RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 MPNDQ8N594 471 aa20.42■□□□□ 0.86
CLN8-205ENST00000520991 TSR2Q969E8 191 aaKnown RBP20.42■□□□□ 0.86
CLN8-205ENST00000520991 VPS33BQ9H267 617 aa20.42■□□□□ 0.86
CLN8-205ENST00000520991 DDX58O95786 925 aaKnown RBP20.41■□□□□ 0.86
CLN8-205ENST00000520991 TMC4Q7Z404 712 aa20.41■□□□□ 0.86
CLN8-205ENST00000520991 PNMA8AQ86V59 439 aaPredicted RBP20.41■□□□□ 0.86
CLN8-205ENST00000520991 WWC1Q8IX03 1113 aa20.41■□□□□ 0.86
CLN8-205ENST00000520991 JMYQ8N9B5 988 aa20.41■□□□□ 0.86
CLN8-205ENST00000520991 IRS4O14654 1257 aaPredicted RBP20.4■□□□□ 0.86
CLN8-205ENST00000520991 MYD88Q99836 296 aa20.4■□□□□ 0.86
CLN8-205ENST00000520991 RTFDC1Q9BY42 306 aaPredicted RBP20.4■□□□□ 0.86
CLN8-205ENST00000520991 SF3B3Q15393 1217 aaKnown RBP20.39■□□□□ 0.85
CLN8-205ENST00000520991 TSPYL6Q8N831 410 aa20.39■□□□□ 0.85
CLN8-205ENST00000520991 ZBTB38Q8NAP3 1195 aaPredicted RBP20.39■□□□□ 0.85
CLN8-205ENST00000520991 CREBZFQ9NS37 354 aa20.39■□□□□ 0.85
CLN8-205ENST00000520991 PCNTO95613 3336 aa20.39■□□□□ 0.85
CLN8-205ENST00000520991 TAF1P21675 1872 aa20.38■□□□□ 0.85
CLN8-205ENST00000520991 HSP90B1P14625 803 aaKnown RBP20.38■□□□□ 0.85
CLN8-205ENST00000520991 STK31Q9BXU1 1019 aa20.38■□□□□ 0.85
CLN8-205ENST00000520991 CCDC191Q8NCU4 936 aa20.37■□□□□ 0.85
CLN8-205ENST00000520991 ZNRF3Q9ULT6 936 aa20.37■□□□□ 0.85
CLN8-205ENST00000520991 ADAMTSL1Q8N6G6 1762 aa20.36■□□□□ 0.85
CLN8-205ENST00000520991 IL16Q14005 1332 aa20.36■□□□□ 0.85
CLN8-205ENST00000520991 PASKQ96RG2 1323 aa20.36■□□□□ 0.85
CLN8-205ENST00000520991 SCNN1DP51172 638 aa20.36■□□□□ 0.85
CLN8-205ENST00000520991 KIAA2012Q0VF49 1180 aa20.36■□□□□ 0.85
CLN8-205ENST00000520991 CELF1Q92879 486 aaKnown RBP20.36■□□□□ 0.85
CLN8-205ENST00000520991 METTL22Q9BUU2 404 aaPredicted RBP20.36■□□□□ 0.85
CLN8-205ENST00000520991 CWC25Q9NXE8 425 aaPredicted RBP20.36■□□□□ 0.85
CLN8-205ENST00000520991 LRRC37AA6NMS7 1700 aa20.36■□□□□ 0.85
CLN8-205ENST00000520991 TWISTNBQ3B726 338 aaPredicted RBP20.35■□□□□ 0.85
CLN8-205ENST00000520991 MAP3K2Q9Y2U5 619 aa20.35■□□□□ 0.85
CLN8-205ENST00000520991 LTBP1Q14766 1721 aa20.35■□□□□ 0.85
CLN8-205ENST00000520991 EPS15P42566 896 aa20.34■□□□□ 0.85
CLN8-205ENST00000520991 NCBP3Q53F19 620 aaKnown RBP20.34■□□□□ 0.85
CLN8-205ENST00000520991 MAP1SQ66K74 1059 aaPredicted RBP20.34■□□□□ 0.85
CLN8-205ENST00000520991 CNTROBQ8N137 903 aa20.34■□□□□ 0.85
CLN8-205ENST00000520991 SALL2Q9Y467 1007 aaPredicted RBP20.34■□□□□ 0.85
CLN8-205ENST00000520991 ITGBL1O95965 494 aaPredicted RBP20.33■□□□□ 0.85
CLN8-205ENST00000520991 PCCAP05165 728 aaPredicted RBP20.33■□□□□ 0.85
CLN8-205ENST00000520991 CXCL9Q07325 125 aa20.33■□□□□ 0.85
CLN8-205ENST00000520991 MKRN1Q9UHC7 482 aaKnown RBP20.33■□□□□ 0.85
CLN8-205ENST00000520991 NSFL1CQ9UNZ2 370 aaKnown RBP20.33■□□□□ 0.85
CLN8-205ENST00000520991 DUOX1Q9NRD9 1551 aa20.33■□□□□ 0.85
CLN8-205ENST00000520991 PI4KAP2A4QPH2 592 aa20.32■□□□□ 0.84
CLN8-205ENST00000520991 TMEM88BA6NKF7 163 aa20.32■□□□□ 0.84
CLN8-205ENST00000520991 RAD17O75943 681 aa20.32■□□□□ 0.84
CLN8-205ENST00000520991 RPS8P62241 208 aaKnown RBP20.32■□□□□ 0.84
CLN8-205ENST00000520991 NEXNQ0ZGT2 675 aa20.32■□□□□ 0.84
CLN8-205ENST00000520991 IFFO2Q5TF58 517 aa20.32■□□□□ 0.84
CLN8-205ENST00000520991 CIAPIN1Q6FI81 312 aa20.32■□□□□ 0.84
CLN8-205ENST00000520991 KSR2Q6VAB6 950 aa20.32■□□□□ 0.84
CLN8-205ENST00000520991 PI4KAP1Q8N8J0 262 aa20.32■□□□□ 0.84
CLN8-205ENST00000520991 C6orf229H3BNL8 230 aa20.31■□□□□ 0.84
CLN8-205ENST00000520991 PDE8AO60658 829 aa20.31■□□□□ 0.84
CLN8-205ENST00000520991 TNIP1Q15025 636 aa20.31■□□□□ 0.84
CLN8-205ENST00000520991 WASHC4Q2M389 1173 aa20.31■□□□□ 0.84
CLN8-205ENST00000520991 CCDC152Q4G0S7 254 aa20.31■□□□□ 0.84
CLN8-205ENST00000520991 USP50Q70EL3 339 aaPredicted RBP20.31■□□□□ 0.84
CLN8-205ENST00000520991 JARID2Q92833 1246 aaPredicted RBP20.31■□□□□ 0.84
CLN8-205ENST00000520991 GPRC5DQ9NZD1 345 aa20.31■□□□□ 0.84
CLN8-205ENST00000520991 FANCIQ9NVI1 1328 aa20.31■□□□□ 0.84
CLN8-205ENST00000520991 COL4A1P02462 1669 aa20.3■□□□□ 0.84
CLN8-205ENST00000520991 GMPSP49915 693 aaPredicted RBP20.3■□□□□ 0.84
CLN8-205ENST00000520991 GPSM2P81274 684 aa20.3■□□□□ 0.84
CLN8-205ENST00000520991 BCL2L13Q9BXK5 485 aa20.3■□□□□ 0.84
CLN8-205ENST00000520991 SEC31BQ9NQW1 1179 aa20.3■□□□□ 0.84
CLN8-205ENST00000520991 ADARB2Q9NS39 739 aaKnown RBP20.3■□□□□ 0.84
CLN8-205ENST00000520991 SLC4A2P04920 1241 aa20.29■□□□□ 0.84
CLN8-205ENST00000520991 CCDC85AQ96PX6 553 aaPredicted RBP20.29■□□□□ 0.84
CLN8-205ENST00000520991 EYA3Q99504 573 aa20.29■□□□□ 0.84
CLN8-205ENST00000520991 CNTNAP1P78357 1384 aa20.29■□□□□ 0.84
CLN8-205ENST00000520991 RIMBP2O15034 1052 aa20.28■□□□□ 0.84
CLN8-205ENST00000520991 IGKV5-2P06315 115 aa20.28■□□□□ 0.84
CLN8-205ENST00000520991 WDR63Q8IWG1 891 aa20.28■□□□□ 0.84
CLN8-205ENST00000520991 POLLQ9UGP5 575 aa20.28■□□□□ 0.84
CLN8-205ENST00000520991 CDHR2Q9BYE9 1310 aa20.28■□□□□ 0.84
CLN8-205ENST00000520991 YDJCA8MPS7 323 aa20.27■□□□□ 0.84
CLN8-205ENST00000520991 HSPA1AP0DMV8 641 aaKnown RBP20.27■□□□□ 0.84
CLN8-205ENST00000520991 HSPA1BP0DMV9 641 aaKnown RBP20.27■□□□□ 0.84
CLN8-205ENST00000520991 G2E3Q7L622 706 aa20.27■□□□□ 0.84
CLN8-205ENST00000520991 FAM9BQ8IZU0 186 aa20.27■□□□□ 0.84
CLN8-205ENST00000520991 DBNDD1Q9H9R9 158 aa20.27■□□□□ 0.84
CLN8-205ENST00000520991 ANKIB1Q9P2G1 1089 aa20.27■□□□□ 0.84
CLN8-205ENST00000520991 TBC1D16Q8TBP0 767 aa20.27■□□□□ 0.83
CLN8-205ENST00000520991 CTSWP56202 376 aa20.26■□□□□ 0.83
CLN8-205ENST00000520991 FLIIQ13045 1269 aa20.26■□□□□ 0.83
CLN8-205ENST00000520991 CWF19L2Q2TBE0 894 aaKnown RBP20.26■□□□□ 0.83
CLN8-205ENST00000520991 ANKRD18AQ8IVF6 992 aa20.26■□□□□ 0.83
CLN8-205ENST00000520991 NEURL1BA8MQ27 555 aa20.25■□□□□ 0.83
CLN8-205ENST00000520991 UFL1O94874 794 aa20.25■□□□□ 0.83
CLN8-205ENST00000520991 FKBP5Q13451 457 aaPredicted RBP20.25■□□□□ 0.83
CLN8-205ENST00000520991 GPR101Q96P66 508 aaPredicted RBP20.25■□□□□ 0.83
CLN8-205ENST00000520991 ZC3H12CQ9C0D7 883 aaKnown RBP20.25■□□□□ 0.83
CLN8-205ENST00000520991 PODXL2Q9NZ53 605 aa20.25■□□□□ 0.83
CLN8-205ENST00000520991 GGA1Q9UJY5 639 aa20.25■□□□□ 0.83
CLN8-205ENST00000520991 ABT1Q9ULW3 272 aaKnown RBP20.25■□□□□ 0.83
CLN8-205ENST00000520991 G3V3G9 751 aa20.24■□□□□ 0.83
CLN8-205ENST00000520991 ECE2O60344 883 aa20.24■□□□□ 0.83
CLN8-205ENST00000520991 EXOSC9Q06265 439 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms