RNA–Protein interactions for RNA: ENST00000520709.5

TMEM55A-205, humanhuman

TSL 3

Gene TMEM55A, Length 649 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-205ENST00000520709 CXCL9Q07325 125 aa17.68■□□□□ 0.42
TMEM55A-205ENST00000520709 KIAA2012Q0VF49 1180 aa17.68■□□□□ 0.42
TMEM55A-205ENST00000520709 NEUROD2Q15784 382 aa17.68■□□□□ 0.42
TMEM55A-205ENST00000520709 DEFB115Q30KQ5 88 aa17.68■□□□□ 0.42
TMEM55A-205ENST00000520709 ISCA1Q9BUE6 129 aa17.68■□□□□ 0.42
TMEM55A-205ENST00000520709 TRMT112Q9UI30 125 aaKnown RBP17.68■□□□□ 0.42
TMEM55A-205ENST00000520709 ZNRF3Q9ULT6 936 aa17.68■□□□□ 0.42
TMEM55A-205ENST00000520709 DDX10Q13206 875 aaKnown RBP17.67■□□□□ 0.42
TMEM55A-205ENST00000520709 HDGFL1Q5TGJ6 251 aa17.67■□□□□ 0.42
TMEM55A-205ENST00000520709 DPP8Q6V1X1 898 aaPredicted RBP17.67■□□□□ 0.42
TMEM55A-205ENST00000520709 MPNDQ8N594 471 aa17.67■□□□□ 0.42
TMEM55A-205ENST00000520709 PLBD2Q8NHP8 589 aa17.67■□□□□ 0.42
TMEM55A-205ENST00000520709 ADARB2Q9NS39 739 aaKnown RBP17.67■□□□□ 0.42
TMEM55A-205ENST00000520709 ZNF646O15015 1829 aaPredicted RBP17.67■□□□□ 0.42
TMEM55A-205ENST00000520709 SPEF2Q9C093 1822 aa17.67■□□□□ 0.42
TMEM55A-205ENST00000520709 WDR33Q9C0J8 1336 aaKnown RBP17.67■□□□□ 0.42
TMEM55A-205ENST00000520709 CTCFP49711 727 aaPredicted RBP17.66■□□□□ 0.42
TMEM55A-205ENST00000520709 DDX46Q7L014 1031 aaKnown RBP17.66■□□□□ 0.42
TMEM55A-205ENST00000520709 TMX4Q9H1E5 349 aaPredicted RBP17.66■□□□□ 0.42
TMEM55A-205ENST00000520709 ADAMTS8Q9UP79 889 aa17.66■□□□□ 0.42
TMEM55A-205ENST00000520709 WDR43Q15061 677 aaKnown RBP eCLIP17.65■□□□□ 0.42
TMEM55A-205ENST00000520709 CST9Q5W186 159 aa17.65■□□□□ 0.42
TMEM55A-205ENST00000520709 TMC4Q7Z404 712 aa17.65■□□□□ 0.42
TMEM55A-205ENST00000520709 CFAP44Q96MT7 982 aa17.65■□□□□ 0.42
TMEM55A-205ENST00000520709 YDJCA8MPS7 323 aa17.64■□□□□ 0.41
TMEM55A-205ENST00000520709 TRAF5O00463 557 aa17.64■□□□□ 0.41
TMEM55A-205ENST00000520709 ZNF853P0CG23 659 aa17.64■□□□□ 0.41
TMEM55A-205ENST00000520709 GMPSP49915 693 aaPredicted RBP17.64■□□□□ 0.41
TMEM55A-205ENST00000520709 SF3B3Q15393 1217 aaKnown RBP17.64■□□□□ 0.41
TMEM55A-205ENST00000520709 AIDAQ96BJ3 306 aa17.64■□□□□ 0.41
TMEM55A-205ENST00000520709 DBF4Q9UBU7 674 aaPredicted RBP17.64■□□□□ 0.41
TMEM55A-205ENST00000520709 PGAP2Q9UHJ9 254 aa17.64■□□□□ 0.41
TMEM55A-205ENST00000520709 ABT1Q9ULW3 272 aaKnown RBP17.64■□□□□ 0.41
TMEM55A-205ENST00000520709 LAS1LQ9Y4W2 734 aaKnown RBP17.64■□□□□ 0.41
TMEM55A-205ENST00000520709 HSPA8P11142 646 aaKnown RBP17.63■□□□□ 0.41
TMEM55A-205ENST00000520709 CIAPIN1Q6FI81 312 aa17.63■□□□□ 0.41
TMEM55A-205ENST00000520709 ANKRD13DQ6ZTN6 518 aa17.63■□□□□ 0.41
TMEM55A-205ENST00000520709 MBIPQ9NS73 344 aa17.63■□□□□ 0.41
TMEM55A-205ENST00000520709 TLL2Q9Y6L7 1015 aa17.63■□□□□ 0.41
TMEM55A-205ENST00000520709 TRIM28Q13263 835 aaKnown RBP17.62■□□□□ 0.41
TMEM55A-205ENST00000520709 DUSP27Q5VZP5 1158 aa17.62■□□□□ 0.41
TMEM55A-205ENST00000520709 CELF1Q92879 486 aaKnown RBP17.62■□□□□ 0.41
TMEM55A-205ENST00000520709 FAM89AQ96GI7 184 aa17.62■□□□□ 0.41
TMEM55A-205ENST00000520709 HYPKQ9NX55 129 aa17.62■□□□□ 0.41
TMEM55A-205ENST00000520709 CACNA1FO60840 1977 aa17.61■□□□□ 0.41
TMEM55A-205ENST00000520709 RAD17O75943 681 aa17.61■□□□□ 0.41
TMEM55A-205ENST00000520709 LBX1P52954 281 aa17.61■□□□□ 0.41
TMEM55A-205ENST00000520709 HIRAP54198 1017 aaPredicted RBP17.61■□□□□ 0.41
TMEM55A-205ENST00000520709 MAP2K1Q02750 393 aaPredicted RBP17.61■□□□□ 0.41
TMEM55A-205ENST00000520709 TRPM4Q8TD43 1214 aa17.61■□□□□ 0.41
TMEM55A-205ENST00000520709 ZNF428Q96B54 188 aa17.61■□□□□ 0.41
TMEM55A-205ENST00000520709 CAPNS2Q96L46 248 aa17.61■□□□□ 0.41
TMEM55A-205ENST00000520709 PRKRIP1Q9H875 184 aaPredicted RBP17.61■□□□□ 0.41
TMEM55A-205ENST00000520709 ATP5J2-PTCD1G3V325 749 aa17.6■□□□□ 0.41
TMEM55A-205ENST00000520709 TNIP1Q15025 636 aa17.6■□□□□ 0.41
TMEM55A-205ENST00000520709 CYP4F22Q6NT55 531 aa17.6■□□□□ 0.41
TMEM55A-205ENST00000520709 SHTN1A0MZ66 631 aa17.59■□□□□ 0.41
TMEM55A-205ENST00000520709 ZC3H15Q8WU90 426 aaKnown RBP17.59■□□□□ 0.41
TMEM55A-205ENST00000520709 GLIS2Q9BZE0 524 aaPredicted RBP17.59■□□□□ 0.41
TMEM55A-205ENST00000520709 ZNF609O15014 1411 aa17.58■□□□□ 0.41
TMEM55A-205ENST00000520709 ECE1P42892 770 aa17.58■□□□□ 0.4
TMEM55A-205ENST00000520709 SAPCD2Q86UD0 394 aa17.58■□□□□ 0.4
TMEM55A-205ENST00000520709 IFT57Q9NWB7 429 aa17.58■□□□□ 0.4
TMEM55A-205ENST00000520709 CASP8AP2Q9UKL3 1982 aa17.58■□□□□ 0.4
TMEM55A-205ENST00000520709 RTL9Q8NET4 1388 aa17.57■□□□□ 0.4
TMEM55A-205ENST00000520709 IRS4O14654 1257 aaPredicted RBP17.57■□□□□ 0.4
TMEM55A-205ENST00000520709 GPSM2P81274 684 aa17.57■□□□□ 0.4
TMEM55A-205ENST00000520709 HHIPL1Q96JK4 782 aa17.57■□□□□ 0.4
TMEM55A-205ENST00000520709 POLLQ9UGP5 575 aa17.57■□□□□ 0.4
TMEM55A-205ENST00000520709 A0A1B0GUL6 1792 aa17.57■□□□□ 0.4
TMEM55A-205ENST00000520709 CELF2O95319 508 aaKnown RBP17.56■□□□□ 0.4
TMEM55A-205ENST00000520709 WASHC4Q2M389 1173 aa17.56■□□□□ 0.4
TMEM55A-205ENST00000520709 DPF2Q92785 391 aa17.56■□□□□ 0.4
TMEM55A-205ENST00000520709 BCL2L13Q9BXK5 485 aa17.56■□□□□ 0.4
TMEM55A-205ENST00000520709 PHAXQ9H814 394 aaKnown RBP17.56■□□□□ 0.4
TMEM55A-205ENST00000520709 CNOT7Q9UIV1 285 aaKnown RBP17.56■□□□□ 0.4
TMEM55A-205ENST00000520709 AKAP11Q9UKA4 1901 aa17.55■□□□□ 0.4
TMEM55A-205ENST00000520709 PSMD14O00487 310 aa17.55■□□□□ 0.4
TMEM55A-205ENST00000520709 RTL5Q5HYW3 569 aaPredicted RBP17.55■□□□□ 0.4
TMEM55A-205ENST00000520709 MICALL2Q8IY33 904 aa17.55■□□□□ 0.4
TMEM55A-205ENST00000520709 ZBTB38Q8NAP3 1195 aaPredicted RBP17.55■□□□□ 0.4
TMEM55A-205ENST00000520709 GPR101Q96P66 508 aaPredicted RBP17.55■□□□□ 0.4
TMEM55A-205ENST00000520709 DBNDD1Q9H9R9 158 aa17.55■□□□□ 0.4
TMEM55A-205ENST00000520709 NSFL1CQ9UNZ2 370 aaKnown RBP17.55■□□□□ 0.4
TMEM55A-205ENST00000520709 ZBTB12Q9Y330 459 aaPredicted RBP17.55■□□□□ 0.4
TMEM55A-205ENST00000520709 APAF1O14727 1248 aa17.54■□□□□ 0.4
TMEM55A-205ENST00000520709 AOC2O75106 756 aa17.54■□□□□ 0.4
TMEM55A-205ENST00000520709 MAP2K2P36507 400 aa17.54■□□□□ 0.4
TMEM55A-205ENST00000520709 GNAI1P63096 354 aa17.54■□□□□ 0.4
TMEM55A-205ENST00000520709 GOLGA2Q08379 1002 aa17.54■□□□□ 0.4
TMEM55A-205ENST00000520709 TBC1D16Q8TBP0 767 aa17.54■□□□□ 0.4
TMEM55A-205ENST00000520709 PODXL2Q9NZ53 605 aa17.54■□□□□ 0.4
TMEM55A-205ENST00000520709 ECE2O60344 883 aa17.53■□□□□ 0.4
TMEM55A-205ENST00000520709 EGFRP00533 1210 aa17.53■□□□□ 0.4
TMEM55A-205ENST00000520709 RPS8P62241 208 aaKnown RBP17.53■□□□□ 0.4
TMEM55A-205ENST00000520709 PAXIP1Q6ZW49 1069 aaPredicted RBP17.53■□□□□ 0.4
TMEM55A-205ENST00000520709 CDC37L1Q7L3B6 337 aa17.53■□□□□ 0.4
TMEM55A-205ENST00000520709 RIC3Q7Z5B4 369 aa17.53■□□□□ 0.4
TMEM55A-205ENST00000520709 H7C1D1 291 aa17.52■□□□□ 0.4
TMEM55A-205ENST00000520709 PCCAP05165 728 aaPredicted RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms