RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 CHMP4AQ9BY43 222 aa15.53■□□□□ 0.08
CHFR-208ENST00000511001 ADAMTSL1Q8N6G6 1762 aa15.53■□□□□ 0.08
CHFR-208ENST00000511001 LTBP1Q14766 1721 aa15.53■□□□□ 0.08
CHFR-208ENST00000511001 DUOX1Q9NRD9 1551 aa15.53■□□□□ 0.08
CHFR-208ENST00000511001 IRS4O14654 1257 aaPredicted RBP15.52■□□□□ 0.08
CHFR-208ENST00000511001 POTEIP0CG38 1075 aa15.52■□□□□ 0.08
CHFR-208ENST00000511001 POTEJP0CG39 1038 aa15.52■□□□□ 0.08
CHFR-208ENST00000511001 G2E3Q7L622 706 aa15.52■□□□□ 0.08
CHFR-208ENST00000511001 FAM9BQ8IZU0 186 aa15.52■□□□□ 0.08
CHFR-208ENST00000511001 ZBTB38Q8NAP3 1195 aaPredicted RBP15.52■□□□□ 0.08
CHFR-208ENST00000511001 RTFDC1Q9BY42 306 aaPredicted RBP15.52■□□□□ 0.08
CHFR-208ENST00000511001 SPINK5Q9NQ38 1064 aaPredicted RBP15.52■□□□□ 0.08
CHFR-208ENST00000511001 LARGE2Q8N3Y3 721 aa15.51■□□□□ 0.07
CHFR-208ENST00000511001 CCDC191Q8NCU4 936 aa15.51■□□□□ 0.07
CHFR-208ENST00000511001 CELF1Q92879 486 aaKnown RBP15.51■□□□□ 0.07
CHFR-208ENST00000511001 TAF1DQ9H5J8 278 aaPredicted RBP15.51■□□□□ 0.07
CHFR-208ENST00000511001 MAP3K2Q9Y2U5 619 aa15.51■□□□□ 0.07
CHFR-208ENST00000511001 PI4KAP2A4QPH2 592 aa15.5■□□□□ 0.07
CHFR-208ENST00000511001 DDX58O95786 925 aaKnown RBP15.5■□□□□ 0.07
CHFR-208ENST00000511001 PCCAP05165 728 aaPredicted RBP15.5■□□□□ 0.07
CHFR-208ENST00000511001 IGKV5-2P06315 115 aa15.5■□□□□ 0.07
CHFR-208ENST00000511001 KSR2Q6VAB6 950 aa15.5■□□□□ 0.07
CHFR-208ENST00000511001 PI4KAP1Q8N8J0 262 aa15.5■□□□□ 0.07
CHFR-208ENST00000511001 JDP2Q8WYK2 163 aa15.5■□□□□ 0.07
CHFR-208ENST00000511001 JARID2Q92833 1246 aaPredicted RBP15.5■□□□□ 0.07
CHFR-208ENST00000511001 IQCA1LA6NCM1 817 aa15.49■□□□□ 0.07
CHFR-208ENST00000511001 PPIP5K2O43314 1243 aa15.49■□□□□ 0.07
CHFR-208ENST00000511001 VAMP4O75379 141 aa15.49■□□□□ 0.07
CHFR-208ENST00000511001 AOC3Q16853 763 aa15.49■□□□□ 0.07
CHFR-208ENST00000511001 GPC2Q8N158 579 aa15.49■□□□□ 0.07
CHFR-208ENST00000511001 MPNDQ8N594 471 aa15.49■□□□□ 0.07
CHFR-208ENST00000511001 STK31Q9BXU1 1019 aa15.49■□□□□ 0.07
CHFR-208ENST00000511001 VPS33BQ9H267 617 aa15.49■□□□□ 0.07
CHFR-208ENST00000511001 CWC25Q9NXE8 425 aaPredicted RBP15.49■□□□□ 0.07
CHFR-208ENST00000511001 SPEF2Q9C093 1822 aa15.48■□□□□ 0.07
CHFR-208ENST00000511001 SLC4A2P04920 1241 aa15.48■□□□□ 0.07
CHFR-208ENST00000511001 EIF6P56537 245 aaKnown RBP15.48■□□□□ 0.07
CHFR-208ENST00000511001 EXOSC9Q06265 439 aaKnown RBP15.48■□□□□ 0.07
CHFR-208ENST00000511001 CHADLQ6NUI6 762 aa15.48■□□□□ 0.07
CHFR-208ENST00000511001 DPP8Q6V1X1 898 aaPredicted RBP15.48■□□□□ 0.07
CHFR-208ENST00000511001 TMC4Q7Z404 712 aa15.48■□□□□ 0.07
CHFR-208ENST00000511001 NIM1KQ8IY84 436 aa15.48■□□□□ 0.07
CHFR-208ENST00000511001 TMX4Q9H1E5 349 aaPredicted RBP15.48■□□□□ 0.07
CHFR-208ENST00000511001 ZNF521Q96K83 1311 aa15.47■□□□□ 0.07
CHFR-208ENST00000511001 HSPA1AP0DMV8 641 aaKnown RBP15.47■□□□□ 0.07
CHFR-208ENST00000511001 HSPA1BP0DMV9 641 aaKnown RBP15.47■□□□□ 0.07
CHFR-208ENST00000511001 SUPT20HQ8NEM7 779 aa15.47■□□□□ 0.07
CHFR-208ENST00000511001 HACL1Q9UJ83 578 aa15.47■□□□□ 0.07
CHFR-208ENST00000511001 CDHR2Q9BYE9 1310 aa15.46■□□□□ 0.07
CHFR-208ENST00000511001 PDE8AO60658 829 aa15.46■□□□□ 0.07
CHFR-208ENST00000511001 EPHX2P34913 555 aa15.46■□□□□ 0.07
CHFR-208ENST00000511001 KIAA2012Q0VF49 1180 aa15.46■□□□□ 0.07
CHFR-208ENST00000511001 FLIIQ13045 1269 aa15.46■□□□□ 0.07
CHFR-208ENST00000511001 LDHDQ86WU2 507 aa15.46■□□□□ 0.07
CHFR-208ENST00000511001 SEC31BQ9NQW1 1179 aa15.46■□□□□ 0.07
CHFR-208ENST00000511001 GJA3Q9Y6H8 435 aa15.46■□□□□ 0.07
CHFR-208ENST00000511001 NEURL1BA8MQ27 555 aa15.45■□□□□ 0.06
CHFR-208ENST00000511001 SCNN1DP51172 638 aa15.45■□□□□ 0.06
CHFR-208ENST00000511001 RPS8P62241 208 aaKnown RBP15.45■□□□□ 0.06
CHFR-208ENST00000511001 CWF19L2Q2TBE0 894 aaKnown RBP15.45■□□□□ 0.06
CHFR-208ENST00000511001 SCN9AQ15858 1988 aa15.45■□□□□ 0.06
CHFR-208ENST00000511001 GPSM2P81274 684 aa15.44■□□□□ 0.06
CHFR-208ENST00000511001 CXCL9Q07325 125 aa15.44■□□□□ 0.06
CHFR-208ENST00000511001 ZNRF3Q9ULT6 936 aa15.44■□□□□ 0.06
CHFR-208ENST00000511001 YDJCA8MPS7 323 aa15.43■□□□□ 0.06
CHFR-208ENST00000511001 H7C1W4 665 aa15.43■□□□□ 0.06
CHFR-208ENST00000511001 HSP90B1P14625 803 aaKnown RBP15.43■□□□□ 0.06
CHFR-208ENST00000511001 NEXNQ0ZGT2 675 aa15.43■□□□□ 0.06
CHFR-208ENST00000511001 CCDC152Q4G0S7 254 aa15.43■□□□□ 0.06
CHFR-208ENST00000511001 EAPPQ56P03 285 aaPredicted RBP15.43■□□□□ 0.06
CHFR-208ENST00000511001 CCDC85AQ96PX6 553 aaPredicted RBP15.43■□□□□ 0.06
CHFR-208ENST00000511001 POLLQ9UGP5 575 aa15.43■□□□□ 0.06
CHFR-208ENST00000511001 NSFL1CQ9UNZ2 370 aaKnown RBP15.43■□□□□ 0.06
CHFR-208ENST00000511001 PSME4Q14997 1843 aa15.43■□□□□ 0.06
CHFR-208ENST00000511001 PASKQ96RG2 1323 aa15.43■□□□□ 0.06
CHFR-208ENST00000511001 ITGBL1O95965 494 aaPredicted RBP15.42■□□□□ 0.06
CHFR-208ENST00000511001 EPS15P42566 896 aa15.42■□□□□ 0.06
CHFR-208ENST00000511001 CASP7P55210 303 aa15.42■□□□□ 0.06
CHFR-208ENST00000511001 CTSWP56202 376 aa15.42■□□□□ 0.06
CHFR-208ENST00000511001 FKBP5Q13451 457 aaPredicted RBP15.42■□□□□ 0.06
CHFR-208ENST00000511001 DNAAF4Q8WXU2 420 aa15.42■□□□□ 0.06
CHFR-208ENST00000511001 MYH16Q9H6N6 1097 aa15.42■□□□□ 0.06
CHFR-208ENST00000511001 TRPM7Q96QT4 1865 aa15.42■□□□□ 0.06
CHFR-208ENST00000511001 GCKRQ14397 625 aa15.41■□□□□ 0.06
CHFR-208ENST00000511001 CIAPIN1Q6FI81 312 aa15.41■□□□□ 0.06
CHFR-208ENST00000511001 PNMA8AQ86V59 439 aaPredicted RBP15.41■□□□□ 0.06
CHFR-208ENST00000511001 TTLL11Q8NHH1 800 aa15.41■□□□□ 0.06
CHFR-208ENST00000511001 GPR101Q96P66 508 aaPredicted RBP15.41■□□□□ 0.06
CHFR-208ENST00000511001 POLR2AP24928 1970 aaKnown RBP15.4■□□□□ 0.06
CHFR-208ENST00000511001 C6orf229H3BNL8 230 aa15.4■□□□□ 0.06
CHFR-208ENST00000511001 RAD17O75943 681 aa15.4■□□□□ 0.06
CHFR-208ENST00000511001 LMOD1P29536 600 aaPredicted RBP15.4■□□□□ 0.06
CHFR-208ENST00000511001 WASHC4Q2M389 1173 aa15.4■□□□□ 0.06
CHFR-208ENST00000511001 MAP1SQ66K74 1059 aaPredicted RBP15.4■□□□□ 0.06
CHFR-208ENST00000511001 UBE3BQ7Z3V4 1068 aa15.4■□□□□ 0.06
CHFR-208ENST00000511001 TBC1D16Q8TBP0 767 aa15.4■□□□□ 0.06
CHFR-208ENST00000511001 PODXL2Q9NZ53 605 aa15.4■□□□□ 0.06
CHFR-208ENST00000511001 CLEC11AQ9Y240 323 aa15.4■□□□□ 0.06
CHFR-208ENST00000511001 RTL9Q8NET4 1388 aa15.39■□□□□ 0.05
CHFR-208ENST00000511001 F6X3S4 739 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms