RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 SLC4A10Q6U841 1118 aa23.36■■□□□ 1.33
SREK1-207ENST00000520058 MRPL50Q8N5N7 158 aaKnown RBP23.36■■□□□ 1.33
SREK1-207ENST00000520058 GRAPLQ8TC17 118 aaPredicted RBP23.36■■□□□ 1.33
SREK1-207ENST00000520058 SMC4Q9NTJ3 1288 aa23.36■■□□□ 1.33
SREK1-207ENST00000520058 SSH1Q8WYL5 1049 aa23.35■■□□□ 1.33
SREK1-207ENST00000520058 ATP6V0A2Q9Y487 856 aa23.35■■□□□ 1.33
SREK1-207ENST00000520058 KDM2BQ8NHM5 1336 aa23.34■■□□□ 1.33
SREK1-207ENST00000520058 F6X3S4 739 aa23.34■■□□□ 1.33
SREK1-207ENST00000520058 UBE3BQ7Z3V4 1068 aa23.34■■□□□ 1.33
SREK1-207ENST00000520058 ALDH1L1O75891 902 aa23.33■■□□□ 1.33
SREK1-207ENST00000520058 SP8Q8IXZ3 490 aa23.33■■□□□ 1.33
SREK1-207ENST00000520058 ZNF526Q8TF50 670 aaPredicted RBP23.33■■□□□ 1.33
SREK1-207ENST00000520058 PSMD1Q99460 953 aa23.33■■□□□ 1.33
SREK1-207ENST00000520058 SRCIN1Q9C0H9 1055 aa23.33■■□□□ 1.33
SREK1-207ENST00000520058 ZBED9Q6R2W3 1325 aa23.33■■□□□ 1.32
SREK1-207ENST00000520058 H7C1W4 665 aa23.32■■□□□ 1.32
SREK1-207ENST00000520058 DPY19L2Q6NUT2 758 aa23.32■■□□□ 1.32
SREK1-207ENST00000520058 SUPT20HQ8NEM7 779 aa23.32■■□□□ 1.32
SREK1-207ENST00000520058 JARID2Q92833 1246 aaPredicted RBP23.32■■□□□ 1.32
SREK1-207ENST00000520058 BEND3Q5T5X7 828 aa23.31■■□□□ 1.32
SREK1-207ENST00000520058 BCL2L13Q9BXK5 485 aa23.31■■□□□ 1.32
SREK1-207ENST00000520058 C9orf78Q9NZ63 289 aaPredicted RBP23.31■■□□□ 1.32
SREK1-207ENST00000520058 CTSWP56202 376 aa23.3■■□□□ 1.32
SREK1-207ENST00000520058 RPS8P62241 208 aaKnown RBP23.3■■□□□ 1.32
SREK1-207ENST00000520058 CDC5LQ99459 802 aaKnown RBP23.3■■□□□ 1.32
SREK1-207ENST00000520058 OLFM4Q6UX06 510 aa23.29■■□□□ 1.32
SREK1-207ENST00000520058 JDP2Q8WYK2 163 aa23.29■■□□□ 1.32
SREK1-207ENST00000520058 LRRC37AA6NMS7 1700 aa23.28■■□□□ 1.32
SREK1-207ENST00000520058 IARSP41252 1262 aaKnown RBP23.28■■□□□ 1.32
SREK1-207ENST00000520058 DPP8Q6V1X1 898 aaPredicted RBP23.28■■□□□ 1.32
SREK1-207ENST00000520058 MPNDQ8N594 471 aa23.28■■□□□ 1.32
SREK1-207ENST00000520058 VPS33BQ9H267 617 aa23.28■■□□□ 1.32
SREK1-207ENST00000520058 ZNF277Q9NRM2 450 aaPredicted RBP23.28■■□□□ 1.32
SREK1-207ENST00000520058 SPEF2Q9C093 1822 aa23.28■■□□□ 1.32
SREK1-207ENST00000520058 GRM8O00222 908 aa23.27■■□□□ 1.32
SREK1-207ENST00000520058 ANKRD18AQ8IVF6 992 aa23.27■■□□□ 1.32
SREK1-207ENST00000520058 CELF1Q92879 486 aaKnown RBP23.27■■□□□ 1.32
SREK1-207ENST00000520058 PLA2G12BQ9BX93 195 aa23.27■■□□□ 1.32
SREK1-207ENST00000520058 KIF16BQ96L93 1317 aa23.27■■□□□ 1.32
SREK1-207ENST00000520058 BRPF1P55201 1214 aaPredicted RBP23.26■■□□□ 1.31
SREK1-207ENST00000520058 TTLL11Q8NHH1 800 aa23.26■■□□□ 1.31
SREK1-207ENST00000520058 CCDC85AQ96PX6 553 aaPredicted RBP23.26■■□□□ 1.31
SREK1-207ENST00000520058 API5Q9BZZ5 524 aaKnown RBP23.26■■□□□ 1.31
SREK1-207ENST00000520058 GLTPD2A6NH11 291 aa23.25■■□□□ 1.31
SREK1-207ENST00000520058 IPO8O15397 1037 aaKnown RBP23.25■■□□□ 1.31
SREK1-207ENST00000520058 PRELPP51888 382 aa23.25■■□□□ 1.31
SREK1-207ENST00000520058 RARSP54136 660 aaKnown RBP23.25■■□□□ 1.31
SREK1-207ENST00000520058 LARGE2Q8N3Y3 721 aa23.24■■□□□ 1.31
SREK1-207ENST00000520058 RTL9Q8NET4 1388 aa23.24■■□□□ 1.31
SREK1-207ENST00000520058 IGHMBP2P38935 993 aaKnown RBP23.23■■□□□ 1.31
SREK1-207ENST00000520058 C16orf71Q8IYS4 520 aaPredicted RBP23.23■■□□□ 1.31
SREK1-207ENST00000520058 SEC31BQ9NQW1 1179 aa23.23■■□□□ 1.31
SREK1-207ENST00000520058 NOB1Q9ULX3 412 aaKnown RBP23.23■■□□□ 1.31
SREK1-207ENST00000520058 NSFL1CQ9UNZ2 370 aaKnown RBP23.23■■□□□ 1.31
SREK1-207ENST00000520058 SNED1Q8TER0 1413 aa23.23■■□□□ 1.31
SREK1-207ENST00000520058 PPIP5K2O43314 1243 aa23.22■■□□□ 1.31
SREK1-207ENST00000520058 CCT4P50991 539 aaKnown RBP23.22■■□□□ 1.31
SREK1-207ENST00000520058 CASP7P55210 303 aa23.22■■□□□ 1.31
SREK1-207ENST00000520058 ARHGAP45Q92619 1136 aa23.22■■□□□ 1.31
SREK1-207ENST00000520058 RTFDC1Q9BY42 306 aaPredicted RBP23.22■■□□□ 1.31
SREK1-207ENST00000520058 NIM1KQ8IY84 436 aa23.21■■□□□ 1.31
SREK1-207ENST00000520058 EYA3Q99504 573 aa23.21■■□□□ 1.31
SREK1-207ENST00000520058 GREM2Q9H772 168 aa23.21■■□□□ 1.31
SREK1-207ENST00000520058 ANKIB1Q9P2G1 1089 aa23.21■■□□□ 1.31
SREK1-207ENST00000520058 CHMP3Q9Y3E7 222 aa23.21■■□□□ 1.31
SREK1-207ENST00000520058 ANKRD18BA2A2Z9 1011 aa23.2■■□□□ 1.3
SREK1-207ENST00000520058 EIF6P56537 245 aaKnown RBP23.2■■□□□ 1.3
SREK1-207ENST00000520058 MPHOSPH8Q99549 860 aa23.2■■□□□ 1.3
SREK1-207ENST00000520058 HDAC5Q9UQL6 1122 aa23.2■■□□□ 1.3
SREK1-207ENST00000520058 SCN4AP35499 1836 aa23.19■■□□□ 1.3
SREK1-207ENST00000520058 C6orf229H3BNL8 230 aa23.19■■□□□ 1.3
SREK1-207ENST00000520058 CSF1RP07333 972 aa23.19■■□□□ 1.3
SREK1-207ENST00000520058 ITGA6P23229 1130 aa23.19■■□□□ 1.3
SREK1-207ENST00000520058 IFIT5Q13325 482 aaKnown RBP23.19■■□□□ 1.3
SREK1-207ENST00000520058 VEGFAP15692 232 aaPredicted RBP23.18■■□□□ 1.3
SREK1-207ENST00000520058 CCDC57Q2TAC2 916 aa23.18■■□□□ 1.3
SREK1-207ENST00000520058 BSDC1Q9NW68 430 aaPredicted RBP23.18■■□□□ 1.3
SREK1-207ENST00000520058 WDR90Q96KV7 1748 aa23.18■■□□□ 1.3
SREK1-207ENST00000520058 WASHC4Q2M389 1173 aa23.17■■□□□ 1.3
SREK1-207ENST00000520058 TAF7LQ5H9L4 462 aa23.17■■□□□ 1.3
SREK1-207ENST00000520058 RRAGCQ9HB90 399 aa23.17■■□□□ 1.3
SREK1-207ENST00000520058 NMRK2Q9NPI5 230 aa23.17■■□□□ 1.3
SREK1-207ENST00000520058 UTYO14607 1347 aa23.16■■□□□ 1.3
SREK1-207ENST00000520058 XDHP47989 1333 aa23.16■■□□□ 1.3
SREK1-207ENST00000520058 FZD9O00144 591 aa23.16■■□□□ 1.3
SREK1-207ENST00000520058 GPSM2P81274 684 aa23.16■■□□□ 1.3
SREK1-207ENST00000520058 KIAA2012Q0VF49 1180 aa23.16■■□□□ 1.3
SREK1-207ENST00000520058 AOC3Q16853 763 aa23.16■■□□□ 1.3
SREK1-207ENST00000520058 FAM161AQ3B820 660 aa23.16■■□□□ 1.3
SREK1-207ENST00000520058 FRAT1Q92837 279 aaPredicted RBP23.16■■□□□ 1.3
SREK1-207ENST00000520058 PODXL2Q9NZ53 605 aa23.16■■□□□ 1.3
SREK1-207ENST00000520058 GGA1Q9UJY5 639 aa23.16■■□□□ 1.3
SREK1-207ENST00000520058 IQCA1LA6NCM1 817 aa23.15■■□□□ 1.3
SREK1-207ENST00000520058 G3V3G9 751 aa23.15■■□□□ 1.3
SREK1-207ENST00000520058 FOXO4P98177 505 aa23.15■■□□□ 1.3
SREK1-207ENST00000520058 DCAF8Q5TAQ9 597 aa23.15■■□□□ 1.3
SREK1-207ENST00000520058 LMBR1LQ6UX01 489 aa23.15■■□□□ 1.3
SREK1-207ENST00000520058 LTBP1Q14766 1721 aa23.15■■□□□ 1.3
SREK1-207ENST00000520058 NBPF7P0C2Y1 421 aaPredicted RBP23.14■■□□□ 1.29
SREK1-207ENST00000520058 GPC2Q8N158 579 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms