RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 APOBRQ0VD83 1088 aa8.5□□□□□ -1.05
CPNE4-208ENST00000511604 C1QTNF12Q5T7M4 302 aa8.5□□□□□ -1.05
CPNE4-208ENST00000511604 ANKRD23Q86SG2 305 aa8.5□□□□□ -1.05
CPNE4-208ENST00000511604 ADGRF5Q8IZF2 1346 aa8.5□□□□□ -1.05
CPNE4-208ENST00000511604 GPR161Q8N6U8 529 aaKnown RBP8.5□□□□□ -1.05
CPNE4-208ENST00000511604 SPATS2LQ9NUQ6 558 aaKnown RBP8.5□□□□□ -1.05
CPNE4-208ENST00000511604 CPSF2Q9P2I0 782 aaKnown RBP8.5□□□□□ -1.05
CPNE4-208ENST00000511604 MED14O60244 1454 aa8.49□□□□□ -1.05
CPNE4-208ENST00000511604 ANKRD18BA2A2Z9 1011 aa8.49□□□□□ -1.05
CPNE4-208ENST00000511604 EXOC5O00471 708 aa8.49□□□□□ -1.05
CPNE4-208ENST00000511604 ECM2O94769 699 aaPredicted RBP8.49□□□□□ -1.05
CPNE4-208ENST00000511604 SYT1P21579 422 aa8.49□□□□□ -1.05
CPNE4-208ENST00000511604 E4F1Q66K89 784 aaPredicted RBP8.49□□□□□ -1.05
CPNE4-208ENST00000511604 DDX11Q96FC9 970 aa8.49□□□□□ -1.05
CPNE4-208ENST00000511604 PPP1R13BQ96KQ4 1090 aa8.49□□□□□ -1.05
CPNE4-208ENST00000511604 PDE11AQ9HCR9 933 aa8.49□□□□□ -1.05
CPNE4-208ENST00000511604 SOS1Q07889 1333 aaPredicted RBP8.49□□□□□ -1.05
CPNE4-208ENST00000511604 RTN2O75298 545 aa8.49□□□□□ -1.05
CPNE4-208ENST00000511604 ZSCAN22P10073 491 aaPredicted RBP8.49□□□□□ -1.05
CPNE4-208ENST00000511604 GNAI1P63096 354 aa8.49□□□□□ -1.05
CPNE4-208ENST00000511604 TRAF1Q13077 416 aa8.49□□□□□ -1.05
CPNE4-208ENST00000511604 LONRF2Q1L5Z9 754 aa8.49□□□□□ -1.05
CPNE4-208ENST00000511604 WWC2Q6AWC2 1192 aa8.49□□□□□ -1.05
CPNE4-208ENST00000511604 UNC5CLQ8IV45 518 aa8.49□□□□□ -1.05
CPNE4-208ENST00000511604 ARMC2Q8NEN0 867 aa8.49□□□□□ -1.05
CPNE4-208ENST00000511604 MRFAP1L1Q96HT8 127 aa8.49□□□□□ -1.05
CPNE4-208ENST00000511604 CARD6Q9BX69 1037 aa8.49□□□□□ -1.05
CPNE4-208ENST00000511604 SENP3Q9H4L4 574 aaPredicted RBP8.49□□□□□ -1.05
CPNE4-208ENST00000511604 FAN1Q9Y2M0 1017 aa8.49□□□□□ -1.05
CPNE4-208ENST00000511604 SPATA31D1Q6ZQQ2 1576 aa8.49□□□□□ -1.05
CPNE4-208ENST00000511604 KNDC1Q76NI1 1749 aa8.48□□□□□ -1.05
CPNE4-208ENST00000511604 KINO60870 393 aaKnown RBP8.48□□□□□ -1.05
CPNE4-208ENST00000511604 IFIT2P09913 472 aaKnown RBP8.48□□□□□ -1.05
CPNE4-208ENST00000511604 MRPL12P52815 198 aaKnown RBP8.48□□□□□ -1.05
CPNE4-208ENST00000511604 COL9A3Q14050 684 aaPredicted RBP8.48□□□□□ -1.05
CPNE4-208ENST00000511604 DDX54Q8TDD1 881 aaKnown RBP8.48□□□□□ -1.05
CPNE4-208ENST00000511604 CABS1Q96KC9 395 aa8.48□□□□□ -1.05
CPNE4-208ENST00000511604 NUP62CLQ9H1M0 184 aa8.48□□□□□ -1.05
CPNE4-208ENST00000511604 BICC1Q9H694 974 aaKnown RBP8.48□□□□□ -1.05
CPNE4-208ENST00000511604 ODF2LQ9ULJ1 636 aa8.48□□□□□ -1.05
CPNE4-208ENST00000511604 RAPGEF6Q8TEU7 1601 aa8.48□□□□□ -1.05
CPNE4-208ENST00000511604 MADDQ8WXG6 1647 aa8.48□□□□□ -1.05
CPNE4-208ENST00000511604 EIF2AK4Q9P2K8 1649 aaKnown RBP8.48□□□□□ -1.05
CPNE4-208ENST00000511604 RTL1A6NKG5 1358 aa8.48□□□□□ -1.05
CPNE4-208ENST00000511604 ABCC11Q96J66 1382 aa8.48□□□□□ -1.05
CPNE4-208ENST00000511604 PHLPP2Q6ZVD8 1323 aa8.48□□□□□ -1.05
CPNE4-208ENST00000511604 EME2A4GXA9 379 aaPredicted RBP8.48□□□□□ -1.05
CPNE4-208ENST00000511604 TMCO5BA8MYB1 307 aa8.48□□□□□ -1.05
CPNE4-208ENST00000511604 MAFGO15525 162 aa8.48□□□□□ -1.05
CPNE4-208ENST00000511604 RDXP35241 583 aaKnown RBP8.48□□□□□ -1.05
CPNE4-208ENST00000511604 ZNF165P49910 485 aa8.48□□□□□ -1.05
CPNE4-208ENST00000511604 ETF1P62495 437 aaKnown RBP8.48□□□□□ -1.05
CPNE4-208ENST00000511604 ICA1Q05084 483 aa8.48□□□□□ -1.05
CPNE4-208ENST00000511604 LRRFIP1Q32MZ4 808 aaKnown RBP8.48□□□□□ -1.05
CPNE4-208ENST00000511604 PREPLQ4J6C6 727 aaPredicted RBP8.48□□□□□ -1.05
CPNE4-208ENST00000511604 SARM1Q6SZW1 724 aa8.48□□□□□ -1.05
CPNE4-208ENST00000511604 KLHL23Q8NBE8 558 aa8.48□□□□□ -1.05
CPNE4-208ENST00000511604 CNNM3Q8NE01 707 aa8.48□□□□□ -1.05
CPNE4-208ENST00000511604 PIK3R5Q8WYR1 880 aa8.48□□□□□ -1.05
CPNE4-208ENST00000511604 ZKSCAN4Q969J2 545 aaPredicted RBP8.48□□□□□ -1.05
CPNE4-208ENST00000511604 BAG1Q99933 345 aaPredicted RBP8.48□□□□□ -1.05
CPNE4-208ENST00000511604 PARD6BQ9BYG5 372 aa8.48□□□□□ -1.05
CPNE4-208ENST00000511604 PTPRTO14522 1441 aa8.48□□□□□ -1.05
CPNE4-208ENST00000511604 TTC41PQ6P2S7 1318 aa8.47□□□□□ -1.05
CPNE4-208ENST00000511604 PSDA5PKW4 1024 aaPredicted RBP8.47□□□□□ -1.05
CPNE4-208ENST00000511604 AP1G2O75843 785 aa8.47□□□□□ -1.05
CPNE4-208ENST00000511604 ALDH1L2Q3SY69 923 aa8.47□□□□□ -1.05
CPNE4-208ENST00000511604 C8orf58Q8NAV2 365 aa8.47□□□□□ -1.05
CPNE4-208ENST00000511604 JPH4Q96JJ6 628 aa8.47□□□□□ -1.05
CPNE4-208ENST00000511604 CFAP53Q96M91 514 aa8.47□□□□□ -1.05
CPNE4-208ENST00000511604 PRAM1Q96QH2 718 aa8.47□□□□□ -1.05
CPNE4-208ENST00000511604 GGNBP2Q9H3C7 697 aa8.47□□□□□ -1.05
CPNE4-208ENST00000511604 ANO2Q9NQ90 1003 aa8.47□□□□□ -1.05
CPNE4-208ENST00000511604 ATP6V1DQ9Y5K8 247 aa8.47□□□□□ -1.05
CPNE4-208ENST00000511604 USP16Q9Y5T5 823 aa8.47□□□□□ -1.05
CPNE4-208ENST00000511604 SHANK2Q9UPX8 1470 aa8.47□□□□□ -1.05
CPNE4-208ENST00000511604 MAP3K4Q9Y6R4 1608 aa8.47□□□□□ -1.05
CPNE4-208ENST00000511604 ABCC4O15439 1325 aa8.47□□□□□ -1.05
CPNE4-208ENST00000511604 CCDC151A5D8V7 595 aa8.47□□□□□ -1.05
CPNE4-208ENST00000511604 CHUKO15111 745 aa8.47□□□□□ -1.05
CPNE4-208ENST00000511604 FANCGO15287 622 aa8.47□□□□□ -1.05
CPNE4-208ENST00000511604 F13A1P00488 732 aa8.47□□□□□ -1.05
CPNE4-208ENST00000511604 RPS6KA3P51812 740 aa8.47□□□□□ -1.05
CPNE4-208ENST00000511604 PSMD2Q13200 908 aa8.47□□□□□ -1.05
CPNE4-208ENST00000511604 MCM6Q14566 821 aa8.47□□□□□ -1.05
CPNE4-208ENST00000511604 NUTM1Q86Y26 1132 aa8.47□□□□□ -1.05
CPNE4-208ENST00000511604 ANKRD18AQ8IVF6 992 aa8.47□□□□□ -1.05
CPNE4-208ENST00000511604 PHACTR3Q96KR7 559 aa8.47□□□□□ -1.05
CPNE4-208ENST00000511604 DNAJC25Q9H1X3 360 aa8.47□□□□□ -1.05
CPNE4-208ENST00000511604 DNAI1Q9UI46 699 aa8.47□□□□□ -1.05
CPNE4-208ENST00000511604 PLEKHD1A6NEE1 506 aa8.46□□□□□ -1.05
CPNE4-208ENST00000511604 STX6O43752 255 aa8.46□□□□□ -1.05
CPNE4-208ENST00000511604 N4BP1O75113 896 aaKnown RBP8.46□□□□□ -1.05
CPNE4-208ENST00000511604 URI1O94763 535 aaPredicted RBP8.46□□□□□ -1.05
CPNE4-208ENST00000511604 GNL2Q13823 731 aaKnown RBP8.46□□□□□ -1.05
CPNE4-208ENST00000511604 RBBP5Q15291 538 aaKnown RBP8.46□□□□□ -1.05
CPNE4-208ENST00000511604 TTC6Q86TZ1 520 aa8.46□□□□□ -1.05
CPNE4-208ENST00000511604 FERMT3Q86UX7 667 aa8.46□□□□□ -1.05
CPNE4-208ENST00000511604 HOMER1Q86YM7 354 aa8.46□□□□□ -1.05
CPNE4-208ENST00000511604 MSL3Q8N5Y2 521 aaKnown RBP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms