RNA–Protein interactions for RNA: ENST00000513009.5

SDHC-208, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-208ENST00000513009 SETDB2Q96T68 719 aa11.07□□□□□ -0.64
SDHC-208ENST00000513009 MKRN1Q9UHC7 482 aaKnown RBP11.07□□□□□ -0.64
SDHC-208ENST00000513009 TBC1D2BQ9UPU7 963 aa11.07□□□□□ -0.64
SDHC-208ENST00000513009 ADAMTSL1Q8N6G6 1762 aa11.06□□□□□ -0.64
SDHC-208ENST00000513009 CAMTA2O94983 1202 aa11.06□□□□□ -0.64
SDHC-208ENST00000513009 ST5P78524 1137 aa11.06□□□□□ -0.64
SDHC-208ENST00000513009 TEFQ10587 303 aa11.06□□□□□ -0.64
SDHC-208ENST00000513009 DMRTA1Q5VZB9 504 aa11.06□□□□□ -0.64
SDHC-208ENST00000513009 CCDC24Q8N4L8 307 aa11.06□□□□□ -0.64
SDHC-208ENST00000513009 IL17REQ8NFR9 667 aa11.06□□□□□ -0.64
SDHC-208ENST00000513009 MASTLQ96GX5 879 aa11.06□□□□□ -0.64
SDHC-208ENST00000513009 COL3A1P02461 1466 aaPredicted RBP11.06□□□□□ -0.64
SDHC-208ENST00000513009 GNAT3A8MTJ3 354 aa11.05□□□□□ -0.64
SDHC-208ENST00000513009 FOXN1O15353 648 aa11.05□□□□□ -0.64
SDHC-208ENST00000513009 NPM2Q86SE8 214 aaKnown RBP11.05□□□□□ -0.64
SDHC-208ENST00000513009 ZNF454Q8N9F8 522 aa11.05□□□□□ -0.64
SDHC-208ENST00000513009 GAS2L2Q8NHY3 880 aa11.05□□□□□ -0.64
SDHC-208ENST00000513009 C7orf43Q8WVR3 580 aa11.05□□□□□ -0.64
SDHC-208ENST00000513009 FMNL2Q96PY5 1086 aa11.05□□□□□ -0.64
SDHC-208ENST00000513009 TAF1DQ9H5J8 278 aaPredicted RBP11.05□□□□□ -0.64
SDHC-208ENST00000513009 NUDCQ9Y266 331 aa11.05□□□□□ -0.64
SDHC-208ENST00000513009 ZNF330Q9Y3S2 320 aaPredicted RBP11.05□□□□□ -0.64
SDHC-208ENST00000513009 CEMIPQ8WUJ3 1361 aa11.04□□□□□ -0.64
SDHC-208ENST00000513009 NPHP1O15259 732 aa11.04□□□□□ -0.64
SDHC-208ENST00000513009 PER1O15534 1290 aaPredicted RBP11.04□□□□□ -0.64
SDHC-208ENST00000513009 ITGBL1O95965 494 aaPredicted RBP11.04□□□□□ -0.64
SDHC-208ENST00000513009 A1BGP04217 495 aa11.04□□□□□ -0.64
SDHC-208ENST00000513009 CTCFP49711 727 aaPredicted RBP11.04□□□□□ -0.64
SDHC-208ENST00000513009 CCDC93Q567U6 631 aa11.04□□□□□ -0.64
SDHC-208ENST00000513009 CLEC4GQ6UXB4 293 aa11.04□□□□□ -0.64
SDHC-208ENST00000513009 NPC1L1Q9UHC9 1359 aa11.03□□□□□ -0.64
SDHC-208ENST00000513009 KLRG2A4D1S0 409 aaPredicted RBP11.03□□□□□ -0.64
SDHC-208ENST00000513009 TMEM88BA6NKF7 163 aa11.03□□□□□ -0.64
SDHC-208ENST00000513009 NEFMP07197 916 aa11.03□□□□□ -0.64
SDHC-208ENST00000513009 DZIP3Q86Y13 1208 aaKnown RBP11.03□□□□□ -0.64
SDHC-208ENST00000513009 AIDAQ96BJ3 306 aa11.03□□□□□ -0.64
SDHC-208ENST00000513009 NPR1P16066 1061 aa11.02□□□□□ -0.65
SDHC-208ENST00000513009 VEGFBP49765 207 aa11.02□□□□□ -0.65
SDHC-208ENST00000513009 FKBP4Q02790 459 aaKnown RBP eCLIP11.02□□□□□ -0.65
SDHC-208ENST00000513009 RNF166Q96A37 237 aaPredicted RBP11.02□□□□□ -0.65
SDHC-208ENST00000513009 WBP1LQ9NX94 342 aa11.02□□□□□ -0.65
SDHC-208ENST00000513009 RASSF10A6NK89 507 aa11.01□□□□□ -0.65
SDHC-208ENST00000513009 U2SURPO15042 1029 aaKnown RBP11.01□□□□□ -0.65
SDHC-208ENST00000513009 ADGRD1Q6QNK2 874 aa11.01□□□□□ -0.65
SDHC-208ENST00000513009 PNMA8AQ86V59 439 aaPredicted RBP11.01□□□□□ -0.65
SDHC-208ENST00000513009 NBPF5PQ86XG9 351 aaPredicted RBP11.01□□□□□ -0.65
SDHC-208ENST00000513009 HACL1Q9UJ83 578 aa11.01□□□□□ -0.65
SDHC-208ENST00000513009 ZNF652Q9Y2D9 606 aa11.01□□□□□ -0.65
SDHC-208ENST00000513009 ZNF541Q9H0D2 1346 aa11.01□□□□□ -0.65
SDHC-208ENST00000513009 THSD7BQ9C0I4 1608 aa11□□□□□ -0.65
SDHC-208ENST00000513009 BTBD11A6QL63 1104 aa11□□□□□ -0.65
SDHC-208ENST00000513009 TK2O00142 265 aa11□□□□□ -0.65
SDHC-208ENST00000513009 FZD9O00144 591 aa11□□□□□ -0.65
SDHC-208ENST00000513009 DPYSL4O14531 572 aa11□□□□□ -0.65
SDHC-208ENST00000513009 KCNQ3O43525 872 aa11□□□□□ -0.65
SDHC-208ENST00000513009 EPHX2P34913 555 aa11□□□□□ -0.65
SDHC-208ENST00000513009 RTKN2Q8IZC4 609 aa11□□□□□ -0.65
SDHC-208ENST00000513009 USP16Q9Y5T5 823 aa11□□□□□ -0.65
SDHC-208ENST00000513009 HRO43593 1189 aa10.99□□□□□ -0.65
SDHC-208ENST00000513009 DDX10Q13206 875 aaKnown RBP10.99□□□□□ -0.65
SDHC-208ENST00000513009 EAPPQ56P03 285 aaPredicted RBP10.99□□□□□ -0.65
SDHC-208ENST00000513009 TPTE2Q6XPS3 522 aa10.99□□□□□ -0.65
SDHC-208ENST00000513009 KCNK17Q96T54 332 aa10.99□□□□□ -0.65
SDHC-208ENST00000513009 PNNQ9H307 717 aaKnown RBP10.99□□□□□ -0.65
SDHC-208ENST00000513009 ZNF277Q9NRM2 450 aaPredicted RBP10.99□□□□□ -0.65
SDHC-208ENST00000513009 PCDHGA10Q9Y5H3 936 aa10.99□□□□□ -0.65
SDHC-208ENST00000513009 SNED1Q8TER0 1413 aa10.99□□□□□ -0.65
SDHC-208ENST00000513009 SNRPA1P09661 255 aaKnown RBP10.98□□□□□ -0.65
SDHC-208ENST00000513009 ALDH1B1P30837 517 aa10.98□□□□□ -0.65
SDHC-208ENST00000513009 IARSP41252 1262 aaKnown RBP10.98□□□□□ -0.65
SDHC-208ENST00000513009 LBX1P52954 281 aa10.98□□□□□ -0.65
SDHC-208ENST00000513009 DEFB115Q30KQ5 88 aa10.98□□□□□ -0.65
SDHC-208ENST00000513009 CNTROBQ8N137 903 aa10.98□□□□□ -0.65
SDHC-208ENST00000513009 GPC2Q8N158 579 aa10.98□□□□□ -0.65
SDHC-208ENST00000513009 ZDHHC16Q969W1 377 aa10.98□□□□□ -0.65
SDHC-208ENST00000513009 ADAM33Q9BZ11 813 aa10.98□□□□□ -0.65
SDHC-208ENST00000513009 RNF123Q5XPI4 1314 aa10.98□□□□□ -0.65
SDHC-208ENST00000513009 LAMB4A4D0S4 1761 aa10.98□□□□□ -0.65
SDHC-208ENST00000513009 HSPA8P11142 646 aaKnown RBP10.97□□□□□ -0.65
SDHC-208ENST00000513009 PIP4K2AP48426 406 aaPredicted RBP10.97□□□□□ -0.65
SDHC-208ENST00000513009 MAP2K1Q02750 393 aaPredicted RBP10.97□□□□□ -0.65
SDHC-208ENST00000513009 RALBP1Q15311 655 aa10.97□□□□□ -0.65
SDHC-208ENST00000513009 SYNE4Q8N205 404 aa10.97□□□□□ -0.65
SDHC-208ENST00000513009 PHACTR3Q96KR7 559 aa10.97□□□□□ -0.65
SDHC-208ENST00000513009 PSMD1Q99460 953 aa10.97□□□□□ -0.65
SDHC-208ENST00000513009 NIP7Q9Y221 180 aaKnown RBP eCLIP10.97□□□□□ -0.65
SDHC-208ENST00000513009 TRPM7Q96QT4 1865 aa10.97□□□□□ -0.65
SDHC-208ENST00000513009 LTBP1Q14766 1721 aa10.96□□□□□ -0.65
SDHC-208ENST00000513009 WDR33Q9C0J8 1336 aaKnown RBP10.96□□□□□ -0.65
SDHC-208ENST00000513009 PRAMEF22A3QJZ6 481 aa10.96□□□□□ -0.65
SDHC-208ENST00000513009 NBPF26B4DH59 902 aa10.96□□□□□ -0.65
SDHC-208ENST00000513009 PRKAR2BP31323 418 aa10.96□□□□□ -0.65
SDHC-208ENST00000513009 CRY2Q49AN0 593 aa10.96□□□□□ -0.65
SDHC-208ENST00000513009 MAP1SQ66K74 1059 aaPredicted RBP10.96□□□□□ -0.65
SDHC-208ENST00000513009 CC2D2BQ6DHV5 1058 aa10.96□□□□□ -0.65
SDHC-208ENST00000513009 NBPF10Q6P3W6 841 aaKnown RBP10.96□□□□□ -0.65
SDHC-208ENST00000513009 OLFM4Q6UX06 510 aa10.96□□□□□ -0.65
SDHC-208ENST00000513009 NBPF15Q8N660 670 aa10.96□□□□□ -0.65
SDHC-208ENST00000513009 ABHD8Q96I13 439 aa10.96□□□□□ -0.65
SDHC-208ENST00000513009 RSPH6AQ9H0K4 717 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms