST00000528364 TSR2Q969E8 191 aaKnown RBP20.08■□□□□ 0.81
CLNS1A-210ENST00000528364 DBNDD1Q9H9R9 158 aa20.08■□□□□ 0.81
CLNS1A-210ENST00000528364 ZBTB12Q9Y330 459 aaPredicted RBP20.08■□□□□ 0.81
CLNS1A-210ENST00000528364 DUOX1Q9NRD9 1551 aa20.08■□□□□ 0.8
CLNS1A-210ENST00000528364 WDR33Q9C0J8 1336 aaKnown RBP20.07■□□□□ 0.8
CLNS1A-210ENST00000528364 DOK7Q18PE1 504 aa20.07■□□□□ 0.8
CLNS1A-210ENST00000528364 TRPM4Q8TD43 1214 aa20.07■□□□□ 0.8
CLNS1A-210ENST00000528364 CCDC85AQ96PX6 553 aaPredicted RBP20.07■□□□□ 0.8
CLNS1A-210ENST00000528364 GLIS2Q9BZE0 524 aaPredicted RBP20.07■□□□□ 0.8
CLNS1A-210ENST00000528364 WBP1LQ9NX94 342 aa20.07■□□□□ 0.8
CLNS1A-210ENST00000528364 CNOT7Q9UIV1 285 aaKnown RBP20.07■□□□□ 0.8
CLNS1A-210ENST00000528364 METTL22Q9BUU2 404 aaPredicted RBP20.06■□□□□ 0.8
CLNS1A-210ENST00000528364 PSMD14O00487 310 aa20.05■□□□□ 0.8
CLNS1A-210ENST00000528364 CCDC30Q5VVM6 783 aa20.05■□□□□ 0.8
CLNS1A-210ENST00000528364 TBC1D16Q8TBP0 767 aa20.05■□□□□ 0.8
CLNS1A-210ENST00000528364 PCCAP05165 728 aaPredicted RBP20.04■□□□□ 0.8
CLNS1A-210ENST00000528364 GRM1Q13255 1194 aa20.04■□□□□ 0.8
CLNS1A-210ENST00000528364 CYP4F22Q6NT55 531 aa20.04■□□□□ 0.8
CLNS1A-210ENST00000528364 DLK2Q6UY11 383 aa20.04■□□□□ 0.8
CLNS1A-210ENST00000528364 PAXIP1Q6ZW49 1069 aaPredicted RBP20.04■□□□□ 0.8
CLNS1A-210ENST00000528364 MICALL2Q8IY33 904 aa20.04■□□□□ 0.8
CLNS1A-210ENST00000528364 CCDC191Q8NCU4 936 aa20.04■□□□□ 0.8
CLNS1A-210ENST00000528364 AIDAQ96BJ3 306 aa20.04■□□□□ 0.8
CLNS1A-210ENST00000528364 CWC25Q9NXE8 425 aaPredicted RBP20.04■□□□□ 0.8
CLNS1A-210ENST00000528364 PGAP2Q9UHJ9 254 aa20.04■□□□□ 0.8
CLNS1A-210ENST00000528364 MAP3K2Q9Y2U5 619 aa20.04■□□□□ 0.8
CLNS1A-210ENST00000528364 LRRC37AA6NMS7 1700 aa20.03■□□□□ 0.8
CLNS1A-210ENST00000528364 G2E3Q7L622 706 aa20.03■□□□□ 0.8
CLNS1A-210ENST00000528364 SAMD7Q7Z3H4 446 aa20.03■□□□□ 0.8
CLNS1A-210ENST00000528364 PI4KAP2A4QPH2 592 aa20.02■□□□□ 0.8
CLNS1A-210ENST00000528364 H7C1D1 291 aa20.02■□□□□ 0.8
CLNS1A-210ENST00000528364 ECE2O60344 883 aa20.02■□□□□ 0.8
CLNS1A-210ENST00000528364 PDE8AO60658 829 aa20.02■□□□□ 0.8
CLNS1A-210ENST00000528364 CELF2O95319 508 aaKnown RBP20.02■□□□□ 0.8
CLNS1A-210ENST00000528364 CTCFP49711 727 aaPredicted RBP20.02■□□□□ 0.8
CLNS1A-210ENST00000528364 LBX1P52954 281 aa20.02■□□□□ 0.8
CLNS1A-210ENST00000528364 WWC1Q8IX03 1113 aa20.02■□□□□ 0.8
CLNS1A-210ENST00000528364 PI4KAP1Q8N8J0 262 aa20.02■□□□□ 0.8
CLNS1A-210ENST00000528364 CAPNS2Q96L46 248 aa20.02■□□□□ 0.8
CLNS1A-210ENST00000528364 TLL2Q9Y6L7 1015 aa20.02■□□□□ 0.8
CLNS1A-210ENST00000528364 TRPM7Q96QT4 1865 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms