RNA–Protein interactions for RNA: ENST00000513794.1

TRIM23-207, Transcript of tripartite motif containing 23, humanhuman

TSL 4

Gene TRIM23, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-207ENST00000513794 LMNB1P20700 586 aa14.9□□□□□ -0.02
TRIM23-207ENST00000513794 CWF19L2Q2TBE0 894 aaKnown RBP14.9□□□□□ -0.02
TRIM23-207ENST00000513794 CCDC93Q567U6 631 aa14.9□□□□□ -0.02
TRIM23-207ENST00000513794 SPDYE1Q8NFV5 336 aaPredicted RBP14.9□□□□□ -0.02
TRIM23-207ENST00000513794 DNAAF4Q8WXU2 420 aa14.9□□□□□ -0.02
TRIM23-207ENST00000513794 GPBP1L1Q9HC44 474 aaPredicted RBP14.9□□□□□ -0.02
TRIM23-207ENST00000513794 ANKRD31Q8N7Z5 1873 aa14.89□□□□□ -0.03
TRIM23-207ENST00000513794 PCCAP05165 728 aaPredicted RBP14.89□□□□□ -0.03
TRIM23-207ENST00000513794 IGKV5-2P06315 115 aa14.89□□□□□ -0.03
TRIM23-207ENST00000513794 RTKN2Q8IZC4 609 aa14.89□□□□□ -0.03
TRIM23-207ENST00000513794 TAOK3Q9H2K8 898 aa14.89□□□□□ -0.03
TRIM23-207ENST00000513794 ADCY9O60503 1353 aa14.88□□□□□ -0.03
TRIM23-207ENST00000513794 PPEF1O14829 653 aaPredicted RBP14.88□□□□□ -0.03
TRIM23-207ENST00000513794 BBOX1O75936 387 aa14.88□□□□□ -0.03
TRIM23-207ENST00000513794 HSP90B1P14625 803 aaKnown RBP14.88□□□□□ -0.03
TRIM23-207ENST00000513794 PRELPP51888 382 aa14.88□□□□□ -0.03
TRIM23-207ENST00000513794 SLC4A10Q6U841 1118 aa14.88□□□□□ -0.03
TRIM23-207ENST00000513794 TRMT2AQ8IZ69 625 aaKnown RBP14.88□□□□□ -0.03
TRIM23-207ENST00000513794 CCDC85AQ96PX6 553 aaPredicted RBP14.88□□□□□ -0.03
TRIM23-207ENST00000513794 NEURL1BA8MQ27 555 aa14.87□□□□□ -0.03
TRIM23-207ENST00000513794 PDE8AO60658 829 aa14.87□□□□□ -0.03
TRIM23-207ENST00000513794 GSE1Q14687 1217 aa14.87□□□□□ -0.03
TRIM23-207ENST00000513794 SF3B3Q15393 1217 aaKnown RBP14.87□□□□□ -0.03
TRIM23-207ENST00000513794 CC2D2BQ6DHV5 1058 aa14.87□□□□□ -0.03
TRIM23-207ENST00000513794 REM2Q8IYK8 340 aaPredicted RBP14.87□□□□□ -0.03
TRIM23-207ENST00000513794 MRPL50Q8N5N7 158 aaKnown RBP14.87□□□□□ -0.03
TRIM23-207ENST00000513794 SSH1Q8WYL5 1049 aa14.87□□□□□ -0.03
TRIM23-207ENST00000513794 BCL2L13Q9BXK5 485 aa14.87□□□□□ -0.03
TRIM23-207ENST00000513794 FKBP4Q02790 459 aaKnown RBP eCLIP14.86□□□□□ -0.03
TRIM23-207ENST00000513794 GCKRQ14397 625 aa14.86□□□□□ -0.03
TRIM23-207ENST00000513794 LINS1Q8NG48 757 aa14.86□□□□□ -0.03
TRIM23-207ENST00000513794 ZNF277Q9NRM2 450 aaPredicted RBP14.86□□□□□ -0.03
TRIM23-207ENST00000513794 SLX4Q8IY92 1834 aa14.86□□□□□ -0.03
TRIM23-207ENST00000513794 ABCC4O15439 1325 aa14.86□□□□□ -0.03
TRIM23-207ENST00000513794 H7C1W4 665 aa14.85□□□□□ -0.03
TRIM23-207ENST00000513794 GRAPQ13588 217 aa14.85□□□□□ -0.03
TRIM23-207ENST00000513794 UBE3BQ7Z3V4 1068 aa14.85□□□□□ -0.03
TRIM23-207ENST00000513794 GRAPLQ8TC17 118 aaPredicted RBP14.85□□□□□ -0.03
TRIM23-207ENST00000513794 ATP6V0A2Q9Y487 856 aa14.85□□□□□ -0.03
TRIM23-207ENST00000513794 RPS8P62241 208 aaKnown RBP14.84□□□□□ -0.03
TRIM23-207ENST00000513794 DPY19L2Q6NUT2 758 aa14.84□□□□□ -0.03
TRIM23-207ENST00000513794 SLC51AQ86UW1 340 aa14.84□□□□□ -0.03
TRIM23-207ENST00000513794 SP8Q8IXZ3 490 aa14.84□□□□□ -0.03
TRIM23-207ENST00000513794 HS6ST3Q8IZP7 471 aa14.84□□□□□ -0.03
TRIM23-207ENST00000513794 CELF1Q92879 486 aaKnown RBP14.84□□□□□ -0.03
TRIM23-207ENST00000513794 SEC31BQ9NQW1 1179 aa14.84□□□□□ -0.03
TRIM23-207ENST00000513794 SMC4Q9NTJ3 1288 aa14.84□□□□□ -0.03
TRIM23-207ENST00000513794 BRCA1P38398 1863 aaKnown RBP14.84□□□□□ -0.03
TRIM23-207ENST00000513794 RIC1Q4ADV7 1423 aa14.83□□□□□ -0.03
TRIM23-207ENST00000513794 CCDC152Q4G0S7 254 aa14.83□□□□□ -0.04
TRIM23-207ENST00000513794 GRIPAP1Q4V328 841 aa14.83□□□□□ -0.04
TRIM23-207ENST00000513794 BEND3Q5T5X7 828 aa14.83□□□□□ -0.04
TRIM23-207ENST00000513794 MPNDQ8N594 471 aa14.83□□□□□ -0.04
TRIM23-207ENST00000513794 RRAGCQ9HB90 399 aa14.83□□□□□ -0.04
TRIM23-207ENST00000513794 LTBP3Q9NS15 1303 aa14.83□□□□□ -0.04
TRIM23-207ENST00000513794 ARFGEF1Q9Y6D6 1849 aa14.82□□□□□ -0.04
TRIM23-207ENST00000513794 NUBP1P53384 320 aa14.82□□□□□ -0.04
TRIM23-207ENST00000513794 ALDH1L2Q3SY69 923 aa14.82□□□□□ -0.04
TRIM23-207ENST00000513794 DPP8Q6V1X1 898 aaPredicted RBP14.82□□□□□ -0.04
TRIM23-207ENST00000513794 NMRK2Q9NPI5 230 aa14.82□□□□□ -0.04
TRIM23-207ENST00000513794 C9orf78Q9NZ63 289 aaPredicted RBP14.82□□□□□ -0.04
TRIM23-207ENST00000513794 KDM2BQ8NHM5 1336 aa14.82□□□□□ -0.04
TRIM23-207ENST00000513794 COL11A2P13942 1736 aaPredicted RBP14.81□□□□□ -0.04
TRIM23-207ENST00000513794 IARSP41252 1262 aaKnown RBP14.81□□□□□ -0.04
TRIM23-207ENST00000513794 TTLL11Q8NHH1 800 aa14.81□□□□□ -0.04
TRIM23-207ENST00000513794 JDP2Q8WYK2 163 aa14.81□□□□□ -0.04
TRIM23-207ENST00000513794 PSMD1Q99460 953 aa14.81□□□□□ -0.04
TRIM23-207ENST00000513794 SRCIN1Q9C0H9 1055 aa14.81□□□□□ -0.04
TRIM23-207ENST00000513794 NSFL1CQ9UNZ2 370 aaKnown RBP14.81□□□□□ -0.04
TRIM23-207ENST00000513794 CLEC11AQ9Y240 323 aa14.81□□□□□ -0.04
TRIM23-207ENST00000513794 CDHR2Q9BYE9 1310 aa14.81□□□□□ -0.04
TRIM23-207ENST00000513794 GLTPD2A6NH11 291 aa14.8□□□□□ -0.04
TRIM23-207ENST00000513794 CT47B1P0C2W7 299 aaPredicted RBP14.8□□□□□ -0.04
TRIM23-207ENST00000513794 CTSWP56202 376 aa14.8□□□□□ -0.04
TRIM23-207ENST00000513794 TMC4Q7Z404 712 aa14.8□□□□□ -0.04
TRIM23-207ENST00000513794 ANKRD18AQ8IVF6 992 aa14.8□□□□□ -0.04
TRIM23-207ENST00000513794 LARGE2Q8N3Y3 721 aa14.8□□□□□ -0.04
TRIM23-207ENST00000513794 NOB1Q9ULX3 412 aaKnown RBP14.8□□□□□ -0.04
TRIM23-207ENST00000513794 TNRC6CQ9HCJ0 1690 aaKnown RBP14.8□□□□□ -0.04
TRIM23-207ENST00000513794 C6orf229H3BNL8 230 aa14.79□□□□□ -0.04
TRIM23-207ENST00000513794 ALDH1L1O75891 902 aa14.79□□□□□ -0.04
TRIM23-207ENST00000513794 DDNO94850 711 aaPredicted RBP14.79□□□□□ -0.04
TRIM23-207ENST00000513794 C16orf71Q8IYS4 520 aaPredicted RBP14.79□□□□□ -0.04
TRIM23-207ENST00000513794 SUPT20HQ8NEM7 779 aa14.79□□□□□ -0.04
TRIM23-207ENST00000513794 RNF25Q96BH1 459 aaPredicted RBP14.79□□□□□ -0.04
TRIM23-207ENST00000513794 DLEC1Q9Y238 1755 aa14.79□□□□□ -0.04
TRIM23-207ENST00000513794 CHMP3Q9Y3E7 222 aa14.79□□□□□ -0.04
TRIM23-207ENST00000513794 ANKRD36CQ5JPF3 1778 aa14.78□□□□□ -0.04
TRIM23-207ENST00000513794 ARFGEF2Q9Y6D5 1785 aa14.78□□□□□ -0.04
TRIM23-207ENST00000513794 PTPRCP08575 1304 aa14.78□□□□□ -0.04
TRIM23-207ENST00000513794 GRM8O00222 908 aa14.78□□□□□ -0.04
TRIM23-207ENST00000513794 PPIP5K2O43314 1243 aa14.78□□□□□ -0.04
TRIM23-207ENST00000513794 RARSP54136 660 aaKnown RBP14.78□□□□□ -0.04
TRIM23-207ENST00000513794 GPSM2P81274 684 aa14.78□□□□□ -0.04
TRIM23-207ENST00000513794 AOC3Q16853 763 aa14.78□□□□□ -0.04
TRIM23-207ENST00000513794 CDC5LQ99459 802 aaKnown RBP14.78□□□□□ -0.04
TRIM23-207ENST00000513794 GREM2Q9H772 168 aa14.78□□□□□ -0.04
TRIM23-207ENST00000513794 KIF3CO14782 793 aa14.77□□□□□ -0.05
TRIM23-207ENST00000513794 RIMBP2O15034 1052 aa14.77□□□□□ -0.05
TRIM23-207ENST00000513794 CASP7P55210 303 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms