RNA–Protein interactions for RNA: ENST00000515627.2

LINC01843-201, Transcript of long intergenic non-protein coding RNA 1843, humanhuman

TSL 1 (best) BASIC

Gene LINC01843, Length 1,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01843-201ENST00000515627 CCDC184Q52MB2 194 aa13.25□□□□□ -0.29
LINC01843-201ENST00000515627 MAP1SQ66K74 1059 aaPredicted RBP13.25□□□□□ -0.29
LINC01843-201ENST00000515627 SP8Q8IXZ3 490 aa13.25□□□□□ -0.29
LINC01843-201ENST00000515627 LRRC37AA6NMS7 1700 aa13.25□□□□□ -0.29
LINC01843-201ENST00000515627 CNTNAP1P78357 1384 aa13.24□□□□□ -0.29
LINC01843-201ENST00000515627 BBOX1O75936 387 aa13.24□□□□□ -0.29
LINC01843-201ENST00000515627 GRAPQ13588 217 aa13.24□□□□□ -0.29
LINC01843-201ENST00000515627 PNMA8AQ86V59 439 aaPredicted RBP13.24□□□□□ -0.29
LINC01843-201ENST00000515627 NIM1KQ8IY84 436 aa13.24□□□□□ -0.29
LINC01843-201ENST00000515627 GRAPLQ8TC17 118 aaPredicted RBP13.24□□□□□ -0.29
LINC01843-201ENST00000515627 FAM89AQ96GI7 184 aa13.24□□□□□ -0.29
LINC01843-201ENST00000515627 IFT57Q9NWB7 429 aa13.24□□□□□ -0.29
LINC01843-201ENST00000515627 CLEC11AQ9Y240 323 aa13.24□□□□□ -0.29
LINC01843-201ENST00000515627 DDX46Q7L014 1031 aaKnown RBP13.23□□□□□ -0.29
LINC01843-201ENST00000515627 CNTROBQ8N137 903 aa13.23□□□□□ -0.29
LINC01843-201ENST00000515627 MPNDQ8N594 471 aa13.23□□□□□ -0.29
LINC01843-201ENST00000515627 C8orf58Q8NAV2 365 aa13.23□□□□□ -0.29
LINC01843-201ENST00000515627 VPS33BQ9H267 617 aa13.23□□□□□ -0.29
LINC01843-201ENST00000515627 PHAXQ9H814 394 aaKnown RBP13.23□□□□□ -0.29
LINC01843-201ENST00000515627 HYPKQ9NX55 129 aa13.23□□□□□ -0.29
LINC01843-201ENST00000515627 TMEM88BA6NKF7 163 aa13.22□□□□□ -0.29
LINC01843-201ENST00000515627 ELL2O00472 640 aaPredicted RBP13.22□□□□□ -0.29
LINC01843-201ENST00000515627 FMR1Q06787 632 aaKnown RBP eCLIP13.22□□□□□ -0.29
LINC01843-201ENST00000515627 CXCL9Q07325 125 aa13.22□□□□□ -0.29
LINC01843-201ENST00000515627 KIAA2012Q0VF49 1180 aa13.22□□□□□ -0.29
LINC01843-201ENST00000515627 SF3B3Q15393 1217 aaKnown RBP13.22□□□□□ -0.29
LINC01843-201ENST00000515627 DPP8Q6V1X1 898 aaPredicted RBP13.22□□□□□ -0.29
LINC01843-201ENST00000515627 CELF1Q92879 486 aaKnown RBP13.22□□□□□ -0.29
LINC01843-201ENST00000515627 ZNRF3Q9ULT6 936 aa13.22□□□□□ -0.29
LINC01843-201ENST00000515627 LMOD1P29536 600 aaPredicted RBP13.21□□□□□ -0.29
LINC01843-201ENST00000515627 GNAI1P63096 354 aa13.21□□□□□ -0.29
LINC01843-201ENST00000515627 TRIM28Q13263 835 aaKnown RBP13.21□□□□□ -0.29
LINC01843-201ENST00000515627 RTL5Q5HYW3 569 aaPredicted RBP13.21□□□□□ -0.29
LINC01843-201ENST00000515627 SUPT20HQ8NEM7 779 aa13.21□□□□□ -0.29
LINC01843-201ENST00000515627 TMX4Q9H1E5 349 aaPredicted RBP13.21□□□□□ -0.29
LINC01843-201ENST00000515627 YDJCA8MPS7 323 aa13.2□□□□□ -0.3
LINC01843-201ENST00000515627 VEGFBP49765 207 aa13.2□□□□□ -0.3
LINC01843-201ENST00000515627 TSPYL6Q8N831 410 aa13.2□□□□□ -0.3
LINC01843-201ENST00000515627 GPRC5DQ9NZD1 345 aa13.2□□□□□ -0.3
LINC01843-201ENST00000515627 IRS4O14654 1257 aaPredicted RBP13.19□□□□□ -0.3
LINC01843-201ENST00000515627 USP50Q70EL3 339 aaPredicted RBP13.19□□□□□ -0.3
LINC01843-201ENST00000515627 RIC3Q7Z5B4 369 aa13.19□□□□□ -0.3
LINC01843-201ENST00000515627 SHTN1A0MZ66 631 aa13.18□□□□□ -0.3
LINC01843-201ENST00000515627 RASSF10A6NK89 507 aa13.18□□□□□ -0.3
LINC01843-201ENST00000515627 TRAF5O00463 557 aa13.18□□□□□ -0.3
LINC01843-201ENST00000515627 RAD17O75943 681 aa13.18□□□□□ -0.3
LINC01843-201ENST00000515627 GMPSP49915 693 aaPredicted RBP13.18□□□□□ -0.3
LINC01843-201ENST00000515627 GPSM2P81274 684 aa13.18□□□□□ -0.3
LINC01843-201ENST00000515627 CALD1Q05682 793 aaKnown RBP13.18□□□□□ -0.3
LINC01843-201ENST00000515627 GOLGA2Q08379 1002 aa13.18□□□□□ -0.3
LINC01843-201ENST00000515627 TMC4Q7Z404 712 aa13.18□□□□□ -0.3
LINC01843-201ENST00000515627 ZBTB38Q8NAP3 1195 aaPredicted RBP13.18□□□□□ -0.3
LINC01843-201ENST00000515627 CIAPIN1Q6FI81 312 aa13.17□□□□□ -0.3
LINC01843-201ENST00000515627 JARID2Q92833 1246 aaPredicted RBP13.17□□□□□ -0.3
LINC01843-201ENST00000515627 TSR2Q969E8 191 aaKnown RBP13.17□□□□□ -0.3
LINC01843-201ENST00000515627 MYD88Q99836 296 aa13.17□□□□□ -0.3
LINC01843-201ENST00000515627 SEC31BQ9NQW1 1179 aa13.17□□□□□ -0.3
LINC01843-201ENST00000515627 ADARB2Q9NS39 739 aaKnown RBP13.17□□□□□ -0.3
LINC01843-201ENST00000515627 POLLQ9UGP5 575 aa13.17□□□□□ -0.3
LINC01843-201ENST00000515627 NSFL1CQ9UNZ2 370 aaKnown RBP13.17□□□□□ -0.3
LINC01843-201ENST00000515627 FOXN1O15353 648 aa13.16□□□□□ -0.3
LINC01843-201ENST00000515627 HIRAP54198 1017 aaPredicted RBP13.16□□□□□ -0.3
LINC01843-201ENST00000515627 CST9Q5W186 159 aa13.16□□□□□ -0.3
LINC01843-201ENST00000515627 TNS4Q8IZW8 715 aa13.16□□□□□ -0.3
LINC01843-201ENST00000515627 GPR101Q96P66 508 aaPredicted RBP13.16□□□□□ -0.3
LINC01843-201ENST00000515627 METTL22Q9BUU2 404 aaPredicted RBP13.16□□□□□ -0.3
LINC01843-201ENST00000515627 CDHR2Q9BYE9 1310 aa13.15□□□□□ -0.3
LINC01843-201ENST00000515627 TRPM7Q96QT4 1865 aa13.15□□□□□ -0.3
LINC01843-201ENST00000515627 PCCAP05165 728 aaPredicted RBP13.15□□□□□ -0.3
LINC01843-201ENST00000515627 RPS8P62241 208 aaKnown RBP13.15□□□□□ -0.3
LINC01843-201ENST00000515627 CCDC27Q2M243 656 aa13.15□□□□□ -0.3
LINC01843-201ENST00000515627 WASHC4Q2M389 1173 aa13.15□□□□□ -0.3
LINC01843-201ENST00000515627 DEFB115Q30KQ5 88 aa13.15□□□□□ -0.3
LINC01843-201ENST00000515627 CCDC30Q5VVM6 783 aa13.15□□□□□ -0.3
LINC01843-201ENST00000515627 WWC1Q8IX03 1113 aa13.15□□□□□ -0.3
LINC01843-201ENST00000515627 CCDC191Q8NCU4 936 aa13.15□□□□□ -0.3
LINC01843-201ENST00000515627 TRPM4Q8TD43 1214 aa13.15□□□□□ -0.3
LINC01843-201ENST00000515627 DBNDD1Q9H9R9 158 aa13.15□□□□□ -0.3
LINC01843-201ENST00000515627 PGAP2Q9UHJ9 254 aa13.15□□□□□ -0.3
LINC01843-201ENST00000515627 THSD7BQ9C0I4 1608 aa13.14□□□□□ -0.31
LINC01843-201ENST00000515627 RIMBP2O15034 1052 aa13.14□□□□□ -0.31
LINC01843-201ENST00000515627 IGKV5-2P06315 115 aa13.14□□□□□ -0.31
LINC01843-201ENST00000515627 C1QBPQ07021 282 aaKnown RBP13.14□□□□□ -0.31
LINC01843-201ENST00000515627 TNIP1Q15025 636 aa13.14□□□□□ -0.31
LINC01843-201ENST00000515627 TBC1D16Q8TBP0 767 aa13.14□□□□□ -0.31
LINC01843-201ENST00000515627 KCNQ5Q9NR82 932 aa13.14□□□□□ -0.31
LINC01843-201ENST00000515627 WBP1LQ9NX94 342 aa13.14□□□□□ -0.31
LINC01843-201ENST00000515627 ABT1Q9ULW3 272 aaKnown RBP13.14□□□□□ -0.31
LINC01843-201ENST00000515627 MAP3K2Q9Y2U5 619 aa13.14□□□□□ -0.31
LINC01843-201ENST00000515627 ZBTB12Q9Y330 459 aaPredicted RBP13.14□□□□□ -0.31
LINC01843-201ENST00000515627 RTL9Q8NET4 1388 aa13.14□□□□□ -0.31
LINC01843-201ENST00000515627 SCN9AQ15858 1988 aa13.14□□□□□ -0.31
LINC01843-201ENST00000515627 WDR33Q9C0J8 1336 aaKnown RBP13.13□□□□□ -0.31
LINC01843-201ENST00000515627 C6orf229H3BNL8 230 aa13.13□□□□□ -0.31
LINC01843-201ENST00000515627 PSMD14O00487 310 aa13.13□□□□□ -0.31
LINC01843-201ENST00000515627 KSR2Q6VAB6 950 aa13.13□□□□□ -0.31
LINC01843-201ENST00000515627 G2E3Q7L622 706 aa13.13□□□□□ -0.31
LINC01843-201ENST00000515627 CCDC85AQ96PX6 553 aaPredicted RBP13.13□□□□□ -0.31
LINC01843-201ENST00000515627 BCL2L13Q9BXK5 485 aa13.13□□□□□ -0.31
LINC01843-201ENST00000515627 GLIS2Q9BZE0 524 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms