RNA–Protein interactions for RNA: ENST00000525987.5

SDHD-211, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 4

Gene SDHD, Length 968 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-211ENST00000525987 EAPPQ56P03 285 aaPredicted RBP16.3■□□□□ 0.2
SDHD-211ENST00000525987 SP8Q8IXZ3 490 aa16.3■□□□□ 0.2
SDHD-211ENST00000525987 LARGE2Q8N3Y3 721 aa16.3■□□□□ 0.2
SDHD-211ENST00000525987 GRAPLQ8TC17 118 aaPredicted RBP16.3■□□□□ 0.2
SDHD-211ENST00000525987 CELF1Q92879 486 aaKnown RBP16.3■□□□□ 0.2
SDHD-211ENST00000525987 CREBZFQ9NS37 354 aa16.3■□□□□ 0.2
SDHD-211ENST00000525987 HYPKQ9NX55 129 aa16.3■□□□□ 0.2
SDHD-211ENST00000525987 PPIP5K2O43314 1243 aa16.29■□□□□ 0.2
SDHD-211ENST00000525987 GNAI1P63096 354 aa16.29■□□□□ 0.2
SDHD-211ENST00000525987 TRIM28Q13263 835 aaKnown RBP16.29■□□□□ 0.2
SDHD-211ENST00000525987 GRIPAP1Q4V328 841 aa16.29■□□□□ 0.2
SDHD-211ENST00000525987 COL13A1Q5TAT6 717 aaPredicted RBP16.29■□□□□ 0.2
SDHD-211ENST00000525987 MAP1SQ66K74 1059 aaPredicted RBP16.29■□□□□ 0.2
SDHD-211ENST00000525987 JDP2Q8WYK2 163 aa16.29■□□□□ 0.2
SDHD-211ENST00000525987 GJA3Q9Y6H8 435 aa16.29■□□□□ 0.2
SDHD-211ENST00000525987 YDJCA8MPS7 323 aa16.28■□□□□ 0.2
SDHD-211ENST00000525987 BBOX1O75936 387 aa16.28■□□□□ 0.2
SDHD-211ENST00000525987 CXCL9Q07325 125 aa16.28■□□□□ 0.2
SDHD-211ENST00000525987 SF3B3Q15393 1217 aaKnown RBP16.28■□□□□ 0.2
SDHD-211ENST00000525987 RTL5Q5HYW3 569 aaPredicted RBP16.28■□□□□ 0.2
SDHD-211ENST00000525987 MKRN1Q9UHC7 482 aaKnown RBP16.28■□□□□ 0.2
SDHD-211ENST00000525987 CNTNAP1P78357 1384 aa16.27■□□□□ 0.2
SDHD-211ENST00000525987 EIF6P56537 245 aaKnown RBP16.27■□□□□ 0.2
SDHD-211ENST00000525987 TSR2Q969E8 191 aaKnown RBP16.27■□□□□ 0.2
SDHD-211ENST00000525987 THSD7BQ9C0I4 1608 aa16.27■□□□□ 0.19
SDHD-211ENST00000525987 SHTN1A0MZ66 631 aa16.26■□□□□ 0.19
SDHD-211ENST00000525987 HSPA1AP0DMV8 641 aaKnown RBP16.26■□□□□ 0.19
SDHD-211ENST00000525987 HSPA1BP0DMV9 641 aaKnown RBP16.26■□□□□ 0.19
SDHD-211ENST00000525987 KIAA2012Q0VF49 1180 aa16.26■□□□□ 0.19
SDHD-211ENST00000525987 DDX46Q7L014 1031 aaKnown RBP16.26■□□□□ 0.19
SDHD-211ENST00000525987 CNTROBQ8N137 903 aa16.26■□□□□ 0.19
SDHD-211ENST00000525987 MPNDQ8N594 471 aa16.26■□□□□ 0.19
SDHD-211ENST00000525987 JARID2Q92833 1246 aaPredicted RBP16.26■□□□□ 0.19
SDHD-211ENST00000525987 A0A1B0GUL6 1792 aa16.26■□□□□ 0.19
SDHD-211ENST00000525987 DPP8Q6V1X1 898 aaPredicted RBP16.25■□□□□ 0.19
SDHD-211ENST00000525987 NIM1KQ8IY84 436 aa16.25■□□□□ 0.19
SDHD-211ENST00000525987 VPS33BQ9H267 617 aa16.25■□□□□ 0.19
SDHD-211ENST00000525987 IRS4O14654 1257 aaPredicted RBP16.24■□□□□ 0.19
SDHD-211ENST00000525987 PNMA8AQ86V59 439 aaPredicted RBP16.24■□□□□ 0.19
SDHD-211ENST00000525987 WWC1Q8IX03 1113 aa16.24■□□□□ 0.19
SDHD-211ENST00000525987 MYD88Q99836 296 aa16.24■□□□□ 0.19
SDHD-211ENST00000525987 SEC31BQ9NQW1 1179 aa16.24■□□□□ 0.19
SDHD-211ENST00000525987 GPRC5DQ9NZD1 345 aa16.24■□□□□ 0.19
SDHD-211ENST00000525987 POLLQ9UGP5 575 aa16.24■□□□□ 0.19
SDHD-211ENST00000525987 ZNRF3Q9ULT6 936 aa16.24■□□□□ 0.19
SDHD-211ENST00000525987 CLEC11AQ9Y240 323 aa16.24■□□□□ 0.19
SDHD-211ENST00000525987 GPSM2P81274 684 aa16.23■□□□□ 0.19
SDHD-211ENST00000525987 CCDC27Q2M243 656 aa16.23■□□□□ 0.19
SDHD-211ENST00000525987 G2E3Q7L622 706 aa16.23■□□□□ 0.19
SDHD-211ENST00000525987 RIC3Q7Z5B4 369 aa16.23■□□□□ 0.19
SDHD-211ENST00000525987 GPR101Q96P66 508 aaPredicted RBP16.23■□□□□ 0.19
SDHD-211ENST00000525987 TMEM88BA6NKF7 163 aa16.22■□□□□ 0.19
SDHD-211ENST00000525987 IGKV5-2P06315 115 aa16.22■□□□□ 0.19
SDHD-211ENST00000525987 VEGFBP49765 207 aa16.22■□□□□ 0.19
SDHD-211ENST00000525987 GMPSP49915 693 aaPredicted RBP16.22■□□□□ 0.19
SDHD-211ENST00000525987 HIRAP54198 1017 aaPredicted RBP16.22■□□□□ 0.19
SDHD-211ENST00000525987 ZBTB38Q8NAP3 1195 aaPredicted RBP16.22■□□□□ 0.19
SDHD-211ENST00000525987 METTL22Q9BUU2 404 aaPredicted RBP16.22■□□□□ 0.19
SDHD-211ENST00000525987 KCNQ5Q9NR82 932 aa16.22■□□□□ 0.19
SDHD-211ENST00000525987 TRAF5O00463 557 aa16.21■□□□□ 0.19
SDHD-211ENST00000525987 RAD17O75943 681 aa16.21■□□□□ 0.19
SDHD-211ENST00000525987 GOLGA2Q08379 1002 aa16.21■□□□□ 0.19
SDHD-211ENST00000525987 CST9Q5W186 159 aa16.21■□□□□ 0.19
SDHD-211ENST00000525987 SUPT20HQ8NEM7 779 aa16.21■□□□□ 0.19
SDHD-211ENST00000525987 RTL9Q8NET4 1388 aa16.21■□□□□ 0.19
SDHD-211ENST00000525987 PCCAP05165 728 aaPredicted RBP16.2■□□□□ 0.18
SDHD-211ENST00000525987 CALD1Q05682 793 aaKnown RBP16.2■□□□□ 0.18
SDHD-211ENST00000525987 USP50Q70EL3 339 aaPredicted RBP16.2■□□□□ 0.18
SDHD-211ENST00000525987 CCDC191Q8NCU4 936 aa16.2■□□□□ 0.18
SDHD-211ENST00000525987 TRPM4Q8TD43 1214 aa16.2■□□□□ 0.18
SDHD-211ENST00000525987 MAP3K2Q9Y2U5 619 aa16.2■□□□□ 0.18
SDHD-211ENST00000525987 WTIPA6NIX2 430 aaPredicted RBP16.19■□□□□ 0.18
SDHD-211ENST00000525987 RASSF10A6NK89 507 aa16.19■□□□□ 0.18
SDHD-211ENST00000525987 LMOD1P29536 600 aaPredicted RBP16.19■□□□□ 0.18
SDHD-211ENST00000525987 CCDC30Q5VVM6 783 aa16.19■□□□□ 0.18
SDHD-211ENST00000525987 CIAPIN1Q6FI81 312 aa16.19■□□□□ 0.18
SDHD-211ENST00000525987 TMC4Q7Z404 712 aa16.19■□□□□ 0.18
SDHD-211ENST00000525987 DBNDD1Q9H9R9 158 aa16.19■□□□□ 0.18
SDHD-211ENST00000525987 SPINK5Q9NQ38 1064 aaPredicted RBP16.19■□□□□ 0.18
SDHD-211ENST00000525987 PGAP2Q9UHJ9 254 aa16.19■□□□□ 0.18
SDHD-211ENST00000525987 NSFL1CQ9UNZ2 370 aaKnown RBP16.19■□□□□ 0.18
SDHD-211ENST00000525987 PI4KAP2A4QPH2 592 aa16.18■□□□□ 0.18
SDHD-211ENST00000525987 RIMBP2O15034 1052 aa16.18■□□□□ 0.18
SDHD-211ENST00000525987 EGFRP00533 1210 aa16.18■□□□□ 0.18
SDHD-211ENST00000525987 RPS8P62241 208 aaKnown RBP16.18■□□□□ 0.18
SDHD-211ENST00000525987 PI4KAP1Q8N8J0 262 aa16.18■□□□□ 0.18
SDHD-211ENST00000525987 TBC1D16Q8TBP0 767 aa16.18■□□□□ 0.18
SDHD-211ENST00000525987 CCDC85AQ96PX6 553 aaPredicted RBP16.18■□□□□ 0.18
SDHD-211ENST00000525987 ADARB2Q9NS39 739 aaKnown RBP16.18■□□□□ 0.18
SDHD-211ENST00000525987 CWC25Q9NXE8 425 aaPredicted RBP16.18■□□□□ 0.18
SDHD-211ENST00000525987 ZBTB12Q9Y330 459 aaPredicted RBP16.18■□□□□ 0.18
SDHD-211ENST00000525987 ZNF316A6NFI3 1004 aaPredicted RBP16.17■□□□□ 0.18
SDHD-211ENST00000525987 PSMD14O00487 310 aa16.17■□□□□ 0.18
SDHD-211ENST00000525987 FOXN1O15353 648 aa16.17■□□□□ 0.18
SDHD-211ENST00000525987 CWF19L2Q2TBE0 894 aaKnown RBP16.17■□□□□ 0.18
SDHD-211ENST00000525987 TWISTNBQ3B726 338 aaPredicted RBP16.17■□□□□ 0.18
SDHD-211ENST00000525987 DLK2Q6UY11 383 aa16.17■□□□□ 0.18
SDHD-211ENST00000525987 KSR2Q6VAB6 950 aa16.17■□□□□ 0.18
SDHD-211ENST00000525987 MRS2Q9HD23 443 aa16.17■□□□□ 0.18
SDHD-211ENST00000525987 PODXL2Q9NZ53 605 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms