RNA–Protein interactions for RNA: ENST00000514013.1

SH3D19-209, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-209ENST00000514013 IARSP41252 1262 aaKnown RBP12.36□□□□□ -0.43
SH3D19-209ENST00000514013 KCNQ3O43525 872 aa12.35□□□□□ -0.43
SH3D19-209ENST00000514013 NPR1P16066 1061 aa12.35□□□□□ -0.43
SH3D19-209ENST00000514013 SCNN1DP51172 638 aa12.35□□□□□ -0.43
SH3D19-209ENST00000514013 TTC5Q8N0Z6 440 aa12.35□□□□□ -0.43
SH3D19-209ENST00000514013 GPC2Q8N158 579 aa12.35□□□□□ -0.43
SH3D19-209ENST00000514013 SYNE4Q8N205 404 aa12.35□□□□□ -0.43
SH3D19-209ENST00000514013 CFAP44Q96MT7 982 aa12.35□□□□□ -0.43
SH3D19-209ENST00000514013 NPHP1O15259 732 aa12.34□□□□□ -0.43
SH3D19-209ENST00000514013 EPS15P42566 896 aa12.34□□□□□ -0.43
SH3D19-209ENST00000514013 LSM11P83369 360 aaKnown RBP eCLIP12.34□□□□□ -0.43
SH3D19-209ENST00000514013 ZNF790Q6PG37 636 aa12.34□□□□□ -0.43
SH3D19-209ENST00000514013 NBPF5PQ86XG9 351 aaPredicted RBP12.34□□□□□ -0.43
SH3D19-209ENST00000514013 DZIP3Q86Y13 1208 aaKnown RBP12.34□□□□□ -0.43
SH3D19-209ENST00000514013 IL17REQ8NFR9 667 aa12.34□□□□□ -0.43
SH3D19-209ENST00000514013 TLL2Q9Y6L7 1015 aa12.34□□□□□ -0.43
SH3D19-209ENST00000514013 PRAMEF22A3QJZ6 481 aa12.33□□□□□ -0.44
SH3D19-209ENST00000514013 ECE1P42892 770 aa12.33□□□□□ -0.44
SH3D19-209ENST00000514013 FBXO22Q8NEZ5 403 aa12.33□□□□□ -0.44
SH3D19-209ENST00000514013 BEGAINQ9BUH8 593 aa12.33□□□□□ -0.44
SH3D19-209ENST00000514013 GJA3Q9Y6H8 435 aa12.33□□□□□ -0.44
SH3D19-209ENST00000514013 BCORQ6W2J9 1755 aa12.33□□□□□ -0.44
SH3D19-209ENST00000514013 RTKN2Q8IZC4 609 aa12.32□□□□□ -0.44
SH3D19-209ENST00000514013 ZIC5Q96T25 663 aa12.32□□□□□ -0.44
SH3D19-209ENST00000514013 USP16Q9Y5T5 823 aa12.31□□□□□ -0.44
SH3D19-209ENST00000514013 ABCC12Q96J65 1359 aa12.3□□□□□ -0.44
SH3D19-209ENST00000514013 FAM177BA6PVY3 158 aa12.3□□□□□ -0.44
SH3D19-209ENST00000514013 MAP2K2P36507 400 aa12.3□□□□□ -0.44
SH3D19-209ENST00000514013 DGKZQ13574 1117 aa12.3□□□□□ -0.44
SH3D19-209ENST00000514013 SAPCD2Q86UD0 394 aa12.3□□□□□ -0.44
SH3D19-209ENST00000514013 PSMD1Q99460 953 aa12.3□□□□□ -0.44
SH3D19-209ENST00000514013 TEX13AQ9BXU3 409 aaPredicted RBP12.3□□□□□ -0.44
SH3D19-209ENST00000514013 NBPF26B4DH59 902 aa12.29□□□□□ -0.44
SH3D19-209ENST00000514013 SOX10P56693 466 aa12.29□□□□□ -0.44
SH3D19-209ENST00000514013 AMER1Q5JTC6 1135 aaPredicted RBP12.29□□□□□ -0.44
SH3D19-209ENST00000514013 CIAPIN1Q6FI81 312 aa12.29□□□□□ -0.44
SH3D19-209ENST00000514013 NBPF10Q6P3W6 841 aaKnown RBP12.29□□□□□ -0.44
SH3D19-209ENST00000514013 NBPF15Q8N660 670 aa12.29□□□□□ -0.44
SH3D19-209ENST00000514013 JDP2Q8WYK2 163 aa12.29□□□□□ -0.44
SH3D19-209ENST00000514013 FMNL2Q96PY5 1086 aa12.29□□□□□ -0.44
SH3D19-209ENST00000514013 TAOK2Q9UL54 1235 aa12.29□□□□□ -0.44
SH3D19-209ENST00000514013 LMOD1P29536 600 aaPredicted RBP12.28□□□□□ -0.44
SH3D19-209ENST00000514013 EIF6P56537 245 aaKnown RBP12.28□□□□□ -0.44
SH3D19-209ENST00000514013 TEFQ10587 303 aa12.28□□□□□ -0.44
SH3D19-209ENST00000514013 CLEC4GQ6UXB4 293 aa12.28□□□□□ -0.44
SH3D19-209ENST00000514013 GLIS2Q9BZE0 524 aaPredicted RBP12.28□□□□□ -0.44
SH3D19-209ENST00000514013 NIP7Q9Y221 180 aaKnown RBP eCLIP12.28□□□□□ -0.44
SH3D19-209ENST00000514013 CASP8AP2Q9UKL3 1982 aa12.28□□□□□ -0.44
SH3D19-209ENST00000514013 SIPA1L3O60292 1781 aaPredicted RBP12.28□□□□□ -0.44
SH3D19-209ENST00000514013 CELF2O95319 508 aaKnown RBP12.27□□□□□ -0.45
SH3D19-209ENST00000514013 BRPF1P55201 1214 aaPredicted RBP12.27□□□□□ -0.45
SH3D19-209ENST00000514013 HLFQ16534 295 aa12.27□□□□□ -0.45
SH3D19-209ENST00000514013 CRY2Q49AN0 593 aa12.27□□□□□ -0.45
SH3D19-209ENST00000514013 DLK2Q6UY11 383 aa12.27□□□□□ -0.45
SH3D19-209ENST00000514013 TPTE2Q6XPS3 522 aa12.27□□□□□ -0.45
SH3D19-209ENST00000514013 USP50Q70EL3 339 aaPredicted RBP12.27□□□□□ -0.45
SH3D19-209ENST00000514013 CEMIPQ8WUJ3 1361 aa12.27□□□□□ -0.45
SH3D19-209ENST00000514013 COL3A1P02461 1466 aaPredicted RBP12.27□□□□□ -0.45
SH3D19-209ENST00000514013 GNAT3A8MTJ3 354 aa12.26□□□□□ -0.45
SH3D19-209ENST00000514013 CA12O43570 354 aa12.26□□□□□ -0.45
SH3D19-209ENST00000514013 NUDT7P0C024 238 aa12.26□□□□□ -0.45
SH3D19-209ENST00000514013 PBX2P40425 430 aa12.26□□□□□ -0.45
SH3D19-209ENST00000514013 NUTM1Q86Y26 1132 aa12.26□□□□□ -0.45
SH3D19-209ENST00000514013 STK24Q9Y6E0 443 aa12.26□□□□□ -0.45
SH3D19-209ENST00000514013 C2orf72A6NCS6 295 aa12.25□□□□□ -0.45
SH3D19-209ENST00000514013 DIAPH1O60610 1272 aaKnown RBP12.25□□□□□ -0.45
SH3D19-209ENST00000514013 HSPA5P11021 654 aaKnown RBP12.25□□□□□ -0.45
SH3D19-209ENST00000514013 ALDH1B1P30837 517 aa12.25□□□□□ -0.45
SH3D19-209ENST00000514013 NPM2Q86SE8 214 aaKnown RBP12.25□□□□□ -0.45
SH3D19-209ENST00000514013 LARGE2Q8N3Y3 721 aa12.25□□□□□ -0.45
SH3D19-209ENST00000514013 MFRPQ9BY79 579 aa12.25□□□□□ -0.45
SH3D19-209ENST00000514013 GPRC5DQ9NZD1 345 aa12.25□□□□□ -0.45
SH3D19-209ENST00000514013 BTBD11A6QL63 1104 aa12.24□□□□□ -0.45
SH3D19-209ENST00000514013 HIRAP54198 1017 aaPredicted RBP12.24□□□□□ -0.45
SH3D19-209ENST00000514013 HHIPL1Q96JK4 782 aa12.24□□□□□ -0.45
SH3D19-209ENST00000514013 TRPM7Q96QT4 1865 aa12.24□□□□□ -0.45
SH3D19-209ENST00000514013 ZNF408Q9H9D4 720 aa12.24□□□□□ -0.45
SH3D19-209ENST00000514013 ADARB2Q9NS39 739 aaKnown RBP12.24□□□□□ -0.45
SH3D19-209ENST00000514013 ZNF652Q9Y2D9 606 aa12.24□□□□□ -0.45
SH3D19-209ENST00000514013 KNSTRNQ9Y448 316 aa12.24□□□□□ -0.45
SH3D19-209ENST00000514013 NPC1L1Q9UHC9 1359 aa12.23□□□□□ -0.45
SH3D19-209ENST00000514013 SHTN1A0MZ66 631 aa12.23□□□□□ -0.45
SH3D19-209ENST00000514013 TCERG1O14776 1098 aaKnown RBP12.23□□□□□ -0.45
SH3D19-209ENST00000514013 CXCL9Q07325 125 aa12.23□□□□□ -0.45
SH3D19-209ENST00000514013 TRPM4Q8TD43 1214 aa12.23□□□□□ -0.45
SH3D19-209ENST00000514013 PHACTR3Q96KR7 559 aa12.23□□□□□ -0.45
SH3D19-209ENST00000514013 PGAP2Q9UHJ9 254 aa12.23□□□□□ -0.45
SH3D19-209ENST00000514013 RIC1Q4ADV7 1423 aa12.22□□□□□ -0.45
SH3D19-209ENST00000514013 HOXA10P31260 410 aaPredicted RBP12.22□□□□□ -0.45
SH3D19-209ENST00000514013 GMPSP49915 693 aaPredicted RBP12.22□□□□□ -0.45
SH3D19-209ENST00000514013 AOC3Q16853 763 aa12.22□□□□□ -0.45
SH3D19-209ENST00000514013 PRPF38BQ5VTL8 546 aaKnown RBP12.22□□□□□ -0.45
SH3D19-209ENST00000514013 CC2D2BQ6DHV5 1058 aa12.22□□□□□ -0.45
SH3D19-209ENST00000514013 NIM1KQ8IY84 436 aa12.22□□□□□ -0.45
SH3D19-209ENST00000514013 GAS2L2Q8NHY3 880 aa12.22□□□□□ -0.45
SH3D19-209ENST00000514013 UBN2Q6ZU65 1347 aa12.21□□□□□ -0.45
SH3D19-209ENST00000514013 FAM155AB1AL88 458 aaPredicted RBP12.21□□□□□ -0.45
SH3D19-209ENST00000514013 RGL2O15211 777 aa12.21□□□□□ -0.45
SH3D19-209ENST00000514013 PPIP5K2O43314 1243 aa12.21□□□□□ -0.45
SH3D19-209ENST00000514013 LHX6Q9UPM6 363 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms