RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 GNAI1P63096 354 aa29.01■■■□□ 2.23
TRAPPC4-208ENST00000527680 RIC3Q7Z5B4 369 aa29.01■■■□□ 2.23
TRAPPC4-208ENST00000527680 TNS4Q8IZW8 715 aa29.01■■■□□ 2.23
TRAPPC4-208ENST00000527680 ISCA1Q9BUE6 129 aa29.01■■■□□ 2.23
TRAPPC4-208ENST00000527680 RTFDC1Q9BY42 306 aaPredicted RBP29.01■■■□□ 2.23
TRAPPC4-208ENST00000527680 CNTNAP1P78357 1384 aa29.01■■■□□ 2.23
TRAPPC4-208ENST00000527680 LAMB2P55268 1798 aa28.99■■■□□ 2.23
TRAPPC4-208ENST00000527680 CXCL9Q07325 125 aa28.99■■■□□ 2.23
TRAPPC4-208ENST00000527680 IFT57Q9NWB7 429 aa28.99■■■□□ 2.23
TRAPPC4-208ENST00000527680 ZNF853P0CG23 659 aa28.98■■■□□ 2.23
TRAPPC4-208ENST00000527680 USP50Q70EL3 339 aaPredicted RBP28.98■■■□□ 2.23
TRAPPC4-208ENST00000527680 TMC4Q7Z404 712 aa28.98■■■□□ 2.23
TRAPPC4-208ENST00000527680 VEGFBP49765 207 aa28.97■■■□□ 2.23
TRAPPC4-208ENST00000527680 GOLGA2Q08379 1002 aa28.97■■■□□ 2.23
TRAPPC4-208ENST00000527680 DEFB115Q30KQ5 88 aa28.97■■■□□ 2.23
TRAPPC4-208ENST00000527680 ABT1Q9ULW3 272 aaKnown RBP28.97■■■□□ 2.23
TRAPPC4-208ENST00000527680 TAF1P21675 1872 aa28.96■■■□□ 2.23
TRAPPC4-208ENST00000527680 KIAA2012Q0VF49 1180 aa28.96■■■□□ 2.23
TRAPPC4-208ENST00000527680 ADAMTSL1Q8N6G6 1762 aa28.96■■■□□ 2.23
TRAPPC4-208ENST00000527680 SF3B3Q15393 1217 aaKnown RBP28.95■■■□□ 2.22
TRAPPC4-208ENST00000527680 CIAPIN1Q6FI81 312 aa28.95■■■□□ 2.22
TRAPPC4-208ENST00000527680 BCL2L13Q9BXK5 485 aa28.95■■■□□ 2.22
TRAPPC4-208ENST00000527680 PHAXQ9H814 394 aaKnown RBP28.95■■■□□ 2.22
TRAPPC4-208ENST00000527680 GPRC5DQ9NZD1 345 aa28.95■■■□□ 2.22
TRAPPC4-208ENST00000527680 NSFL1CQ9UNZ2 370 aaKnown RBP28.95■■■□□ 2.22
TRAPPC4-208ENST00000527680 IRS4O14654 1257 aaPredicted RBP28.94■■■□□ 2.22
TRAPPC4-208ENST00000527680 CAPN15O75808 1086 aa28.94■■■□□ 2.22
TRAPPC4-208ENST00000527680 RAD17O75943 681 aa28.94■■■□□ 2.22
TRAPPC4-208ENST00000527680 TNIP1Q15025 636 aa28.94■■■□□ 2.22
TRAPPC4-208ENST00000527680 ADARB2Q9NS39 739 aaKnown RBP28.94■■■□□ 2.22
TRAPPC4-208ENST00000527680 GMPSP49915 693 aaPredicted RBP28.93■■■□□ 2.22
TRAPPC4-208ENST00000527680 TRIM28Q13263 835 aaKnown RBP28.93■■■□□ 2.22
TRAPPC4-208ENST00000527680 CELF1Q92879 486 aaKnown RBP28.93■■■□□ 2.22
TRAPPC4-208ENST00000527680 LTBP1Q14766 1721 aa28.92■■■□□ 2.22
TRAPPC4-208ENST00000527680 AIDAQ96BJ3 306 aa28.92■■■□□ 2.22
TRAPPC4-208ENST00000527680 CHMP4AQ9BY43 222 aa28.92■■■□□ 2.22
TRAPPC4-208ENST00000527680 WASHC4Q2M389 1173 aa28.91■■■□□ 2.22
TRAPPC4-208ENST00000527680 C8orf58Q8NAV2 365 aa28.91■■■□□ 2.22
TRAPPC4-208ENST00000527680 MYD88Q99836 296 aa28.91■■■□□ 2.22
TRAPPC4-208ENST00000527680 C6orf229H3BNL8 230 aa28.9■■■□□ 2.22
TRAPPC4-208ENST00000527680 HSP90B1P14625 803 aaKnown RBP28.9■■■□□ 2.22
TRAPPC4-208ENST00000527680 FMR1Q06787 632 aaKnown RBP eCLIP28.9■■■□□ 2.22
TRAPPC4-208ENST00000527680 RASSF10A6NK89 507 aa28.89■■■□□ 2.22
TRAPPC4-208ENST00000527680 RIMBP2O15034 1052 aa28.89■■■□□ 2.22
TRAPPC4-208ENST00000527680 CCDC30Q5VVM6 783 aa28.89■■■□□ 2.22
TRAPPC4-208ENST00000527680 ZBTB38Q8NAP3 1195 aaPredicted RBP28.89■■■□□ 2.22
TRAPPC4-208ENST00000527680 RPS8P62241 208 aaKnown RBP28.88■■■□□ 2.21
TRAPPC4-208ENST00000527680 PAXIP1Q6ZW49 1069 aaPredicted RBP28.88■■■□□ 2.21
TRAPPC4-208ENST00000527680 DDX60Q8IY21 1712 aaKnown RBP28.88■■■□□ 2.21
TRAPPC4-208ENST00000527680 TRAF5O00463 557 aa28.87■■■□□ 2.21
TRAPPC4-208ENST00000527680 FOXN1O15353 648 aa28.87■■■□□ 2.21
TRAPPC4-208ENST00000527680 DDX58O95786 925 aaKnown RBP28.87■■■□□ 2.21
TRAPPC4-208ENST00000527680 CNOT7Q9UIV1 285 aaKnown RBP28.86■■■□□ 2.21
TRAPPC4-208ENST00000527680 WDR33Q9C0J8 1336 aaKnown RBP28.86■■■□□ 2.21
TRAPPC4-208ENST00000527680 YDJCA8MPS7 323 aa28.85■■■□□ 2.21
TRAPPC4-208ENST00000527680 H7C1D1 291 aa28.85■■■□□ 2.21
TRAPPC4-208ENST00000527680 GPSM2P81274 684 aa28.85■■■□□ 2.21
TRAPPC4-208ENST00000527680 CCDC191Q8NCU4 936 aa28.85■■■□□ 2.21
TRAPPC4-208ENST00000527680 DBNDD1Q9H9R9 158 aa28.85■■■□□ 2.21
TRAPPC4-208ENST00000527680 GRM1Q13255 1194 aa28.84■■■□□ 2.21
TRAPPC4-208ENST00000527680 JARID2Q92833 1246 aaPredicted RBP28.84■■■□□ 2.21
TRAPPC4-208ENST00000527680 EYA3Q99504 573 aa28.84■■■□□ 2.21
TRAPPC4-208ENST00000527680 CWC25Q9NXE8 425 aaPredicted RBP28.84■■■□□ 2.21
TRAPPC4-208ENST00000527680 POLLQ9UGP5 575 aa28.84■■■□□ 2.21
TRAPPC4-208ENST00000527680 CTCFP49711 727 aaPredicted RBP28.83■■■□□ 2.21
TRAPPC4-208ENST00000527680 CCDC184Q52MB2 194 aa28.83■■■□□ 2.21
TRAPPC4-208ENST00000527680 CST9Q5W186 159 aa28.83■■■□□ 2.21
TRAPPC4-208ENST00000527680 CDHR2Q9BYE9 1310 aa28.83■■■□□ 2.21
TRAPPC4-208ENST00000527680 G3V3G9 751 aa28.82■■■□□ 2.2
TRAPPC4-208ENST00000527680 DCAF8Q5TAQ9 597 aa28.82■■■□□ 2.2
TRAPPC4-208ENST00000527680 TSPYL6Q8N831 410 aa28.82■■■□□ 2.2
TRAPPC4-208ENST00000527680 METTL22Q9BUU2 404 aaPredicted RBP28.82■■■□□ 2.2
TRAPPC4-208ENST00000527680 SEC31BQ9NQW1 1179 aa28.82■■■□□ 2.2
TRAPPC4-208ENST00000527680 WBP1LQ9NX94 342 aa28.82■■■□□ 2.2
TRAPPC4-208ENST00000527680 ZBTB12Q9Y330 459 aaPredicted RBP28.82■■■□□ 2.2
TRAPPC4-208ENST00000527680 PDE8AO60658 829 aa28.81■■■□□ 2.2
TRAPPC4-208ENST00000527680 PCCAP05165 728 aaPredicted RBP28.81■■■□□ 2.2
TRAPPC4-208ENST00000527680 DOK7Q18PE1 504 aa28.81■■■□□ 2.2
TRAPPC4-208ENST00000527680 CCDC152Q4G0S7 254 aa28.81■■■□□ 2.2
TRAPPC4-208ENST00000527680 TSR2Q969E8 191 aaKnown RBP28.81■■■□□ 2.2
TRAPPC4-208ENST00000527680 CCDC85AQ96PX6 553 aaPredicted RBP28.81■■■□□ 2.2
TRAPPC4-208ENST00000527680 ZC3H12CQ9C0D7 883 aaKnown RBP28.81■■■□□ 2.2
TRAPPC4-208ENST00000527680 ANKIB1Q9P2G1 1089 aa28.81■■■□□ 2.2
TRAPPC4-208ENST00000527680 MAP3K2Q9Y2U5 619 aa28.81■■■□□ 2.2
TRAPPC4-208ENST00000527680 PSMD14O00487 310 aa28.8■■■□□ 2.2
TRAPPC4-208ENST00000527680 ECE1P42892 770 aa28.8■■■□□ 2.2
TRAPPC4-208ENST00000527680 MAP2K1Q02750 393 aaPredicted RBP28.8■■■□□ 2.2
TRAPPC4-208ENST00000527680 MICALL2Q8IY33 904 aa28.8■■■□□ 2.2
TRAPPC4-208ENST00000527680 ZC3H15Q8WU90 426 aaKnown RBP28.8■■■□□ 2.2
TRAPPC4-208ENST00000527680 STK31Q9BXU1 1019 aa28.8■■■□□ 2.2
TRAPPC4-208ENST00000527680 GLIS2Q9BZE0 524 aaPredicted RBP28.8■■■□□ 2.2
TRAPPC4-208ENST00000527680 CELF2O95319 508 aaKnown RBP28.79■■■□□ 2.2
TRAPPC4-208ENST00000527680 HIRAP54198 1017 aaPredicted RBP28.79■■■□□ 2.2
TRAPPC4-208ENST00000527680 TBC1D16Q8TBP0 767 aa28.79■■■□□ 2.2
TRAPPC4-208ENST00000527680 CAPNS2Q96L46 248 aa28.79■■■□□ 2.2
TRAPPC4-208ENST00000527680 TRPM7Q96QT4 1865 aa28.78■■■□□ 2.2
TRAPPC4-208ENST00000527680 SHTN1A0MZ66 631 aa28.78■■■□□ 2.2
TRAPPC4-208ENST00000527680 ECE2O60344 883 aa28.78■■■□□ 2.2
TRAPPC4-208ENST00000527680 CYP4F22Q6NT55 531 aa28.78■■■□□ 2.2
TRAPPC4-208ENST00000527680 TRPM4Q8TD43 1214 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms