RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 MAP1SQ66K74 1059 aaPredicted RBP19.08■□□□□ 0.64
CCHCR1-229ENST00000512418 CNTROBQ8N137 903 aa19.08■□□□□ 0.64
CCHCR1-229ENST00000512418 TMC4Q7Z404 712 aa19.07■□□□□ 0.64
CCHCR1-229ENST00000512418 MPNDQ8N594 471 aa19.07■□□□□ 0.64
CCHCR1-229ENST00000512418 LRRC37AA6NMS7 1700 aa19.06■□□□□ 0.64
CCHCR1-229ENST00000512418 ATP5J2-PTCD1G3V325 749 aa19.06■□□□□ 0.64
CCHCR1-229ENST00000512418 ZNF428Q96B54 188 aa19.06■□□□□ 0.64
CCHCR1-229ENST00000512418 FAM89AQ96GI7 184 aa19.06■□□□□ 0.64
CCHCR1-229ENST00000512418 ZNRF3Q9ULT6 936 aa19.06■□□□□ 0.64
CCHCR1-229ENST00000512418 EPS15P42566 896 aa19.05■□□□□ 0.64
CCHCR1-229ENST00000512418 GOLGA2Q08379 1002 aa19.05■□□□□ 0.64
CCHCR1-229ENST00000512418 KIAA2012Q0VF49 1180 aa19.05■□□□□ 0.64
CCHCR1-229ENST00000512418 TRIM28Q13263 835 aaKnown RBP19.05■□□□□ 0.64
CCHCR1-229ENST00000512418 USP50Q70EL3 339 aaPredicted RBP19.05■□□□□ 0.64
CCHCR1-229ENST00000512418 TAF1P21675 1872 aa19.05■□□□□ 0.64
CCHCR1-229ENST00000512418 SF3B3Q15393 1217 aaKnown RBP19.04■□□□□ 0.64
CCHCR1-229ENST00000512418 RIC3Q7Z5B4 369 aa19.04■□□□□ 0.64
CCHCR1-229ENST00000512418 DUOX1Q9NRD9 1551 aa19.03■□□□□ 0.64
CCHCR1-229ENST00000512418 CXCL9Q07325 125 aa19.03■□□□□ 0.64
CCHCR1-229ENST00000512418 GPRC5DQ9NZD1 345 aa19.03■□□□□ 0.64
CCHCR1-229ENST00000512418 ELL2O00472 640 aaPredicted RBP19.02■□□□□ 0.64
CCHCR1-229ENST00000512418 CHMP4AQ9BY43 222 aa19.02■□□□□ 0.64
CCHCR1-229ENST00000512418 PHAXQ9H814 394 aaKnown RBP19.02■□□□□ 0.64
CCHCR1-229ENST00000512418 ADARB2Q9NS39 739 aaKnown RBP19.02■□□□□ 0.64
CCHCR1-229ENST00000512418 CDHR2Q9BYE9 1310 aa19.01■□□□□ 0.63
CCHCR1-229ENST00000512418 IRS4O14654 1257 aaPredicted RBP19.01■□□□□ 0.63
CCHCR1-229ENST00000512418 RTL5Q5HYW3 569 aaPredicted RBP19.01■□□□□ 0.63
CCHCR1-229ENST00000512418 CIAPIN1Q6FI81 312 aa19.01■□□□□ 0.63
CCHCR1-229ENST00000512418 ZBTB38Q8NAP3 1195 aaPredicted RBP19.01■□□□□ 0.63
CCHCR1-229ENST00000512418 CELF1Q92879 486 aaKnown RBP19.01■□□□□ 0.63
CCHCR1-229ENST00000512418 RASSF10A6NK89 507 aa19■□□□□ 0.63
CCHCR1-229ENST00000512418 HSP90B1P14625 803 aaKnown RBP19■□□□□ 0.63
CCHCR1-229ENST00000512418 VEGFBP49765 207 aa19■□□□□ 0.63
CCHCR1-229ENST00000512418 GMPSP49915 693 aaPredicted RBP19■□□□□ 0.63
CCHCR1-229ENST00000512418 TNIP1Q15025 636 aa19■□□□□ 0.63
CCHCR1-229ENST00000512418 TNS4Q8IZW8 715 aa19■□□□□ 0.63
CCHCR1-229ENST00000512418 C8orf58Q8NAV2 365 aa19■□□□□ 0.63
CCHCR1-229ENST00000512418 CCDC30Q5VVM6 783 aa18.99■□□□□ 0.63
CCHCR1-229ENST00000512418 MYD88Q99836 296 aa18.99■□□□□ 0.63
CCHCR1-229ENST00000512418 NSFL1CQ9UNZ2 370 aaKnown RBP18.99■□□□□ 0.63
CCHCR1-229ENST00000512418 RAD17O75943 681 aa18.98■□□□□ 0.63
CCHCR1-229ENST00000512418 DDX58O95786 925 aaKnown RBP18.98■□□□□ 0.63
CCHCR1-229ENST00000512418 DEFB115Q30KQ5 88 aa18.98■□□□□ 0.63
CCHCR1-229ENST00000512418 CCDC191Q8NCU4 936 aa18.98■□□□□ 0.63
CCHCR1-229ENST00000512418 ABT1Q9ULW3 272 aaKnown RBP18.98■□□□□ 0.63
CCHCR1-229ENST00000512418 COL4A1P02462 1669 aa18.98■□□□□ 0.63
CCHCR1-229ENST00000512418 YDJCA8MPS7 323 aa18.97■□□□□ 0.63
CCHCR1-229ENST00000512418 WASHC4Q2M389 1173 aa18.97■□□□□ 0.63
CCHCR1-229ENST00000512418 BCL2L13Q9BXK5 485 aa18.97■□□□□ 0.63
CCHCR1-229ENST00000512418 PCCAP05165 728 aaPredicted RBP18.96■□□□□ 0.63
CCHCR1-229ENST00000512418 RPS8P62241 208 aaKnown RBP18.96■□□□□ 0.63
CCHCR1-229ENST00000512418 CCDC27Q2M243 656 aa18.96■□□□□ 0.63
CCHCR1-229ENST00000512418 CCDC184Q52MB2 194 aa18.96■□□□□ 0.63
CCHCR1-229ENST00000512418 CWC25Q9NXE8 425 aaPredicted RBP18.96■□□□□ 0.63
CCHCR1-229ENST00000512418 TRPM7Q96QT4 1865 aa18.96■□□□□ 0.63
CCHCR1-229ENST00000512418 C6orf229H3BNL8 230 aa18.95■□□□□ 0.62
CCHCR1-229ENST00000512418 FOXN1O15353 648 aa18.95■□□□□ 0.62
CCHCR1-229ENST00000512418 GPSM2P81274 684 aa18.95■□□□□ 0.62
CCHCR1-229ENST00000512418 TSPYL6Q8N831 410 aa18.95■□□□□ 0.62
CCHCR1-229ENST00000512418 TSR2Q969E8 191 aaKnown RBP18.95■□□□□ 0.62
CCHCR1-229ENST00000512418 AIDAQ96BJ3 306 aa18.95■□□□□ 0.62
CCHCR1-229ENST00000512418 EYA3Q99504 573 aa18.95■□□□□ 0.62
CCHCR1-229ENST00000512418 METTL22Q9BUU2 404 aaPredicted RBP18.95■□□□□ 0.62
CCHCR1-229ENST00000512418 POLLQ9UGP5 575 aa18.95■□□□□ 0.62
CCHCR1-229ENST00000512418 TRAF5O00463 557 aa18.94■□□□□ 0.62
CCHCR1-229ENST00000512418 FMR1Q06787 632 aaKnown RBP eCLIP18.94■□□□□ 0.626e-7■■□□□ 13.9
CCHCR1-229ENST00000512418 CCDC152Q4G0S7 254 aa18.94■□□□□ 0.62
CCHCR1-229ENST00000512418 ZC3H15Q8WU90 426 aaKnown RBP18.94■□□□□ 0.62
CCHCR1-229ENST00000512418 WDR33Q9C0J8 1336 aaKnown RBP18.94■□□□□ 0.62
CCHCR1-229ENST00000512418 PDE8AO60658 829 aa18.93■□□□□ 0.62
CCHCR1-229ENST00000512418 CST9Q5W186 159 aa18.93■□□□□ 0.62
CCHCR1-229ENST00000512418 WWC1Q8IX03 1113 aa18.93■□□□□ 0.62
CCHCR1-229ENST00000512418 STK31Q9BXU1 1019 aa18.93■□□□□ 0.62
CCHCR1-229ENST00000512418 DBNDD1Q9H9R9 158 aa18.93■□□□□ 0.62
CCHCR1-229ENST00000512418 PGAP2Q9UHJ9 254 aa18.93■□□□□ 0.62
CCHCR1-229ENST00000512418 CNOT7Q9UIV1 285 aaKnown RBP18.93■□□□□ 0.62
CCHCR1-229ENST00000512418 MAP3K2Q9Y2U5 619 aa18.93■□□□□ 0.62
CCHCR1-229ENST00000512418 H7C1D1 291 aa18.92■□□□□ 0.62
CCHCR1-229ENST00000512418 RIMBP2O15034 1052 aa18.92■□□□□ 0.62
CCHCR1-229ENST00000512418 KSR2Q6VAB6 950 aa18.92■□□□□ 0.62
CCHCR1-229ENST00000512418 MICALL2Q8IY33 904 aa18.92■□□□□ 0.62
CCHCR1-229ENST00000512418 TBC1D16Q8TBP0 767 aa18.92■□□□□ 0.62
CCHCR1-229ENST00000512418 DPF2Q92785 391 aa18.92■□□□□ 0.62
CCHCR1-229ENST00000512418 SEC31BQ9NQW1 1179 aa18.92■□□□□ 0.62
CCHCR1-229ENST00000512418 WBP1LQ9NX94 342 aa18.92■□□□□ 0.62
CCHCR1-229ENST00000512418 PODXL2Q9NZ53 605 aa18.92■□□□□ 0.62
CCHCR1-229ENST00000512418 THSD7BQ9C0I4 1608 aa18.92■□□□□ 0.62
CCHCR1-229ENST00000512418 PI4KAP2A4QPH2 592 aa18.91■□□□□ 0.62
CCHCR1-229ENST00000512418 PSMD14O00487 310 aa18.91■□□□□ 0.62
CCHCR1-229ENST00000512418 ECE2O60344 883 aa18.91■□□□□ 0.62
CCHCR1-229ENST00000512418 ECE1P42892 770 aa18.91■□□□□ 0.62
CCHCR1-229ENST00000512418 CTCFP49711 727 aaPredicted RBP18.91■□□□□ 0.62
CCHCR1-229ENST00000512418 HIRAP54198 1017 aaPredicted RBP18.91■□□□□ 0.62
CCHCR1-229ENST00000512418 NCBP3Q53F19 620 aaKnown RBP18.91■□□□□ 0.62
CCHCR1-229ENST00000512418 PI4KAP1Q8N8J0 262 aa18.91■□□□□ 0.62
CCHCR1-229ENST00000512418 TRPM4Q8TD43 1214 aa18.91■□□□□ 0.62
CCHCR1-229ENST00000512418 PRDM10Q9NQV6 1147 aa18.91■□□□□ 0.62
CCHCR1-229ENST00000512418 ZBTB12Q9Y330 459 aaPredicted RBP18.91■□□□□ 0.62
CCHCR1-229ENST00000512418 TLL2Q9Y6L7 1015 aa18.91■□□□□ 0.62
CCHCR1-229ENST00000512418 IL16Q14005 1332 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms