RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 FAM89AQ96GI7 184 aa20.1■□□□□ 0.81
MRPS28-209ENST00000522987 LRRC37AA6NMS7 1700 aa20.1■□□□□ 0.81
MRPS28-209ENST00000522987 POLR2AP24928 1970 aaKnown RBP20.1■□□□□ 0.81
MRPS28-209ENST00000522987 DUOX1Q9NRD9 1551 aa20.09■□□□□ 0.81
MRPS28-209ENST00000522987 GRAPQ13588 217 aa20.09■□□□□ 0.81
MRPS28-209ENST00000522987 DUSP27Q5VZP5 1158 aa20.09■□□□□ 0.81
MRPS28-209ENST00000522987 SP8Q8IXZ3 490 aa20.09■□□□□ 0.81
MRPS28-209ENST00000522987 GRAPLQ8TC17 118 aaPredicted RBP20.09■□□□□ 0.81
MRPS28-209ENST00000522987 ELL2O00472 640 aaPredicted RBP20.08■□□□□ 0.81
MRPS28-209ENST00000522987 BBOX1O75936 387 aa20.08■□□□□ 0.81
MRPS28-209ENST00000522987 GMPSP49915 693 aaPredicted RBP20.08■□□□□ 0.81
MRPS28-209ENST00000522987 ANKRD13DQ6ZTN6 518 aa20.08■□□□□ 0.81
MRPS28-209ENST00000522987 SUPT20HQ8NEM7 779 aa20.08■□□□□ 0.81
MRPS28-209ENST00000522987 PLBD2Q8NHP8 589 aa20.08■□□□□ 0.81
MRPS28-209ENST00000522987 AIDAQ96BJ3 306 aa20.08■□□□□ 0.81
MRPS28-209ENST00000522987 MBIPQ9NS73 344 aa20.08■□□□□ 0.81
MRPS28-209ENST00000522987 ZNRF3Q9ULT6 936 aa20.08■□□□□ 0.81
MRPS28-209ENST00000522987 SHTN1A0MZ66 631 aa20.07■□□□□ 0.8
MRPS28-209ENST00000522987 GPRC5DQ9NZD1 345 aa20.07■□□□□ 0.8
MRPS28-209ENST00000522987 CIAPIN1Q6FI81 312 aa20.06■□□□□ 0.8
MRPS28-209ENST00000522987 USP50Q70EL3 339 aaPredicted RBP20.06■□□□□ 0.8
MRPS28-209ENST00000522987 CELF1Q92879 486 aaKnown RBP20.06■□□□□ 0.8
MRPS28-209ENST00000522987 BCL2L13Q9BXK5 485 aa20.06■□□□□ 0.8
MRPS28-209ENST00000522987 RTFDC1Q9BY42 306 aaPredicted RBP20.06■□□□□ 0.8
MRPS28-209ENST00000522987 DBF4Q9UBU7 674 aaPredicted RBP20.06■□□□□ 0.8
MRPS28-209ENST00000522987 SPEF2Q9C093 1822 aa20.06■□□□□ 0.8
MRPS28-209ENST00000522987 WDR33Q9C0J8 1336 aaKnown RBP20.05■□□□□ 0.8
MRPS28-209ENST00000522987 RASSF10A6NK89 507 aa20.05■□□□□ 0.8
MRPS28-209ENST00000522987 APAF1O14727 1248 aa20.05■□□□□ 0.8
MRPS28-209ENST00000522987 KIAA2012Q0VF49 1180 aa20.05■□□□□ 0.8
MRPS28-209ENST00000522987 CFAP44Q96MT7 982 aa20.05■□□□□ 0.8
MRPS28-209ENST00000522987 GPR101Q96P66 508 aaPredicted RBP20.05■□□□□ 0.8
MRPS28-209ENST00000522987 ISCA1Q9BUE6 129 aa20.05■□□□□ 0.8
MRPS28-209ENST00000522987 PRKRIP1Q9H875 184 aaPredicted RBP20.05■□□□□ 0.8
MRPS28-209ENST00000522987 ADARB2Q9NS39 739 aaKnown RBP20.05■□□□□ 0.8
MRPS28-209ENST00000522987 YDJCA8MPS7 323 aa20.04■□□□□ 0.8
MRPS28-209ENST00000522987 RIMBP2O15034 1052 aa20.04■□□□□ 0.8
MRPS28-209ENST00000522987 LBX1P52954 281 aa20.04■□□□□ 0.8
MRPS28-209ENST00000522987 CYP4F22Q6NT55 531 aa20.04■□□□□ 0.8
MRPS28-209ENST00000522987 JARID2Q92833 1246 aaPredicted RBP20.04■□□□□ 0.8
MRPS28-209ENST00000522987 PHAXQ9H814 394 aaKnown RBP20.04■□□□□ 0.8
MRPS28-209ENST00000522987 CST9Q5W186 159 aa20.03■□□□□ 0.8
MRPS28-209ENST00000522987 GLIS2Q9BZE0 524 aaPredicted RBP20.03■□□□□ 0.8
MRPS28-209ENST00000522987 ZNF408Q9H9D4 720 aa20.03■□□□□ 0.8
MRPS28-209ENST00000522987 DBNDD1Q9H9R9 158 aa20.03■□□□□ 0.8
MRPS28-209ENST00000522987 HYPKQ9NX55 129 aa20.03■□□□□ 0.8
MRPS28-209ENST00000522987 WBP1LQ9NX94 342 aa20.03■□□□□ 0.8
MRPS28-209ENST00000522987 NSFL1CQ9UNZ2 370 aaKnown RBP20.03■□□□□ 0.8
MRPS28-209ENST00000522987 ZBTB12Q9Y330 459 aaPredicted RBP20.03■□□□□ 0.8
MRPS28-209ENST00000522987 SCN9AQ15858 1988 aa20.03■□□□□ 0.8
MRPS28-209ENST00000522987 CTCFP49711 727 aaPredicted RBP20.02■□□□□ 0.8
MRPS28-209ENST00000522987 RIC3Q7Z5B4 369 aa20.02■□□□□ 0.8
MRPS28-209ENST00000522987 TRPM4Q8TD43 1214 aa20.02■□□□□ 0.8
MRPS28-209ENST00000522987 C6orf229H3BNL8 230 aa20.01■□□□□ 0.79
MRPS28-209ENST00000522987 IRS4O14654 1257 aaPredicted RBP20.01■□□□□ 0.79
MRPS28-209ENST00000522987 HOXB7P09629 217 aa20.01■□□□□ 0.79
MRPS28-209ENST00000522987 HIRAP54198 1017 aaPredicted RBP20.01■□□□□ 0.79
MRPS28-209ENST00000522987 GPSM2P81274 684 aa20.01■□□□□ 0.79
MRPS28-209ENST00000522987 DLK2Q6UY11 383 aa20.01■□□□□ 0.79
MRPS28-209ENST00000522987 CAPNS2Q96L46 248 aa20.01■□□□□ 0.79
MRPS28-209ENST00000522987 CCDC85AQ96PX6 553 aaPredicted RBP20.01■□□□□ 0.79
MRPS28-209ENST00000522987 MYD88Q99836 296 aa20.01■□□□□ 0.79
MRPS28-209ENST00000522987 VPS33BQ9H267 617 aa20.01■□□□□ 0.79
MRPS28-209ENST00000522987 GOLGA2Q08379 1002 aa20■□□□□ 0.79
MRPS28-209ENST00000522987 TNIP1Q15025 636 aa20■□□□□ 0.79
MRPS28-209ENST00000522987 DOK7Q18PE1 504 aa20■□□□□ 0.79
MRPS28-209ENST00000522987 CNOT7Q9UIV1 285 aaKnown RBP20■□□□□ 0.79
MRPS28-209ENST00000522987 THSD7BQ9C0I4 1608 aa19.99■□□□□ 0.79
MRPS28-209ENST00000522987 AOC2O75106 756 aa19.99■□□□□ 0.79
MRPS28-209ENST00000522987 CELF2O95319 508 aaKnown RBP19.99■□□□□ 0.79
MRPS28-209ENST00000522987 ZNF853P0CG23 659 aa19.99■□□□□ 0.79
MRPS28-209ENST00000522987 SF3B3Q15393 1217 aaKnown RBP19.99■□□□□ 0.79
MRPS28-209ENST00000522987 WASHC4Q2M389 1173 aa19.99■□□□□ 0.79
MRPS28-209ENST00000522987 C8orf58Q8NAV2 365 aa19.99■□□□□ 0.79
MRPS28-209ENST00000522987 SEC31BQ9NQW1 1179 aa19.99■□□□□ 0.79
MRPS28-209ENST00000522987 KCNQ5Q9NR82 932 aa19.99■□□□□ 0.79
MRPS28-209ENST00000522987 POLLQ9UGP5 575 aa19.99■□□□□ 0.79
MRPS28-209ENST00000522987 MYH3P11055 1940 aa19.98■□□□□ 0.79
MRPS28-209ENST00000522987 PSMD14O00487 310 aa19.98■□□□□ 0.79
MRPS28-209ENST00000522987 HSPA8P11142 646 aaKnown RBP19.98■□□□□ 0.79
MRPS28-209ENST00000522987 MICALL2Q8IY33 904 aa19.98■□□□□ 0.79
MRPS28-209ENST00000522987 PRDM10Q9NQV6 1147 aa19.98■□□□□ 0.79
MRPS28-209ENST00000522987 TSKSQ9UJT2 592 aa19.98■□□□□ 0.79
MRPS28-209ENST00000522987 GNAI1P63096 354 aa19.97■□□□□ 0.79
MRPS28-209ENST00000522987 RBM26Q5T8P6 1007 aaKnown RBP19.97■□□□□ 0.79
MRPS28-209ENST00000522987 SAMD7Q7Z3H4 446 aa19.97■□□□□ 0.79
MRPS28-209ENST00000522987 IFT57Q9NWB7 429 aa19.97■□□□□ 0.79
MRPS28-209ENST00000522987 CASP8AP2Q9UKL3 1982 aa19.96■□□□□ 0.79
MRPS28-209ENST00000522987 TBC1D10BQ4KMP7 808 aaPredicted RBP19.96■□□□□ 0.79
MRPS28-209ENST00000522987 CCDC184Q52MB2 194 aa19.96■□□□□ 0.79
MRPS28-209ENST00000522987 TMC4Q7Z404 712 aa19.96■□□□□ 0.79
MRPS28-209ENST00000522987 TLL2Q9Y6L7 1015 aa19.96■□□□□ 0.79
MRPS28-209ENST00000522987 ECE2O60344 883 aa19.95■□□□□ 0.78
MRPS28-209ENST00000522987 EGFRP00533 1210 aa19.95■□□□□ 0.78
MRPS28-209ENST00000522987 RPS8P62241 208 aaKnown RBP19.95■□□□□ 0.78
MRPS28-209ENST00000522987 MAP2K1Q02750 393 aaPredicted RBP19.95■□□□□ 0.78
MRPS28-209ENST00000522987 USP48Q86UV5 1035 aa19.95■□□□□ 0.78
MRPS28-209ENST00000522987 TSPYL6Q8N831 410 aa19.95■□□□□ 0.78
MRPS28-209ENST00000522987 H7C1D1 291 aa19.94■□□□□ 0.78
MRPS28-209ENST00000522987 ECE1P42892 770 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms