RNA–Protein interactions for RNA: ENST00000516882.1

SCARNA18.2-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 84 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.2-201ENST00000516882 SP8Q8IXZ3 490 aa9.09□□□□□ -0.95
SCARNA18.2-201ENST00000516882 GRAPLQ8TC17 118 aaPredicted RBP9.09□□□□□ -0.95
SCARNA18.2-201ENST00000516882 ATP6V0A2Q9Y487 856 aa9.09□□□□□ -0.95
SCARNA18.2-201ENST00000516882 LRRC37AA6NMS7 1700 aa9.08□□□□□ -0.96
SCARNA18.2-201ENST00000516882 IQCA1LA6NCM1 817 aa9.08□□□□□ -0.96
SCARNA18.2-201ENST00000516882 PDE8AO60658 829 aa9.08□□□□□ -0.96
SCARNA18.2-201ENST00000516882 EIF6P56537 245 aaKnown RBP9.08□□□□□ -0.96
SCARNA18.2-201ENST00000516882 SF3B3Q15393 1217 aaKnown RBP9.08□□□□□ -0.96
SCARNA18.2-201ENST00000516882 CCDC152Q4G0S7 254 aa9.08□□□□□ -0.96
SCARNA18.2-201ENST00000516882 DPP8Q6V1X1 898 aaPredicted RBP9.08□□□□□ -0.96
SCARNA18.2-201ENST00000516882 LARGE2Q8N3Y3 721 aa9.08□□□□□ -0.96
SCARNA18.2-201ENST00000516882 MPNDQ8N594 471 aa9.08□□□□□ -0.96
SCARNA18.2-201ENST00000516882 RBM46Q8TBY0 533 aaKnown RBP9.08□□□□□ -0.96
SCARNA18.2-201ENST00000516882 VPS33BQ9H267 617 aa9.08□□□□□ -0.96
SCARNA18.2-201ENST00000516882 PPIP5K2O43314 1243 aa9.07□□□□□ -0.96
SCARNA18.2-201ENST00000516882 G2E3Q7L622 706 aa9.07□□□□□ -0.96
SCARNA18.2-201ENST00000516882 NIM1KQ8IY84 436 aa9.07□□□□□ -0.96
SCARNA18.2-201ENST00000516882 DNAAF4Q8WXU2 420 aa9.07□□□□□ -0.96
SCARNA18.2-201ENST00000516882 SPINK5Q9NQ38 1064 aaPredicted RBP9.07□□□□□ -0.96
SCARNA18.2-201ENST00000516882 ZNF521Q96K83 1311 aa9.06□□□□□ -0.96
SCARNA18.2-201ENST00000516882 CDHR2Q9BYE9 1310 aa9.06□□□□□ -0.96
SCARNA18.2-201ENST00000516882 POLR2AP24928 1970 aaKnown RBP9.06□□□□□ -0.96
SCARNA18.2-201ENST00000516882 NEURL1BA8MQ27 555 aa9.06□□□□□ -0.96
SCARNA18.2-201ENST00000516882 DDNO94850 711 aaPredicted RBP9.06□□□□□ -0.96
SCARNA18.2-201ENST00000516882 HSPA6P17066 643 aa9.06□□□□□ -0.96
SCARNA18.2-201ENST00000516882 RPS8P62241 208 aaKnown RBP9.06□□□□□ -0.96
SCARNA18.2-201ENST00000516882 FSTL1Q12841 308 aa9.06□□□□□ -0.96
SCARNA18.2-201ENST00000516882 CWF19L2Q2TBE0 894 aaKnown RBP9.06□□□□□ -0.96
SCARNA18.2-201ENST00000516882 SMC1BQ8NDV3 1235 aa9.06□□□□□ -0.96
SCARNA18.2-201ENST00000516882 LINS1Q8NG48 757 aa9.06□□□□□ -0.96
SCARNA18.2-201ENST00000516882 FZD9O00144 591 aa9.05□□□□□ -0.96
SCARNA18.2-201ENST00000516882 IGKV5-2P06315 115 aa9.05□□□□□ -0.96
SCARNA18.2-201ENST00000516882 LMOD1P29536 600 aaPredicted RBP9.05□□□□□ -0.96
SCARNA18.2-201ENST00000516882 GCKRQ14397 625 aa9.05□□□□□ -0.96
SCARNA18.2-201ENST00000516882 UBE3BQ7Z3V4 1068 aa9.05□□□□□ -0.96
SCARNA18.2-201ENST00000516882 ANKRD18AQ8IVF6 992 aa9.05□□□□□ -0.96
SCARNA18.2-201ENST00000516882 GPC2Q8N158 579 aa9.05□□□□□ -0.96
SCARNA18.2-201ENST00000516882 JARID2Q92833 1246 aaPredicted RBP9.05□□□□□ -0.96
SCARNA18.2-201ENST00000516882 CDC5LQ99459 802 aaKnown RBP9.05□□□□□ -0.96
SCARNA18.2-201ENST00000516882 NSFL1CQ9UNZ2 370 aaKnown RBP9.05□□□□□ -0.96
SCARNA18.2-201ENST00000516882 SNED1Q8TER0 1413 aa9.05□□□□□ -0.96
SCARNA18.2-201ENST00000516882 PSME4Q14997 1843 aa9.04□□□□□ -0.96
SCARNA18.2-201ENST00000516882 G3V3G9 751 aa9.04□□□□□ -0.96
SCARNA18.2-201ENST00000516882 C6orf229H3BNL8 230 aa9.04□□□□□ -0.96
SCARNA18.2-201ENST00000516882 APLP1P51693 650 aa9.04□□□□□ -0.96
SCARNA18.2-201ENST00000516882 CTSWP56202 376 aa9.04□□□□□ -0.96
SCARNA18.2-201ENST00000516882 SLFN5Q08AF3 891 aa9.04□□□□□ -0.96
SCARNA18.2-201ENST00000516882 AOC3Q16853 763 aa9.04□□□□□ -0.96
SCARNA18.2-201ENST00000516882 WASHC4Q2M389 1173 aa9.04□□□□□ -0.96
SCARNA18.2-201ENST00000516882 DCAF8Q5TAQ9 597 aa9.04□□□□□ -0.96
SCARNA18.2-201ENST00000516882 SLC4A10Q6U841 1118 aa9.04□□□□□ -0.96
SCARNA18.2-201ENST00000516882 CELF1Q92879 486 aaKnown RBP9.04□□□□□ -0.96
SCARNA18.2-201ENST00000516882 L3MBTL3Q96JM7 780 aaPredicted RBP9.04□□□□□ -0.96
SCARNA18.2-201ENST00000516882 CCDC85AQ96PX6 553 aaPredicted RBP9.04□□□□□ -0.96
SCARNA18.2-201ENST00000516882 EYA3Q99504 573 aa9.04□□□□□ -0.96
SCARNA18.2-201ENST00000516882 RTFDC1Q9BY42 306 aaPredicted RBP9.04□□□□□ -0.96
SCARNA18.2-201ENST00000516882 ANKIB1Q9P2G1 1089 aa9.04□□□□□ -0.96
SCARNA18.2-201ENST00000516882 HACL1Q9UJ83 578 aa9.04□□□□□ -0.96
SCARNA18.2-201ENST00000516882 GJA3Q9Y6H8 435 aa9.04□□□□□ -0.96
SCARNA18.2-201ENST00000516882 TRPM7Q96QT4 1865 aa9.04□□□□□ -0.96
SCARNA18.2-201ENST00000516882 ZNF541Q9H0D2 1346 aa9.04□□□□□ -0.96
SCARNA18.2-201ENST00000516882 F6X3S4 739 aa9.03□□□□□ -0.96
SCARNA18.2-201ENST00000516882 H7C1W4 665 aa9.03□□□□□ -0.96
SCARNA18.2-201ENST00000516882 IGHMBP2P38935 993 aaKnown RBP9.03□□□□□ -0.96
SCARNA18.2-201ENST00000516882 KIAA2012Q0VF49 1180 aa9.03□□□□□ -0.96
SCARNA18.2-201ENST00000516882 C9orf78Q9NZ63 289 aaPredicted RBP9.03□□□□□ -0.96
SCARNA18.2-201ENST00000516882 ZNRF3Q9ULT6 936 aa9.03□□□□□ -0.96
SCARNA18.2-201ENST00000516882 PTPRCP08575 1304 aa9.03□□□□□ -0.96
SCARNA18.2-201ENST00000516882 LTBP1Q14766 1721 aa9.02□□□□□ -0.96
SCARNA18.2-201ENST00000516882 CT47B1P0C2W7 299 aaPredicted RBP9.02□□□□□ -0.97
SCARNA18.2-201ENST00000516882 TNIP1Q15025 636 aa9.02□□□□□ -0.97
SCARNA18.2-201ENST00000516882 EAPPQ56P03 285 aaPredicted RBP9.02□□□□□ -0.97
SCARNA18.2-201ENST00000516882 PNMA8AQ86V59 439 aaPredicted RBP9.02□□□□□ -0.97
SCARNA18.2-201ENST00000516882 MIER1Q8N108 512 aa9.02□□□□□ -0.97
SCARNA18.2-201ENST00000516882 TTLL11Q8NHH1 800 aa9.02□□□□□ -0.97
SCARNA18.2-201ENST00000516882 MPHOSPH8Q99549 860 aa9.02□□□□□ -0.97
SCARNA18.2-201ENST00000516882 PLA2G12BQ9BX93 195 aa9.02□□□□□ -0.97
SCARNA18.2-201ENST00000516882 ZC3H12CQ9C0D7 883 aaKnown RBP9.02□□□□□ -0.97
SCARNA18.2-201ENST00000516882 SRCIN1Q9C0H9 1055 aa9.02□□□□□ -0.97
SCARNA18.2-201ENST00000516882 SEC31BQ9NQW1 1179 aa9.02□□□□□ -0.97
SCARNA18.2-201ENST00000516882 GGA1Q9UJY5 639 aa9.02□□□□□ -0.97
SCARNA18.2-201ENST00000516882 CLEC11AQ9Y240 323 aa9.02□□□□□ -0.97
SCARNA18.2-201ENST00000516882 CHMP3Q9Y3E7 222 aa9.02□□□□□ -0.97
SCARNA18.2-201ENST00000516882 SCN9AQ15858 1988 aa9.01□□□□□ -0.97
SCARNA18.2-201ENST00000516882 POTECB2RU33 542 aa9.01□□□□□ -0.97
SCARNA18.2-201ENST00000516882 RIMBP2O15034 1052 aa9.01□□□□□ -0.97
SCARNA18.2-201ENST00000516882 ALDH1L1O75891 902 aa9.01□□□□□ -0.97
SCARNA18.2-201ENST00000516882 UFL1O94874 794 aa9.01□□□□□ -0.97
SCARNA18.2-201ENST00000516882 EPHX2P34913 555 aa9.01□□□□□ -0.97
SCARNA18.2-201ENST00000516882 GPSM2P81274 684 aa9.01□□□□□ -0.97
SCARNA18.2-201ENST00000516882 ALDH1L2Q3SY69 923 aa9.01□□□□□ -0.97
SCARNA18.2-201ENST00000516882 BEND3Q5T5X7 828 aa9.01□□□□□ -0.97
SCARNA18.2-201ENST00000516882 CIAPIN1Q6FI81 312 aa9.01□□□□□ -0.97
SCARNA18.2-201ENST00000516882 CHADLQ6NUI6 762 aa9.01□□□□□ -0.97
SCARNA18.2-201ENST00000516882 LDHDQ86WU2 507 aa9.01□□□□□ -0.97
SCARNA18.2-201ENST00000516882 CDCA7LQ96GN5 454 aa9.01□□□□□ -0.97
SCARNA18.2-201ENST00000516882 BCL2L13Q9BXK5 485 aa9.01□□□□□ -0.97
SCARNA18.2-201ENST00000516882 TAF1DQ9H5J8 278 aaPredicted RBP9.01□□□□□ -0.97
SCARNA18.2-201ENST00000516882 GREM2Q9H772 168 aa9.01□□□□□ -0.97
SCARNA18.2-201ENST00000516882 SMC4Q9NTJ3 1288 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms