RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 HTRA3P83110 453 aa13.84□□□□□ -0.19
PVT1-209ENST00000520913 LDHDQ86WU2 507 aa13.84□□□□□ -0.19
PVT1-209ENST00000520913 NIM1KQ8IY84 436 aa13.84□□□□□ -0.19
PVT1-209ENST00000520913 DNAJC5GQ8N7S2 189 aa13.84□□□□□ -0.19
PVT1-209ENST00000520913 ZNF428Q96B54 188 aa13.84□□□□□ -0.19
PVT1-209ENST00000520913 FAM89AQ96GI7 184 aa13.84□□□□□ -0.19
PVT1-209ENST00000520913 STK31Q9BXU1 1019 aa13.84□□□□□ -0.19
PVT1-209ENST00000520913 VPS33BQ9H267 617 aa13.84□□□□□ -0.19
PVT1-209ENST00000520913 TAF1DQ9H5J8 278 aaPredicted RBP13.84□□□□□ -0.19
PVT1-209ENST00000520913 A0A1B0GUL6 1792 aa13.83□□□□□ -0.19
PVT1-209ENST00000520913 POTEIP0CG38 1075 aa13.83□□□□□ -0.2
PVT1-209ENST00000520913 POTEJP0CG39 1038 aa13.83□□□□□ -0.2
PVT1-209ENST00000520913 HSP90B1P14625 803 aaKnown RBP13.83□□□□□ -0.2
PVT1-209ENST00000520913 AOC3Q16853 763 aa13.83□□□□□ -0.2
PVT1-209ENST00000520913 DPP8Q6V1X1 898 aaPredicted RBP13.83□□□□□ -0.2
PVT1-209ENST00000520913 SP8Q8IXZ3 490 aa13.83□□□□□ -0.2
PVT1-209ENST00000520913 TSPYL6Q8N831 410 aa13.83□□□□□ -0.2
PVT1-209ENST00000520913 KLRG1Q96E93 195 aa13.83□□□□□ -0.2
PVT1-209ENST00000520913 MYD88Q99836 296 aa13.83□□□□□ -0.2
PVT1-209ENST00000520913 RTFDC1Q9BY42 306 aaPredicted RBP13.83□□□□□ -0.2
PVT1-209ENST00000520913 IRS4O14654 1257 aaPredicted RBP13.82□□□□□ -0.2
PVT1-209ENST00000520913 EPHX2P34913 555 aa13.82□□□□□ -0.2
PVT1-209ENST00000520913 SF3B3Q15393 1217 aaKnown RBP13.82□□□□□ -0.2
PVT1-209ENST00000520913 TWISTNBQ3B726 338 aaPredicted RBP13.82□□□□□ -0.2
PVT1-209ENST00000520913 RTL5Q5HYW3 569 aaPredicted RBP13.82□□□□□ -0.2
PVT1-209ENST00000520913 MPNDQ8N594 471 aa13.82□□□□□ -0.2
PVT1-209ENST00000520913 ZBTB38Q8NAP3 1195 aaPredicted RBP13.82□□□□□ -0.2
PVT1-209ENST00000520913 CCDC191Q8NCU4 936 aa13.82□□□□□ -0.2
PVT1-209ENST00000520913 GJA3Q9Y6H8 435 aa13.82□□□□□ -0.2
PVT1-209ENST00000520913 LMOD1P29536 600 aaPredicted RBP13.81□□□□□ -0.2
PVT1-209ENST00000520913 EAPPQ56P03 285 aaPredicted RBP13.81□□□□□ -0.2
PVT1-209ENST00000520913 PNMA8AQ86V59 439 aaPredicted RBP13.81□□□□□ -0.2
PVT1-209ENST00000520913 METTL22Q9BUU2 404 aaPredicted RBP13.81□□□□□ -0.2
PVT1-209ENST00000520913 CWC25Q9NXE8 425 aaPredicted RBP13.81□□□□□ -0.2
PVT1-209ENST00000520913 FANCIQ9NVI1 1328 aa13.81□□□□□ -0.2
PVT1-209ENST00000520913 SCN9AQ15858 1988 aa13.8□□□□□ -0.2
PVT1-209ENST00000520913 PCCAP05165 728 aaPredicted RBP13.8□□□□□ -0.2
PVT1-209ENST00000520913 KIAA2012Q0VF49 1180 aa13.8□□□□□ -0.2
PVT1-209ENST00000520913 ZNF646O15015 1829 aaPredicted RBP13.79□□□□□ -0.2
PVT1-209ENST00000520913 WDR63Q8IWG1 891 aa13.79□□□□□ -0.2
PVT1-209ENST00000520913 JMYQ8N9B5 988 aa13.79□□□□□ -0.2
PVT1-209ENST00000520913 CELF1Q92879 486 aaKnown RBP13.79□□□□□ -0.2
PVT1-209ENST00000520913 MAP3K2Q9Y2U5 619 aa13.79□□□□□ -0.2
PVT1-209ENST00000520913 CDHR2Q9BYE9 1310 aa13.79□□□□□ -0.2
PVT1-209ENST00000520913 PI4KAP2A4QPH2 592 aa13.78□□□□□ -0.2
PVT1-209ENST00000520913 PDE8AO60658 829 aa13.78□□□□□ -0.2
PVT1-209ENST00000520913 SCNN1DP51172 638 aa13.78□□□□□ -0.2
PVT1-209ENST00000520913 NEXNQ0ZGT2 675 aa13.78□□□□□ -0.2
PVT1-209ENST00000520913 CCDC152Q4G0S7 254 aa13.78□□□□□ -0.2
PVT1-209ENST00000520913 KSR2Q6VAB6 950 aa13.78□□□□□ -0.2
PVT1-209ENST00000520913 PI4KAP1Q8N8J0 262 aa13.78□□□□□ -0.2
PVT1-209ENST00000520913 CREBZFQ9NS37 354 aa13.78□□□□□ -0.2
PVT1-209ENST00000520913 ZNRF3Q9ULT6 936 aa13.78□□□□□ -0.2
PVT1-209ENST00000520913 CLEC11AQ9Y240 323 aa13.78□□□□□ -0.2
PVT1-209ENST00000520913 PASKQ96RG2 1323 aa13.78□□□□□ -0.2
PVT1-209ENST00000520913 THSD7BQ9C0I4 1608 aa13.78□□□□□ -0.2
PVT1-209ENST00000520913 SALL2Q9Y467 1007 aaPredicted RBP13.77□□□□□ -0.21
PVT1-209ENST00000520913 FLIIQ13045 1269 aa13.76□□□□□ -0.21
PVT1-209ENST00000520913 CIAPIN1Q6FI81 312 aa13.76□□□□□ -0.21
PVT1-209ENST00000520913 FAM9BQ8IZU0 186 aa13.76□□□□□ -0.21
PVT1-209ENST00000520913 SLC4A2P04920 1241 aa13.75□□□□□ -0.21
PVT1-209ENST00000520913 IGKV5-2P06315 115 aa13.75□□□□□ -0.21
PVT1-209ENST00000520913 RPS8P62241 208 aaKnown RBP13.75□□□□□ -0.21
PVT1-209ENST00000520913 CXCL9Q07325 125 aa13.75□□□□□ -0.21
PVT1-209ENST00000520913 WASHC4Q2M389 1173 aa13.75□□□□□ -0.21
PVT1-209ENST00000520913 USP50Q70EL3 339 aaPredicted RBP13.75□□□□□ -0.21
PVT1-209ENST00000520913 G2E3Q7L622 706 aa13.75□□□□□ -0.21
PVT1-209ENST00000520913 EYA3Q99504 573 aa13.75□□□□□ -0.21
PVT1-209ENST00000520913 ADARB2Q9NS39 739 aaKnown RBP13.75□□□□□ -0.21
PVT1-209ENST00000520913 GPRC5DQ9NZD1 345 aa13.75□□□□□ -0.21
PVT1-209ENST00000520913 NSFL1CQ9UNZ2 370 aaKnown RBP13.75□□□□□ -0.21
PVT1-209ENST00000520913 CNTNAP1P78357 1384 aa13.74□□□□□ -0.21
PVT1-209ENST00000520913 RTL9Q8NET4 1388 aa13.74□□□□□ -0.21
PVT1-209ENST00000520913 NEURL1BA8MQ27 555 aa13.74□□□□□ -0.21
PVT1-209ENST00000520913 C6orf229H3BNL8 230 aa13.74□□□□□ -0.21
PVT1-209ENST00000520913 ITGBL1O95965 494 aaPredicted RBP13.74□□□□□ -0.21
PVT1-209ENST00000520913 EPS15P42566 896 aa13.74□□□□□ -0.21
PVT1-209ENST00000520913 CTSWP56202 376 aa13.74□□□□□ -0.21
PVT1-209ENST00000520913 GPSM2P81274 684 aa13.74□□□□□ -0.21
PVT1-209ENST00000520913 FKBP5Q13451 457 aaPredicted RBP13.74□□□□□ -0.21
PVT1-209ENST00000520913 TNIP1Q15025 636 aa13.74□□□□□ -0.21
PVT1-209ENST00000520913 CWF19L2Q2TBE0 894 aaKnown RBP13.74□□□□□ -0.21
PVT1-209ENST00000520913 MAP1SQ66K74 1059 aaPredicted RBP13.74□□□□□ -0.21
PVT1-209ENST00000520913 MYH16Q9H6N6 1097 aa13.74□□□□□ -0.21
PVT1-209ENST00000520913 SEC31BQ9NQW1 1179 aa13.74□□□□□ -0.21
PVT1-209ENST00000520913 POLR2AP24928 1970 aaKnown RBP13.74□□□□□ -0.21
PVT1-209ENST00000520913 TMEM88BA6NKF7 163 aa13.73□□□□□ -0.21
PVT1-209ENST00000520913 YDJCA8MPS7 323 aa13.73□□□□□ -0.21
PVT1-209ENST00000520913 RAD17O75943 681 aa13.73□□□□□ -0.21
PVT1-209ENST00000520913 GMPSP49915 693 aaPredicted RBP13.73□□□□□ -0.21
PVT1-209ENST00000520913 EXOSC9Q06265 439 aaKnown RBP13.73□□□□□ -0.21
PVT1-209ENST00000520913 CNTROBQ8N137 903 aa13.73□□□□□ -0.21
PVT1-209ENST00000520913 CDC5LQ99459 802 aaKnown RBP13.73□□□□□ -0.21
PVT1-209ENST00000520913 BCL2L13Q9BXK5 485 aa13.73□□□□□ -0.21
PVT1-209ENST00000520913 PODXL2Q9NZ53 605 aa13.73□□□□□ -0.21
PVT1-209ENST00000520913 VAMP4O75379 141 aa13.72□□□□□ -0.21
PVT1-209ENST00000520913 UFL1O94874 794 aa13.72□□□□□ -0.21
PVT1-209ENST00000520913 ANKRD18AQ8IVF6 992 aa13.72□□□□□ -0.21
PVT1-209ENST00000520913 TBC1D16Q8TBP0 767 aa13.72□□□□□ -0.21
PVT1-209ENST00000520913 DNAAF4Q8WXU2 420 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms