RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 AK9Q5TCS8 1911 aa12.1□□□□□ -0.47
VPS13B-212ENST00000524330 BTAF1O14981 1849 aa12.1□□□□□ -0.47
VPS13B-212ENST00000524330 CAMTA2O94983 1202 aa12.1□□□□□ -0.47
VPS13B-212ENST00000524330 ATP5JP18859 108 aa12.1□□□□□ -0.47
VPS13B-212ENST00000524330 CCDC152Q4G0S7 254 aa12.1□□□□□ -0.47
VPS13B-212ENST00000524330 CCDC158Q5M9N0 1113 aa12.1□□□□□ -0.47
VPS13B-212ENST00000524330 GORABQ5T7V8 394 aa12.1□□□□□ -0.47
VPS13B-212ENST00000524330 EAF2Q96CJ1 260 aaPredicted RBP12.1□□□□□ -0.47
VPS13B-212ENST00000524330 USP26Q9BXU7 913 aa12.1□□□□□ -0.47
VPS13B-212ENST00000524330 CCDC8Q9H0W5 538 aaPredicted RBP12.1□□□□□ -0.47
VPS13B-212ENST00000524330 COL5A3P25940 1745 aaPredicted RBP12.1□□□□□ -0.47
VPS13B-212ENST00000524330 RAD50Q92878 1312 aa12.1□□□□□ -0.47
VPS13B-212ENST00000524330 RFX7Q2KHR2 1363 aa12.09□□□□□ -0.47
VPS13B-212ENST00000524330 MSH5O43196 834 aa12.09□□□□□ -0.47
VPS13B-212ENST00000524330 ST18O60284 1047 aa12.09□□□□□ -0.47
VPS13B-212ENST00000524330 ADRA2BP18089 450 aa12.09□□□□□ -0.47
VPS13B-212ENST00000524330 GTF2E1P29083 439 aaPredicted RBP12.09□□□□□ -0.47
VPS13B-212ENST00000524330 ANAPC15P60006 121 aa12.09□□□□□ -0.47
VPS13B-212ENST00000524330 SLC27A3Q5K4L6 730 aa12.09□□□□□ -0.47
VPS13B-212ENST00000524330 TSHZ3Q63HK5 1081 aa12.09□□□□□ -0.47
VPS13B-212ENST00000524330 LINC00116Q8NCU8 138 aa12.09□□□□□ -0.47
VPS13B-212ENST00000524330 KLHDC4Q8TBB5 520 aa12.09□□□□□ -0.47
VPS13B-212ENST00000524330 SNX21Q969T3 373 aa12.09□□□□□ -0.47
VPS13B-212ENST00000524330 NEUROD6Q96NK8 337 aa12.09□□□□□ -0.47
VPS13B-212ENST00000524330 CNNM1Q9NRU3 951 aa12.09□□□□□ -0.47
VPS13B-212ENST00000524330 NARFQ9UHQ1 456 aa12.09□□□□□ -0.47
VPS13B-212ENST00000524330 IGHMBP2P38935 993 aaKnown RBP12.08□□□□□ -0.48
VPS13B-212ENST00000524330 LDHAL6AQ6ZMR3 332 aa12.08□□□□□ -0.48
VPS13B-212ENST00000524330 TTLL11Q8NHH1 800 aa12.08□□□□□ -0.48
VPS13B-212ENST00000524330 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.08□□□□□ -0.48
VPS13B-212ENST00000524330 CDC5LQ99459 802 aaKnown RBP12.08□□□□□ -0.48
VPS13B-212ENST00000524330 FSD1Q9BTV5 496 aa12.08□□□□□ -0.48
VPS13B-212ENST00000524330 ANO2Q9NQ90 1003 aa12.08□□□□□ -0.48
VPS13B-212ENST00000524330 MROH5Q6ZUA9 1318 aa12.08□□□□□ -0.48
VPS13B-212ENST00000524330 MYH3P11055 1940 aa12.07□□□□□ -0.48
VPS13B-212ENST00000524330 GNPATO15228 680 aa12.07□□□□□ -0.48
VPS13B-212ENST00000524330 ITGA6P23229 1130 aa12.07□□□□□ -0.48
VPS13B-212ENST00000524330 MCM2P49736 904 aa12.07□□□□□ -0.48
VPS13B-212ENST00000524330 METTL24Q5JXM2 366 aa12.07□□□□□ -0.48
VPS13B-212ENST00000524330 TRAPPC3LQ5T215 181 aa12.07□□□□□ -0.48
VPS13B-212ENST00000524330 SUSD4Q5VX71 490 aa12.07□□□□□ -0.48
VPS13B-212ENST00000524330 SETDB2Q96T68 719 aa12.07□□□□□ -0.48
VPS13B-212ENST00000524330 MPHOSPH8Q99549 860 aa12.07□□□□□ -0.48
VPS13B-212ENST00000524330 TUBGCP6Q96RT7 1819 aa12.07□□□□□ -0.48
VPS13B-212ENST00000524330 RTL9Q8NET4 1388 aa12.06□□□□□ -0.48
VPS13B-212ENST00000524330 NPHP1O15259 732 aa12.06□□□□□ -0.48
VPS13B-212ENST00000524330 HSP90AA1P07900 732 aaKnown RBP12.06□□□□□ -0.48
VPS13B-212ENST00000524330 RFC4P35249 363 aa12.06□□□□□ -0.48
VPS13B-212ENST00000524330 TTC39AQ5SRH9 613 aa12.06□□□□□ -0.48
VPS13B-212ENST00000524330 ATG9AQ7Z3C6 839 aa12.06□□□□□ -0.48
VPS13B-212ENST00000524330 BOLA2Q9H3K6 86 aa12.06□□□□□ -0.48
VPS13B-212ENST00000524330 UBN2Q6ZU65 1347 aa12.06□□□□□ -0.48
VPS13B-212ENST00000524330 LY75O60449 1722 aa12.06□□□□□ -0.48
VPS13B-212ENST00000524330 ABCC12Q96J65 1359 aa12.05□□□□□ -0.48
VPS13B-212ENST00000524330 BCORQ6W2J9 1755 aa12.05□□□□□ -0.48
VPS13B-212ENST00000524330 SBF2Q86WG5 1849 aa12.05□□□□□ -0.48
VPS13B-212ENST00000524330 A0A1B0GUL7 405 aa12.05□□□□□ -0.48
VPS13B-212ENST00000524330 SGSM2O43147 1006 aa12.05□□□□□ -0.48
VPS13B-212ENST00000524330 MAP4K4O95819 1239 aaPredicted RBP12.05□□□□□ -0.48
VPS13B-212ENST00000524330 TPTE2Q6XPS3 522 aa12.05□□□□□ -0.48
VPS13B-212ENST00000524330 HAUS7Q99871 368 aa12.05□□□□□ -0.48
VPS13B-212ENST00000524330 DBNLQ9UJU6 430 aaKnown RBP12.05□□□□□ -0.48
VPS13B-212ENST00000524330 ZNF609O15014 1411 aa12.04□□□□□ -0.48
VPS13B-212ENST00000524330 NTSR2O95665 410 aa12.04□□□□□ -0.48
VPS13B-212ENST00000524330 IFIT1P09914 478 aaKnown RBP12.04□□□□□ -0.48
VPS13B-212ENST00000524330 UQCRFS1P1P0C7P4 283 aa12.04□□□□□ -0.48
VPS13B-212ENST00000524330 ATP2B3Q16720 1220 aa12.04□□□□□ -0.48
VPS13B-212ENST00000524330 LRRC24Q50LG9 513 aa12.04□□□□□ -0.48
VPS13B-212ENST00000524330 RNF20Q5VTR2 975 aa12.04□□□□□ -0.48
VPS13B-212ENST00000524330 ZNF594Q96JF6 807 aaPredicted RBP12.04□□□□□ -0.48
VPS13B-212ENST00000524330 DBNDD2Q9BQY9 259 aa12.04□□□□□ -0.48
VPS13B-212ENST00000524330 TBC1D2Q9BYX2 928 aa12.04□□□□□ -0.48
VPS13B-212ENST00000524330 GREM2Q9H772 168 aa12.04□□□□□ -0.48
VPS13B-212ENST00000524330 MYH14Q7Z406 1995 aaKnown RBP12.04□□□□□ -0.48
VPS13B-212ENST00000524330 FAM177BA6PVY3 158 aa12.03□□□□□ -0.48
VPS13B-212ENST00000524330 ZFYP08048 801 aaPredicted RBP12.03□□□□□ -0.48
VPS13B-212ENST00000524330 SLC5A1P13866 664 aa12.03□□□□□ -0.48
VPS13B-212ENST00000524330 RXRBP28702 533 aa12.03□□□□□ -0.48
VPS13B-212ENST00000524330 KCNJ4P48050 445 aa12.03□□□□□ -0.48
VPS13B-212ENST00000524330 ZSCAN25Q6NSZ9 544 aa12.03□□□□□ -0.48
VPS13B-212ENST00000524330 CWC27Q6UX04 472 aaKnown RBP12.03□□□□□ -0.48
VPS13B-212ENST00000524330 NBPF5PQ86XG9 351 aaPredicted RBP12.03□□□□□ -0.48
VPS13B-212ENST00000524330 NLRP3Q96P20 1036 aa12.03□□□□□ -0.48
VPS13B-212ENST00000524330 CCDC85AQ96PX6 553 aaPredicted RBP12.03□□□□□ -0.48
VPS13B-212ENST00000524330 DNAJC2Q99543 621 aaKnown RBP12.03□□□□□ -0.48
VPS13B-212ENST00000524330 SCN7AQ01118 1682 aa12.03□□□□□ -0.48
VPS13B-212ENST00000524330 LAMB2P55268 1798 aa12.02□□□□□ -0.48
VPS13B-212ENST00000524330 SPEF2Q9C093 1822 aa12.02□□□□□ -0.48
VPS13B-212ENST00000524330 K7ELQ4 463 aaPredicted RBP12.02□□□□□ -0.49
VPS13B-212ENST00000524330 ZKSCAN1P17029 563 aaPredicted RBP12.02□□□□□ -0.49
VPS13B-212ENST00000524330 TTF1Q15361 905 aaPredicted RBP12.02□□□□□ -0.49
VPS13B-212ENST00000524330 PUM3Q15397 648 aaKnown RBP12.02□□□□□ -0.49
VPS13B-212ENST00000524330 SLC10A5Q5PT55 438 aa12.02□□□□□ -0.49
VPS13B-212ENST00000524330 FAM182BQ5T319 152 aa12.02□□□□□ -0.49
VPS13B-212ENST00000524330 USPL1Q5W0Q7 1092 aa12.02□□□□□ -0.49
VPS13B-212ENST00000524330 ANKRD18AQ8IVF6 992 aa12.02□□□□□ -0.49
VPS13B-212ENST00000524330 LPIN2Q92539 896 aa12.02□□□□□ -0.49
VPS13B-212ENST00000524330 ANP32EQ9BTT0 268 aa12.02□□□□□ -0.49
VPS13B-212ENST00000524330 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.02□□□□□ -0.499e-7■■■■■ 29.4
VPS13B-212ENST00000524330 PAG1Q9NWQ8 432 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms