RNA–Protein interactions for RNA: ENST00000525495.6

CDC27-202, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 1,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-202ENST00000525495 FKBP4Q02790 459 aaKnown RBP eCLIP15.18■□□□□ 0.02
CDC27-202ENST00000525495 TRMT2AQ8IZ69 625 aaKnown RBP15.18■□□□□ 0.02
CDC27-202ENST00000525495 ZC3H4Q9UPT8 1303 aaKnown RBP15.17■□□□□ 0.02
CDC27-202ENST00000525495 NEURL1BA8MQ27 555 aa15.17■□□□□ 0.02
CDC27-202ENST00000525495 SF3B3Q15393 1217 aaKnown RBP15.17■□□□□ 0.02
CDC27-202ENST00000525495 RTKN2Q8IZC4 609 aa15.17■□□□□ 0.02
CDC27-202ENST00000525495 NMRK2Q9NPI5 230 aa15.17■□□□□ 0.02
CDC27-202ENST00000525495 ZNF277Q9NRM2 450 aaPredicted RBP15.17■□□□□ 0.02
CDC27-202ENST00000525495 F6X3S4 739 aa15.16■□□□□ 0.02
CDC27-202ENST00000525495 KIF3CO14782 793 aa15.16■□□□□ 0.02
CDC27-202ENST00000525495 NEXNQ0ZGT2 675 aa15.16■□□□□ 0.02
CDC27-202ENST00000525495 DDX46Q7L014 1031 aaKnown RBP15.16■□□□□ 0.02
CDC27-202ENST00000525495 DNAAF4Q8WXU2 420 aa15.16■□□□□ 0.02
CDC27-202ENST00000525495 LRRC37AA6NMS7 1700 aa15.15■□□□□ 0.02
CDC27-202ENST00000525495 GRAPQ13588 217 aa15.15■□□□□ 0.02
CDC27-202ENST00000525495 CC2D2BQ6DHV5 1058 aa15.15■□□□□ 0.02
CDC27-202ENST00000525495 GRAPLQ8TC17 118 aaPredicted RBP15.15■□□□□ 0.02
CDC27-202ENST00000525495 ATP6V0A2Q9Y487 856 aa15.15■□□□□ 0.02
CDC27-202ENST00000525495 MYH3P11055 1940 aa15.15■□□□□ 0.02
CDC27-202ENST00000525495 COL4A5P29400 1685 aa15.15■□□□□ 0.02
CDC27-202ENST00000525495 BBOX1O75936 387 aa15.14■□□□□ 0.01
CDC27-202ENST00000525495 CELF1Q92879 486 aaKnown RBP15.14■□□□□ 0.01
CDC27-202ENST00000525495 PSMD1Q99460 953 aa15.14■□□□□ 0.01
CDC27-202ENST00000525495 CDHR2Q9BYE9 1310 aa15.14■□□□□ 0.01
CDC27-202ENST00000525495 GLTPD2A6NH11 291 aa15.14■□□□□ 0.01
CDC27-202ENST00000525495 C1QTNF8P60827 252 aa15.14■□□□□ 0.01
CDC27-202ENST00000525495 GCKRQ14397 625 aa15.14■□□□□ 0.01
CDC27-202ENST00000525495 KDM2BQ8NHM5 1336 aa15.13■□□□□ 0.01
CDC27-202ENST00000525495 H7C1W4 665 aa15.13■□□□□ 0.01
CDC27-202ENST00000525495 PDE8AO60658 829 aa15.13■□□□□ 0.01
CDC27-202ENST00000525495 IARSP41252 1262 aaKnown RBP15.13■□□□□ 0.01
CDC27-202ENST00000525495 UBE3BQ7Z3V4 1068 aa15.13■□□□□ 0.01
CDC27-202ENST00000525495 MRPL50Q8N5N7 158 aaKnown RBP15.13■□□□□ 0.01
CDC27-202ENST00000525495 LINS1Q8NG48 757 aa15.13■□□□□ 0.01
CDC27-202ENST00000525495 SSH1Q8WYL5 1049 aa15.13■□□□□ 0.01
CDC27-202ENST00000525495 CCDC85AQ96PX6 553 aaPredicted RBP15.13■□□□□ 0.01
CDC27-202ENST00000525495 SEC31BQ9NQW1 1179 aa15.13■□□□□ 0.01
CDC27-202ENST00000525495 CASP7P55210 303 aa15.12■□□□□ 0.01
CDC27-202ENST00000525495 BEND3Q5T5X7 828 aa15.12■□□□□ 0.01
CDC27-202ENST00000525495 SP8Q8IXZ3 490 aa15.12■□□□□ 0.01
CDC27-202ENST00000525495 BCL2L13Q9BXK5 485 aa15.12■□□□□ 0.01
CDC27-202ENST00000525495 DUOX1Q9NRD9 1551 aa15.11■□□□□ 0.01
CDC27-202ENST00000525495 WDR90Q96KV7 1748 aa15.11■□□□□ 0.01
CDC27-202ENST00000525495 GRIPAP1Q4V328 841 aa15.11■□□□□ 0.01
CDC27-202ENST00000525495 RRAGCQ9HB90 399 aa15.11■□□□□ 0.01
CDC27-202ENST00000525495 LTBP1Q14766 1721 aa15.1■□□□□ 0.01
CDC27-202ENST00000525495 HSP90B1P14625 803 aaKnown RBP15.1■□□□□ 0.01
CDC27-202ENST00000525495 CTSWP56202 376 aa15.1■□□□□ 0.01
CDC27-202ENST00000525495 POLA2Q14181 598 aa15.1■□□□□ 0.01
CDC27-202ENST00000525495 TTLL11Q8NHH1 800 aa15.1■□□□□ 0.01
CDC27-202ENST00000525495 SPEF2Q9C093 1822 aa15.1■□□□□ 0.01
CDC27-202ENST00000525495 ZNF541Q9H0D2 1346 aa15.1■□□□□ 0.01
CDC27-202ENST00000525495 DDNO94850 711 aaPredicted RBP15.09■□□□□ 0.01
CDC27-202ENST00000525495 RPS8P62241 208 aaKnown RBP15.09■□□□□ 0.01
CDC27-202ENST00000525495 HNRNPUQ00839 825 aaKnown RBP eCLIP15.09■□□□□ 0.01
CDC27-202ENST00000525495 CCDC152Q4G0S7 254 aa15.09■□□□□ 0.01
CDC27-202ENST00000525495 RTFDC1Q9BY42 306 aaPredicted RBP15.09■□□□□ 0.01
CDC27-202ENST00000525495 POTECB2RU33 542 aa15.08■□□□□ 0.01
CDC27-202ENST00000525495 FZD9O00144 591 aa15.08■□□□□ 0.01
CDC27-202ENST00000525495 DPY19L2Q6NUT2 758 aa15.08■□□□□ 0.01
CDC27-202ENST00000525495 SLC4A10Q6U841 1118 aa15.08■□□□□ 0.01
CDC27-202ENST00000525495 DPP8Q6V1X1 898 aaPredicted RBP15.08■□□□□ 0.01
CDC27-202ENST00000525495 TMC4Q7Z404 712 aa15.08■□□□□ 0.01
CDC27-202ENST00000525495 MPNDQ8N594 471 aa15.08■□□□□ 0.01
CDC27-202ENST00000525495 TMX4Q9H1E5 349 aaPredicted RBP15.08■□□□□ 0.01
CDC27-202ENST00000525495 GREM2Q9H772 168 aa15.08■□□□□ 0.01
CDC27-202ENST00000525495 AOC3Q16853 763 aa15.08■□□□□ 0
CDC27-202ENST00000525495 ALDH1L2Q3SY69 923 aa15.08■□□□□ 0
CDC27-202ENST00000525495 PLA2G12BQ9BX93 195 aa15.08■□□□□ 0
CDC27-202ENST00000525495 PPIP5K2O43314 1243 aa15.07■□□□□ 0
CDC27-202ENST00000525495 TOMM70O94826 608 aa15.07■□□□□ 0
CDC27-202ENST00000525495 GPSM2P81274 684 aa15.07■□□□□ 0
CDC27-202ENST00000525495 LARGE2Q8N3Y3 721 aa15.07■□□□□ 0
CDC27-202ENST00000525495 SMC4Q9NTJ3 1288 aa15.07■□□□□ 0
CDC27-202ENST00000525495 NSFL1CQ9UNZ2 370 aaKnown RBP15.07■□□□□ 0
CDC27-202ENST00000525495 PTPRCP08575 1304 aa15.06■□□□□ 0
CDC27-202ENST00000525495 RTL9Q8NET4 1388 aa15.06■□□□□ 0
CDC27-202ENST00000525495 CT47B1P0C2W7 299 aaPredicted RBP15.06■□□□□ 0
CDC27-202ENST00000525495 VEGFAP15692 232 aaPredicted RBP15.06■□□□□ 0
CDC27-202ENST00000525495 JDP2Q8WYK2 163 aa15.06■□□□□ 0
CDC27-202ENST00000525495 GRM8O00222 908 aa15.05■□□□□ -0
CDC27-202ENST00000525495 ALDH1L1O75891 902 aa15.05■□□□□ -0
CDC27-202ENST00000525495 FOXO4P98177 505 aa15.05■□□□□ -0
CDC27-202ENST00000525495 SUPT20HQ8NEM7 779 aa15.05■□□□□ -0
CDC27-202ENST00000525495 SRCIN1Q9C0H9 1055 aa15.05■□□□□ -0
CDC27-202ENST00000525495 POLLQ9UGP5 575 aa15.05■□□□□ -0
CDC27-202ENST00000525495 SCN4AP35499 1836 aa15.04■□□□□ -0
CDC27-202ENST00000525495 CSF1RP07333 972 aa15.04■□□□□ -0
CDC27-202ENST00000525495 KIAA2012Q0VF49 1180 aa15.04■□□□□ -0
CDC27-202ENST00000525495 FAM161AQ3B820 660 aa15.04■□□□□ -0
CDC27-202ENST00000525495 EPHA10Q5JZY3 1008 aa15.04■□□□□ -0
CDC27-202ENST00000525495 ANKRD18AQ8IVF6 992 aa15.04■□□□□ -0
CDC27-202ENST00000525495 NIM1KQ8IY84 436 aa15.04■□□□□ -0
CDC27-202ENST00000525495 L3MBTL3Q96JM7 780 aaPredicted RBP15.04■□□□□ -0
CDC27-202ENST00000525495 VPS33BQ9H267 617 aa15.04■□□□□ -0
CDC27-202ENST00000525495 RARSP54136 660 aaKnown RBP15.03■□□□□ -0
CDC27-202ENST00000525495 C16orf71Q8IYS4 520 aaPredicted RBP15.03■□□□□ -0
CDC27-202ENST00000525495 GPR101Q96P66 508 aaPredicted RBP15.03■□□□□ -0
CDC27-202ENST00000525495 CDC5LQ99459 802 aaKnown RBP15.03■□□□□ -0
CDC27-202ENST00000525495 C6orf229H3BNL8 230 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms