RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 ATP5J2-PTCD1G3V325 749 aa12.14□□□□□ -0.47
NEK1-206ENST00000510533 PDE1AP54750 535 aa12.14□□□□□ -0.47
NEK1-206ENST00000510533 MRPS27Q92552 414 aaKnown RBP12.14□□□□□ -0.47
NEK1-206ENST00000510533 MAP3K1Q13233 1512 aa12.14□□□□□ -0.47
NEK1-206ENST00000510533 FSD2A1L4K1 749 aa12.13□□□□□ -0.47
NEK1-206ENST00000510533 BMP15O95972 392 aa12.13□□□□□ -0.47
NEK1-206ENST00000510533 RRAGBQ5VZM2 374 aa12.13□□□□□ -0.47
NEK1-206ENST00000510533 EXOC1Q9NV70 894 aa12.13□□□□□ -0.47
NEK1-206ENST00000510533 CTAGE15A4D2H0 777 aa12.13□□□□□ -0.47
NEK1-206ENST00000510533 PRC1O43663 620 aa12.13□□□□□ -0.47
NEK1-206ENST00000510533 LDHCP07864 332 aa12.13□□□□□ -0.47
NEK1-206ENST00000510533 CTAGE8P0CG41 777 aa12.13□□□□□ -0.47
NEK1-206ENST00000510533 CTAGE6Q86UF2 777 aa12.13□□□□□ -0.47
NEK1-206ENST00000510533 CTAGE4Q8IX94 777 aa12.13□□□□□ -0.47
NEK1-206ENST00000510533 DNAI1Q9UI46 699 aa12.13□□□□□ -0.47
NEK1-206ENST00000510533 CYLC1P35663 651 aaPredicted RBP12.13□□□□□ -0.47
NEK1-206ENST00000510533 MEIS3Q99687 375 aa12.13□□□□□ -0.47
NEK1-206ENST00000510533 VAT1LQ9HCJ6 419 aa12.13□□□□□ -0.47
NEK1-206ENST00000510533 ARFGAP3Q9NP61 516 aa12.13□□□□□ -0.47
NEK1-206ENST00000510533 NBPF7P0C2Y1 421 aaPredicted RBP12.13□□□□□ -0.47
NEK1-206ENST00000510533 F13A1P00488 732 aa12.12□□□□□ -0.47
NEK1-206ENST00000510533 UQCRFS1P1P0C7P4 283 aa12.12□□□□□ -0.47
NEK1-206ENST00000510533 DDX46Q7L014 1031 aaKnown RBP12.12□□□□□ -0.47
NEK1-206ENST00000510533 CDC5LQ99459 802 aaKnown RBP12.12□□□□□ -0.47
NEK1-206ENST00000510533 TEX13AQ9BXU3 409 aaPredicted RBP12.12□□□□□ -0.47
NEK1-206ENST00000510533 ZKSCAN5Q9Y2L8 839 aa12.12□□□□□ -0.47
NEK1-206ENST00000510533 RBM8AQ9Y5S9 174 aaKnown RBP12.12□□□□□ -0.47
NEK1-206ENST00000510533 TTC21AQ8NDW8 1320 aa12.12□□□□□ -0.47
NEK1-206ENST00000510533 RALGAPBQ86X10 1494 aa12.12□□□□□ -0.47
NEK1-206ENST00000510533 SPAG1Q07617 926 aa12.12□□□□□ -0.47
NEK1-206ENST00000510533 WTAPQ15007 396 aa12.12□□□□□ -0.47
NEK1-206ENST00000510533 ANKRD44Q8N8A2 993 aa12.12□□□□□ -0.47
NEK1-206ENST00000510533 BBXQ8WY36 941 aaPredicted RBP12.12□□□□□ -0.47
NEK1-206ENST00000510533 ALG1Q9BT22 464 aa12.12□□□□□ -0.47
NEK1-206ENST00000510533 DACT1Q9NYF0 836 aa12.12□□□□□ -0.47
NEK1-206ENST00000510533 ZBTB43O43298 467 aa12.12□□□□□ -0.47
NEK1-206ENST00000510533 BAG3O95817 575 aa12.12□□□□□ -0.47
NEK1-206ENST00000510533 TIGD1Q96MW7 591 aa12.12□□□□□ -0.47
NEK1-206ENST00000510533 TUBB4AP04350 444 aa12.12□□□□□ -0.47
NEK1-206ENST00000510533 IFNL2Q8IZJ0 200 aa12.12□□□□□ -0.47
NEK1-206ENST00000510533 RPGRQ92834 1020 aaKnown RBP12.12□□□□□ -0.47
NEK1-206ENST00000510533 AMOTL2Q9Y2J4 779 aa12.12□□□□□ -0.47
NEK1-206ENST00000510533 DCAF8L1A6NGE4 600 aa12.11□□□□□ -0.47
NEK1-206ENST00000510533 ZFYP08048 801 aaPredicted RBP12.11□□□□□ -0.47
NEK1-206ENST00000510533 KIAA0753Q2KHM9 967 aa12.11□□□□□ -0.47
NEK1-206ENST00000510533 SYCP3Q8IZU3 236 aa12.11□□□□□ -0.47
NEK1-206ENST00000510533 KRT23Q9C075 422 aa12.11□□□□□ -0.47
NEK1-206ENST00000510533 NOS1P29475 1434 aa12.11□□□□□ -0.47
NEK1-206ENST00000510533 CCDC172P0C7W6 258 aa12.11□□□□□ -0.47
NEK1-206ENST00000510533 AFMP43652 599 aa12.11□□□□□ -0.47
NEK1-206ENST00000510533 AOPEPQ8N6M6 819 aa12.11□□□□□ -0.47
NEK1-206ENST00000510533 CCDC97Q96F63 343 aaPredicted RBP12.11□□□□□ -0.47
NEK1-206ENST00000510533 DNAJC25Q9H1X3 360 aa12.11□□□□□ -0.47
NEK1-206ENST00000510533 C14orf93Q9H972 538 aaKnown RBP12.11□□□□□ -0.47
NEK1-206ENST00000510533 IQGAP2Q13576 1575 aa12.11□□□□□ -0.47
NEK1-206ENST00000510533 FERMT2Q96AC1 680 aa12.11□□□□□ -0.47
NEK1-206ENST00000510533 TCEANC2Q96MN5 208 aa12.11□□□□□ -0.47
NEK1-206ENST00000510533 LRRC2Q9BYS8 371 aa12.11□□□□□ -0.47
NEK1-206ENST00000510533 FOXO3O43524 673 aa12.1□□□□□ -0.47
NEK1-206ENST00000510533 C8orf34Q49A92 452 aa12.1□□□□□ -0.47
NEK1-206ENST00000510533 SRRTQ9BXP5 876 aaKnown RBP12.1□□□□□ -0.47
NEK1-206ENST00000510533 RNF216Q9NWF9 866 aaPredicted RBP12.1□□□□□ -0.47
NEK1-206ENST00000510533 DNM1Q05193 864 aaKnown RBP12.1□□□□□ -0.47
NEK1-206ENST00000510533 TMTC2Q8N394 836 aa12.1□□□□□ -0.47
NEK1-206ENST00000510533 DNMBPQ6XZF7 1577 aa12.1□□□□□ -0.47
NEK1-206ENST00000510533 KIF14Q15058 1648 aa12.1□□□□□ -0.47
NEK1-206ENST00000510533 SNRPA1P09661 255 aaKnown RBP12.1□□□□□ -0.47
NEK1-206ENST00000510533 Q6ZUG5 572 aa12.1□□□□□ -0.47
NEK1-206ENST00000510533 CCDC155Q8N6L0 562 aa12.1□□□□□ -0.47
NEK1-206ENST00000510533 CEP63Q96MT8 703 aa12.1□□□□□ -0.47
NEK1-206ENST00000510533 HOMER2Q9NSB8 354 aa12.1□□□□□ -0.47
NEK1-206ENST00000510533 TBCAO75347 108 aaKnown RBP12.1□□□□□ -0.47
NEK1-206ENST00000510533 SYT1P21579 422 aa12.1□□□□□ -0.47
NEK1-206ENST00000510533 STAT6P42226 847 aa12.1□□□□□ -0.47
NEK1-206ENST00000510533 ANKRD13DQ6ZTN6 518 aa12.1□□□□□ -0.47
NEK1-206ENST00000510533 SPAG5Q96R06 1193 aa12.1□□□□□ -0.47
NEK1-206ENST00000510533 SLU7O95391 586 aaKnown RBP12.1□□□□□ -0.47
NEK1-206ENST00000510533 IVLP07476 585 aa12.1□□□□□ -0.47
NEK1-206ENST00000510533 MCMDC2Q4G0Z9 681 aa12.1□□□□□ -0.47
NEK1-206ENST00000510533 ATP8B2P98198 1209 aa12.09□□□□□ -0.47
NEK1-206ENST00000510533 IDI1Q13907 227 aa12.09□□□□□ -0.47
NEK1-206ENST00000510533 IPO4Q8TEX9 1081 aaKnown RBP12.09□□□□□ -0.47
NEK1-206ENST00000510533 CRNKL1Q9BZJ0 848 aaKnown RBP12.09□□□□□ -0.47
NEK1-206ENST00000510533 ANXA1P04083 346 aa12.09□□□□□ -0.47
NEK1-206ENST00000510533 PRIM1P49642 420 aaKnown RBP12.09□□□□□ -0.47
NEK1-206ENST00000510533 HSP90AA4PQ58FG1 418 aa12.09□□□□□ -0.47
NEK1-206ENST00000510533 MRPL50Q8N5N7 158 aaKnown RBP12.09□□□□□ -0.47
NEK1-206ENST00000510533 CNNM2Q9H8M5 875 aa12.09□□□□□ -0.47
NEK1-206ENST00000510533 RTN1Q16799 776 aa12.09□□□□□ -0.47
NEK1-206ENST00000510533 C6orf163Q5TEZ5 329 aa12.09□□□□□ -0.47
NEK1-206ENST00000510533 DDX12PQ92771 950 aa12.09□□□□□ -0.47
NEK1-206ENST00000510533 JARID2Q92833 1246 aaPredicted RBP12.09□□□□□ -0.47
NEK1-206ENST00000510533 TTC12Q9H892 705 aaPredicted RBP12.09□□□□□ -0.47
NEK1-206ENST00000510533 MCM6Q14566 821 aa12.09□□□□□ -0.47
NEK1-206ENST00000510533 PLVAPQ9BX97 442 aa12.09□□□□□ -0.47
NEK1-206ENST00000510533 MNAT1P51948 309 aa12.08□□□□□ -0.48
NEK1-206ENST00000510533 RAB3GAP1Q15042 981 aa12.08□□□□□ -0.48
NEK1-206ENST00000510533 TBC1D5Q92609 795 aa12.08□□□□□ -0.48
NEK1-206ENST00000510533 ADGRL1O94910 1474 aa12.08□□□□□ -0.48
NEK1-206ENST00000510533 HSPA4P34932 840 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms