RNA–Protein interactions for RNA: ENST00000524529.6

CNKSR1-209, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-209ENST00000524529 GRAPQ13588 217 aa12.54□□□□□ -0.4
CNKSR1-209ENST00000524529 SP8Q8IXZ3 490 aa12.54□□□□□ -0.4
CNKSR1-209ENST00000524529 NIM1KQ8IY84 436 aa12.54□□□□□ -0.4
CNKSR1-209ENST00000524529 CNTROBQ8N137 903 aa12.54□□□□□ -0.4
CNKSR1-209ENST00000524529 GRAPLQ8TC17 118 aaPredicted RBP12.54□□□□□ -0.4
CNKSR1-209ENST00000524529 FAM89AQ96GI7 184 aa12.54□□□□□ -0.4
CNKSR1-209ENST00000524529 PHAXQ9H814 394 aaKnown RBP12.54□□□□□ -0.4
CNKSR1-209ENST00000524529 POLR2AP24928 1970 aaKnown RBP12.54□□□□□ -0.4
CNKSR1-209ENST00000524529 SCN9AQ15858 1988 aa12.53□□□□□ -0.4
CNKSR1-209ENST00000524529 TMEM88BA6NKF7 163 aa12.53□□□□□ -0.4
CNKSR1-209ENST00000524529 ELL2O00472 640 aaPredicted RBP12.53□□□□□ -0.4
CNKSR1-209ENST00000524529 BBOX1O75936 387 aa12.53□□□□□ -0.4
CNKSR1-209ENST00000524529 CXCL9Q07325 125 aa12.53□□□□□ -0.4
CNKSR1-209ENST00000524529 PNMA8AQ86V59 439 aaPredicted RBP12.53□□□□□ -0.4
CNKSR1-209ENST00000524529 YDJCA8MPS7 323 aa12.52□□□□□ -0.41
CNKSR1-209ENST00000524529 VEGFBP49765 207 aa12.52□□□□□ -0.41
CNKSR1-209ENST00000524529 RTL5Q5HYW3 569 aaPredicted RBP12.52□□□□□ -0.41
CNKSR1-209ENST00000524529 DDX46Q7L014 1031 aaKnown RBP12.52□□□□□ -0.41
CNKSR1-209ENST00000524529 MPNDQ8N594 471 aa12.52□□□□□ -0.41
CNKSR1-209ENST00000524529 C8orf58Q8NAV2 365 aa12.52□□□□□ -0.41
CNKSR1-209ENST00000524529 CELF1Q92879 486 aaKnown RBP12.52□□□□□ -0.41
CNKSR1-209ENST00000524529 IFT57Q9NWB7 429 aa12.52□□□□□ -0.41
CNKSR1-209ENST00000524529 HYPKQ9NX55 129 aa12.52□□□□□ -0.41
CNKSR1-209ENST00000524529 CCER2I3L3R5 266 aa12.51□□□□□ -0.41
CNKSR1-209ENST00000524529 KIAA2012Q0VF49 1180 aa12.51□□□□□ -0.41
CNKSR1-209ENST00000524529 TRIM28Q13263 835 aaKnown RBP12.51□□□□□ -0.41
CNKSR1-209ENST00000524529 SF3B3Q15393 1217 aaKnown RBP12.51□□□□□ -0.41
CNKSR1-209ENST00000524529 DPP8Q6V1X1 898 aaPredicted RBP12.51□□□□□ -0.41
CNKSR1-209ENST00000524529 TSPYL6Q8N831 410 aa12.51□□□□□ -0.41
CNKSR1-209ENST00000524529 VPS33BQ9H267 617 aa12.51□□□□□ -0.41
CNKSR1-209ENST00000524529 MRS2Q9HD23 443 aa12.51□□□□□ -0.41
CNKSR1-209ENST00000524529 ZNRF3Q9ULT6 936 aa12.51□□□□□ -0.41
CNKSR1-209ENST00000524529 SHTN1A0MZ66 631 aa12.5□□□□□ -0.41
CNKSR1-209ENST00000524529 TRAF5O00463 557 aa12.5□□□□□ -0.41
CNKSR1-209ENST00000524529 FOXN1O15353 648 aa12.5□□□□□ -0.41
CNKSR1-209ENST00000524529 LMOD1P29536 600 aaPredicted RBP12.5□□□□□ -0.41
CNKSR1-209ENST00000524529 SUPT20HQ8NEM7 779 aa12.5□□□□□ -0.41
CNKSR1-209ENST00000524529 GPRC5DQ9NZD1 345 aa12.5□□□□□ -0.41
CNKSR1-209ENST00000524529 MYH3P11055 1940 aa12.49□□□□□ -0.41
CNKSR1-209ENST00000524529 RASSF10A6NK89 507 aa12.49□□□□□ -0.41
CNKSR1-209ENST00000524529 IRS4O14654 1257 aaPredicted RBP12.49□□□□□ -0.41
CNKSR1-209ENST00000524529 RAD17O75943 681 aa12.49□□□□□ -0.41
CNKSR1-209ENST00000524529 GMPSP49915 693 aaPredicted RBP12.49□□□□□ -0.41
CNKSR1-209ENST00000524529 HIRAP54198 1017 aaPredicted RBP12.49□□□□□ -0.41
CNKSR1-209ENST00000524529 GNAI1P63096 354 aa12.49□□□□□ -0.41
CNKSR1-209ENST00000524529 USP50Q70EL3 339 aaPredicted RBP12.49□□□□□ -0.41
CNKSR1-209ENST00000524529 JARID2Q92833 1246 aaPredicted RBP12.49□□□□□ -0.41
CNKSR1-209ENST00000524529 GPSM2P81274 684 aa12.48□□□□□ -0.41
CNKSR1-209ENST00000524529 CST9Q5W186 159 aa12.48□□□□□ -0.41
CNKSR1-209ENST00000524529 CIAPIN1Q6FI81 312 aa12.48□□□□□ -0.41
CNKSR1-209ENST00000524529 RIC3Q7Z5B4 369 aa12.48□□□□□ -0.41
CNKSR1-209ENST00000524529 GPR101Q96P66 508 aaPredicted RBP12.48□□□□□ -0.41
CNKSR1-209ENST00000524529 MYD88Q99836 296 aa12.48□□□□□ -0.41
CNKSR1-209ENST00000524529 TMX4Q9H1E5 349 aaPredicted RBP12.48□□□□□ -0.41
CNKSR1-209ENST00000524529 SEC31BQ9NQW1 1179 aa12.48□□□□□ -0.41
CNKSR1-209ENST00000524529 ADARB2Q9NS39 739 aaKnown RBP12.48□□□□□ -0.41
CNKSR1-209ENST00000524529 POLLQ9UGP5 575 aa12.48□□□□□ -0.41
CNKSR1-209ENST00000524529 SPEF2Q9C093 1822 aa12.48□□□□□ -0.41
CNKSR1-209ENST00000524529 THSD7BQ9C0I4 1608 aa12.48□□□□□ -0.41
CNKSR1-209ENST00000524529 PSME4Q14997 1843 aa12.47□□□□□ -0.41
CNKSR1-209ENST00000524529 DEFB115Q30KQ5 88 aa12.47□□□□□ -0.41
CNKSR1-209ENST00000524529 TMC4Q7Z404 712 aa12.47□□□□□ -0.41
CNKSR1-209ENST00000524529 ZBTB38Q8NAP3 1195 aaPredicted RBP12.47□□□□□ -0.41
CNKSR1-209ENST00000524529 TRPM4Q8TD43 1214 aa12.47□□□□□ -0.41
CNKSR1-209ENST00000524529 TSR2Q969E8 191 aaKnown RBP12.47□□□□□ -0.41
CNKSR1-209ENST00000524529 KCNQ5Q9NR82 932 aa12.47□□□□□ -0.41
CNKSR1-209ENST00000524529 NSFL1CQ9UNZ2 370 aaKnown RBP12.47□□□□□ -0.41
CNKSR1-209ENST00000524529 GOLGA2Q08379 1002 aa12.46□□□□□ -0.41
CNKSR1-209ENST00000524529 METTL22Q9BUU2 404 aaPredicted RBP12.46□□□□□ -0.41
CNKSR1-209ENST00000524529 DBNDD1Q9H9R9 158 aa12.46□□□□□ -0.41
CNKSR1-209ENST00000524529 WBP1LQ9NX94 342 aa12.46□□□□□ -0.41
CNKSR1-209ENST00000524529 PGAP2Q9UHJ9 254 aa12.46□□□□□ -0.41
CNKSR1-209ENST00000524529 ZBTB12Q9Y330 459 aaPredicted RBP12.46□□□□□ -0.41
CNKSR1-209ENST00000524529 CACNA1FO60840 1977 aa12.46□□□□□ -0.41
CNKSR1-209ENST00000524529 RTL9Q8NET4 1388 aa12.45□□□□□ -0.42
CNKSR1-209ENST00000524529 WDR33Q9C0J8 1336 aaKnown RBP12.45□□□□□ -0.42
CNKSR1-209ENST00000524529 PSMD14O00487 310 aa12.45□□□□□ -0.42
CNKSR1-209ENST00000524529 RIMBP2O15034 1052 aa12.45□□□□□ -0.42
CNKSR1-209ENST00000524529 PCCAP05165 728 aaPredicted RBP12.45□□□□□ -0.42
CNKSR1-209ENST00000524529 IGKV5-2P06315 115 aa12.45□□□□□ -0.42
CNKSR1-209ENST00000524529 RPS8P62241 208 aaKnown RBP12.45□□□□□ -0.42
CNKSR1-209ENST00000524529 CALD1Q05682 793 aaKnown RBP12.45□□□□□ -0.42
CNKSR1-209ENST00000524529 WASHC4Q2M389 1173 aa12.45□□□□□ -0.42
CNKSR1-209ENST00000524529 MIER1Q8N108 512 aa12.45□□□□□ -0.42
CNKSR1-209ENST00000524529 CCDC191Q8NCU4 936 aa12.45□□□□□ -0.42
CNKSR1-209ENST00000524529 GLIS2Q9BZE0 524 aaPredicted RBP12.45□□□□□ -0.42
CNKSR1-209ENST00000524529 ABT1Q9ULW3 272 aaKnown RBP12.45□□□□□ -0.42
CNKSR1-209ENST00000524529 ZNF646O15015 1829 aaPredicted RBP12.44□□□□□ -0.42
CNKSR1-209ENST00000524529 CDHR2Q9BYE9 1310 aa12.44□□□□□ -0.42
CNKSR1-209ENST00000524529 EGFRP00533 1210 aa12.44□□□□□ -0.42
CNKSR1-209ENST00000524529 CCDC30Q5VVM6 783 aa12.44□□□□□ -0.42
CNKSR1-209ENST00000524529 CYP4F22Q6NT55 531 aa12.44□□□□□ -0.42
CNKSR1-209ENST00000524529 DLK2Q6UY11 383 aa12.44□□□□□ -0.42
CNKSR1-209ENST00000524529 G2E3Q7L622 706 aa12.44□□□□□ -0.42
CNKSR1-209ENST00000524529 WWC1Q8IX03 1113 aa12.44□□□□□ -0.42
CNKSR1-209ENST00000524529 TBC1D16Q8TBP0 767 aa12.44□□□□□ -0.42
CNKSR1-209ENST00000524529 CCDC85AQ96PX6 553 aaPredicted RBP12.44□□□□□ -0.42
CNKSR1-209ENST00000524529 BCL2L13Q9BXK5 485 aa12.44□□□□□ -0.42
CNKSR1-209ENST00000524529 PRDM10Q9NQV6 1147 aa12.44□□□□□ -0.42
CNKSR1-209ENST00000524529 CNOT7Q9UIV1 285 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms