RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 RARSP54136 660 aaKnown RBP16.46■□□□□ 0.23
CTSB-209ENST00000525315 CASP7P55210 303 aa16.46■□□□□ 0.23
CTSB-209ENST00000525315 GRAPQ13588 217 aa16.46■□□□□ 0.23
CTSB-209ENST00000525315 GRAPLQ8TC17 118 aaPredicted RBP16.46■□□□□ 0.23
CTSB-209ENST00000525315 RNF181Q9P0P0 153 aa16.46■□□□□ 0.23
CTSB-209ENST00000525315 ATP6V0A2Q9Y487 856 aa16.46■□□□□ 0.23
CTSB-209ENST00000525315 PPEF1O14829 653 aaPredicted RBP16.45■□□□□ 0.22
CTSB-209ENST00000525315 ALDH1L1O75891 902 aa16.45■□□□□ 0.22
CTSB-209ENST00000525315 FKBP4Q02790 459 aaKnown RBP eCLIP16.45■□□□□ 0.22
CTSB-209ENST00000525315 SP8Q8IXZ3 490 aa16.45■□□□□ 0.22
CTSB-209ENST00000525315 PLA2G12BQ9BX93 195 aa16.45■□□□□ 0.22
CTSB-209ENST00000525315 BCL2L13Q9BXK5 485 aa16.45■□□□□ 0.22
CTSB-209ENST00000525315 TAOK3Q9H2K8 898 aa16.45■□□□□ 0.22
CTSB-209ENST00000525315 SMC4Q9NTJ3 1288 aa16.45■□□□□ 0.22
CTSB-209ENST00000525315 UBE3BQ7Z3V4 1068 aa16.44■□□□□ 0.22
CTSB-209ENST00000525315 TMC4Q7Z404 712 aa16.44■□□□□ 0.22
CTSB-209ENST00000525315 PSMD1Q99460 953 aa16.44■□□□□ 0.22
CTSB-209ENST00000525315 CCDC152Q4G0S7 254 aa16.43■□□□□ 0.22
CTSB-209ENST00000525315 SLC4A10Q6U841 1118 aa16.43■□□□□ 0.22
CTSB-209ENST00000525315 TTLL11Q8NHH1 800 aa16.43■□□□□ 0.22
CTSB-209ENST00000525315 CELF1Q92879 486 aaKnown RBP16.43■□□□□ 0.22
CTSB-209ENST00000525315 SRCIN1Q9C0H9 1055 aa16.43■□□□□ 0.22
CTSB-209ENST00000525315 CTSWP56202 376 aa16.42■□□□□ 0.22
CTSB-209ENST00000525315 RPS8P62241 208 aaKnown RBP16.42■□□□□ 0.22
CTSB-209ENST00000525315 SLC51AQ86UW1 340 aa16.42■□□□□ 0.22
CTSB-209ENST00000525315 SEC31BQ9NQW1 1179 aa16.42■□□□□ 0.22
CTSB-209ENST00000525315 NOB1Q9ULX3 412 aaKnown RBP16.42■□□□□ 0.22
CTSB-209ENST00000525315 COL4A1P02462 1669 aa16.42■□□□□ 0.22
CTSB-209ENST00000525315 ZC3H4Q9UPT8 1303 aaKnown RBP16.42■□□□□ 0.22
CTSB-209ENST00000525315 LRRC37AA6NMS7 1700 aa16.42■□□□□ 0.22
CTSB-209ENST00000525315 GRM8O00222 908 aa16.41■□□□□ 0.22
CTSB-209ENST00000525315 CSF1RP07333 972 aa16.41■□□□□ 0.22
CTSB-209ENST00000525315 ARHGAP45Q92619 1136 aa16.41■□□□□ 0.22
CTSB-209ENST00000525315 TMX4Q9H1E5 349 aaPredicted RBP16.41■□□□□ 0.22
CTSB-209ENST00000525315 TIAM2Q8IVF5 1701 aa16.41■□□□□ 0.22
CTSB-209ENST00000525315 RTFDC1Q9BY42 306 aaPredicted RBP16.4■□□□□ 0.22
CTSB-209ENST00000525315 ZNF277Q9NRM2 450 aaPredicted RBP16.4■□□□□ 0.22
CTSB-209ENST00000525315 UTYO14607 1347 aa16.4■□□□□ 0.22
CTSB-209ENST00000525315 RTL9Q8NET4 1388 aa16.39■□□□□ 0.21
CTSB-209ENST00000525315 FOXO4P98177 505 aa16.39■□□□□ 0.21
CTSB-209ENST00000525315 MPNDQ8N594 471 aa16.39■□□□□ 0.21
CTSB-209ENST00000525315 VPS33BQ9H267 617 aa16.39■□□□□ 0.21
CTSB-209ENST00000525315 C9orf78Q9NZ63 289 aaPredicted RBP16.39■□□□□ 0.21
CTSB-209ENST00000525315 BCAR3O75815 825 aa16.38■□□□□ 0.21
CTSB-209ENST00000525315 IARSP41252 1262 aaKnown RBP16.38■□□□□ 0.21
CTSB-209ENST00000525315 CCDC85AQ96PX6 553 aaPredicted RBP16.38■□□□□ 0.21
CTSB-209ENST00000525315 API5Q9BZZ5 524 aaKnown RBP16.38■□□□□ 0.21
CTSB-209ENST00000525315 GREM2Q9H772 168 aa16.38■□□□□ 0.21
CTSB-209ENST00000525315 SPEF2Q9C093 1822 aa16.38■□□□□ 0.21
CTSB-209ENST00000525315 GLTPD2A6NH11 291 aa16.37■□□□□ 0.21
CTSB-209ENST00000525315 USP44Q9H0E7 712 aa16.37■□□□□ 0.21
CTSB-209ENST00000525315 GPBP1L1Q9HC44 474 aaPredicted RBP16.37■□□□□ 0.21
CTSB-209ENST00000525315 KIF16BQ96L93 1317 aa16.37■□□□□ 0.21
CTSB-209ENST00000525315 NBPF7P0C2Y1 421 aaPredicted RBP16.36■□□□□ 0.21
CTSB-209ENST00000525315 EPHA10Q5JZY3 1008 aa16.36■□□□□ 0.21
CTSB-209ENST00000525315 DPP8Q6V1X1 898 aaPredicted RBP16.36■□□□□ 0.21
CTSB-209ENST00000525315 ANKRD18AQ8IVF6 992 aa16.36■□□□□ 0.21
CTSB-209ENST00000525315 SUPT20HQ8NEM7 779 aa16.36■□□□□ 0.21
CTSB-209ENST00000525315 ZNF526Q8TF50 670 aaPredicted RBP16.36■□□□□ 0.21
CTSB-209ENST00000525315 CDC5LQ99459 802 aaKnown RBP16.36■□□□□ 0.21
CTSB-209ENST00000525315 LTBP1Q14766 1721 aa16.36■□□□□ 0.21
CTSB-209ENST00000525315 FZD9O00144 591 aa16.35■□□□□ 0.21
CTSB-209ENST00000525315 IPO8O15397 1037 aaKnown RBP16.35■□□□□ 0.21
CTSB-209ENST00000525315 CCT4P50991 539 aaKnown RBP16.35■□□□□ 0.21
CTSB-209ENST00000525315 DPY19L2Q6NUT2 758 aa16.35■□□□□ 0.21
CTSB-209ENST00000525315 KAZALD1Q96I82 304 aa16.35■□□□□ 0.21
CTSB-209ENST00000525315 BSDC1Q9NW68 430 aaPredicted RBP16.35■□□□□ 0.21
CTSB-209ENST00000525315 PODXL2Q9NZ53 605 aa16.35■□□□□ 0.21
CTSB-209ENST00000525315 KDM2BQ8NHM5 1336 aa16.35■□□□□ 0.21
CTSB-209ENST00000525315 ITGA6P23229 1130 aa16.34■□□□□ 0.21
CTSB-209ENST00000525315 GPSM2P81274 684 aa16.34■□□□□ 0.21
CTSB-209ENST00000525315 LMBR1LQ6UX01 489 aa16.34■□□□□ 0.21
CTSB-209ENST00000525315 SUCLG2Q96I99 432 aa16.34■□□□□ 0.21
CTSB-209ENST00000525315 NSFL1CQ9UNZ2 370 aaKnown RBP16.34■□□□□ 0.21
CTSB-209ENST00000525315 DUOX1Q9NRD9 1551 aa16.34■□□□□ 0.21
CTSB-209ENST00000525315 COL4A5P29400 1685 aa16.34■□□□□ 0.21
CTSB-209ENST00000525315 FAM161AQ3B820 660 aa16.33■□□□□ 0.2
CTSB-209ENST00000525315 JDP2Q8WYK2 163 aa16.33■□□□□ 0.2
CTSB-209ENST00000525315 POLLQ9UGP5 575 aa16.33■□□□□ 0.2
CTSB-209ENST00000525315 WDR90Q96KV7 1748 aa16.33■□□□□ 0.2
CTSB-209ENST00000525315 ANKRD18BA2A2Z9 1011 aa16.32■□□□□ 0.2
CTSB-209ENST00000525315 KIF3CO14782 793 aa16.32■□□□□ 0.2
CTSB-209ENST00000525315 IGHMBP2P38935 993 aaKnown RBP16.32■□□□□ 0.2
CTSB-209ENST00000525315 KIAA2012Q0VF49 1180 aa16.32■□□□□ 0.2
CTSB-209ENST00000525315 INTS3Q68E01 1043 aaKnown RBP16.32■□□□□ 0.2
CTSB-209ENST00000525315 ATF7IPQ6VMQ6 1270 aa16.32■□□□□ 0.2
CTSB-209ENST00000525315 LARGE2Q8N3Y3 721 aa16.32■□□□□ 0.2
CTSB-209ENST00000525315 MINPP1Q9UNW1 487 aa16.32■□□□□ 0.2
CTSB-209ENST00000525315 PPIP5K2O43314 1243 aa16.31■□□□□ 0.2
CTSB-209ENST00000525315 TRIM27P14373 513 aa16.31■□□□□ 0.2
CTSB-209ENST00000525315 IFIT5Q13325 482 aaKnown RBP16.31■□□□□ 0.2
CTSB-209ENST00000525315 AOC3Q16853 763 aa16.31■□□□□ 0.2
CTSB-209ENST00000525315 RABL6Q3YEC7 729 aaPredicted RBP16.31■□□□□ 0.2
CTSB-209ENST00000525315 TBC1D16Q8TBP0 767 aa16.31■□□□□ 0.2
CTSB-209ENST00000525315 RRAGCQ9HB90 399 aa16.31■□□□□ 0.2
CTSB-209ENST00000525315 NMRK2Q9NPI5 230 aa16.31■□□□□ 0.2
CTSB-209ENST00000525315 POTECB2RU33 542 aa16.3■□□□□ 0.2
CTSB-209ENST00000525315 DDNO94850 711 aaPredicted RBP16.3■□□□□ 0.2
CTSB-209ENST00000525315 WASHC4Q2M389 1173 aa16.3■□□□□ 0.2
CTSB-209ENST00000525315 ZKSCAN2Q63HK3 967 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms