RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 PAXIP1Q6ZW49 1069 aaPredicted RBP13.09□□□□□ -0.31
SCARB2-204ENST00000509994 SP8Q8IXZ3 490 aa13.09□□□□□ -0.31
SCARB2-204ENST00000509994 CNTROBQ8N137 903 aa13.09□□□□□ -0.31
SCARB2-204ENST00000509994 BCL2L13Q9BXK5 485 aa13.09□□□□□ -0.31
SCARB2-204ENST00000509994 ABT1Q9ULW3 272 aaKnown RBP13.09□□□□□ -0.31
SCARB2-204ENST00000509994 ADAMTSL1Q8N6G6 1762 aa13.09□□□□□ -0.31
SCARB2-204ENST00000509994 IRS4O14654 1257 aaPredicted RBP13.08□□□□□ -0.32
SCARB2-204ENST00000509994 DDX58O95786 925 aaKnown RBP13.08□□□□□ -0.32
SCARB2-204ENST00000509994 EPS15P42566 896 aa13.08□□□□□ -0.32
SCARB2-204ENST00000509994 TMC4Q7Z404 712 aa13.08□□□□□ -0.32
SCARB2-204ENST00000509994 MYD88Q99836 296 aa13.08□□□□□ -0.32
SCARB2-204ENST00000509994 ZNRF3Q9ULT6 936 aa13.08□□□□□ -0.32
SCARB2-204ENST00000509994 TRPM7Q96QT4 1865 aa13.08□□□□□ -0.32
SCARB2-204ENST00000509994 LTBP1Q14766 1721 aa13.08□□□□□ -0.32
SCARB2-204ENST00000509994 C6orf229H3BNL8 230 aa13.07□□□□□ -0.32
SCARB2-204ENST00000509994 RAD17O75943 681 aa13.07□□□□□ -0.32
SCARB2-204ENST00000509994 HSP90B1P14625 803 aaKnown RBP13.07□□□□□ -0.32
SCARB2-204ENST00000509994 SCNN1DP51172 638 aa13.07□□□□□ -0.32
SCARB2-204ENST00000509994 CCDC30Q5VVM6 783 aa13.07□□□□□ -0.32
SCARB2-204ENST00000509994 AIDAQ96BJ3 306 aa13.07□□□□□ -0.32
SCARB2-204ENST00000509994 ISCA1Q9BUE6 129 aa13.07□□□□□ -0.32
SCARB2-204ENST00000509994 STK31Q9BXU1 1019 aa13.07□□□□□ -0.32
SCARB2-204ENST00000509994 CHMP4AQ9BY43 222 aa13.07□□□□□ -0.32
SCARB2-204ENST00000509994 VPS33BQ9H267 617 aa13.07□□□□□ -0.32
SCARB2-204ENST00000509994 PHAXQ9H814 394 aaKnown RBP13.07□□□□□ -0.32
SCARB2-204ENST00000509994 NSFL1CQ9UNZ2 370 aaKnown RBP13.07□□□□□ -0.32
SCARB2-204ENST00000509994 LRRC37AA6NMS7 1700 aa13.07□□□□□ -0.32
SCARB2-204ENST00000509994 PASKQ96RG2 1323 aa13.07□□□□□ -0.32
SCARB2-204ENST00000509994 CNTNAP1P78357 1384 aa13.07□□□□□ -0.32
SCARB2-204ENST00000509994 G3V3G9 751 aa13.06□□□□□ -0.32
SCARB2-204ENST00000509994 CAPN15O75808 1086 aa13.06□□□□□ -0.32
SCARB2-204ENST00000509994 ZNF853P0CG23 659 aa13.06□□□□□ -0.32
SCARB2-204ENST00000509994 ZEB1P37275 1124 aaPredicted RBP13.06□□□□□ -0.32
SCARB2-204ENST00000509994 GRM1Q13255 1194 aa13.06□□□□□ -0.32
SCARB2-204ENST00000509994 TNIP1Q15025 636 aa13.06□□□□□ -0.32
SCARB2-204ENST00000509994 DCAF8Q5TAQ9 597 aa13.06□□□□□ -0.32
SCARB2-204ENST00000509994 COL13A1Q5TAT6 717 aaPredicted RBP13.06□□□□□ -0.32
SCARB2-204ENST00000509994 CIAPIN1Q6FI81 312 aa13.06□□□□□ -0.32
SCARB2-204ENST00000509994 TNS4Q8IZW8 715 aa13.06□□□□□ -0.32
SCARB2-204ENST00000509994 C8orf58Q8NAV2 365 aa13.06□□□□□ -0.32
SCARB2-204ENST00000509994 TSR2Q969E8 191 aaKnown RBP13.06□□□□□ -0.32
SCARB2-204ENST00000509994 MRS2Q9HD23 443 aa13.06□□□□□ -0.32
SCARB2-204ENST00000509994 SPEF2Q9C093 1822 aa13.06□□□□□ -0.32
SCARB2-204ENST00000509994 RIMBP2O15034 1052 aa13.05□□□□□ -0.32
SCARB2-204ENST00000509994 ANP32CO43423 234 aa13.05□□□□□ -0.32
SCARB2-204ENST00000509994 ITGBL1O95965 494 aaPredicted RBP13.05□□□□□ -0.32
SCARB2-204ENST00000509994 GMPSP49915 693 aaPredicted RBP13.05□□□□□ -0.32
SCARB2-204ENST00000509994 CXCL9Q07325 125 aa13.05□□□□□ -0.32
SCARB2-204ENST00000509994 KIAA2012Q0VF49 1180 aa13.05□□□□□ -0.32
SCARB2-204ENST00000509994 WASHC4Q2M389 1173 aa13.05□□□□□ -0.32
SCARB2-204ENST00000509994 USP50Q70EL3 339 aaPredicted RBP13.05□□□□□ -0.32
SCARB2-204ENST00000509994 CELF1Q92879 486 aaKnown RBP13.05□□□□□ -0.32
SCARB2-204ENST00000509994 RTFDC1Q9BY42 306 aaPredicted RBP13.05□□□□□ -0.32
SCARB2-204ENST00000509994 GPRC5DQ9NZD1 345 aa13.05□□□□□ -0.32
SCARB2-204ENST00000509994 MYH3P11055 1940 aa13.05□□□□□ -0.32
SCARB2-204ENST00000509994 ZBTB38Q8NAP3 1195 aaPredicted RBP13.04□□□□□ -0.32
SCARB2-204ENST00000509994 JARID2Q92833 1246 aaPredicted RBP13.04□□□□□ -0.32
SCARB2-204ENST00000509994 CCDC85AQ96PX6 553 aaPredicted RBP13.04□□□□□ -0.32
SCARB2-204ENST00000509994 ADARB2Q9NS39 739 aaKnown RBP13.04□□□□□ -0.32
SCARB2-204ENST00000509994 CWC25Q9NXE8 425 aaPredicted RBP13.04□□□□□ -0.32
SCARB2-204ENST00000509994 SALL2Q9Y467 1007 aaPredicted RBP13.04□□□□□ -0.32
SCARB2-204ENST00000509994 DUOX1Q9NRD9 1551 aa13.03□□□□□ -0.32
SCARB2-204ENST00000509994 VEGFBP49765 207 aa13.03□□□□□ -0.32
SCARB2-204ENST00000509994 NEXNQ0ZGT2 675 aa13.03□□□□□ -0.32
SCARB2-204ENST00000509994 SF3B3Q15393 1217 aaKnown RBP13.03□□□□□ -0.32
SCARB2-204ENST00000509994 DEFB115Q30KQ5 88 aa13.03□□□□□ -0.32
SCARB2-204ENST00000509994 CCDC152Q4G0S7 254 aa13.03□□□□□ -0.32
SCARB2-204ENST00000509994 CCDC184Q52MB2 194 aa13.03□□□□□ -0.32
SCARB2-204ENST00000509994 EYA3Q99504 573 aa13.03□□□□□ -0.32
SCARB2-204ENST00000509994 DBNDD1Q9H9R9 158 aa13.03□□□□□ -0.32
SCARB2-204ENST00000509994 ANKIB1Q9P2G1 1089 aa13.03□□□□□ -0.32
SCARB2-204ENST00000509994 MAP3K2Q9Y2U5 619 aa13.03□□□□□ -0.32
SCARB2-204ENST00000509994 TRAF5O00463 557 aa13.02□□□□□ -0.33
SCARB2-204ENST00000509994 UFL1O94874 794 aa13.02□□□□□ -0.33
SCARB2-204ENST00000509994 RPS8P62241 208 aaKnown RBP13.02□□□□□ -0.33
SCARB2-204ENST00000509994 GPSM2P81274 684 aa13.02□□□□□ -0.33
SCARB2-204ENST00000509994 TRIM28Q13263 835 aaKnown RBP13.02□□□□□ -0.33
SCARB2-204ENST00000509994 TSPYL6Q8N831 410 aa13.02□□□□□ -0.33
SCARB2-204ENST00000509994 CCDC191Q8NCU4 936 aa13.02□□□□□ -0.33
SCARB2-204ENST00000509994 ZNF408Q9H9D4 720 aa13.02□□□□□ -0.33
SCARB2-204ENST00000509994 H7C1D1 291 aa13.01□□□□□ -0.33
SCARB2-204ENST00000509994 ECE2O60344 883 aa13.01□□□□□ -0.33
SCARB2-204ENST00000509994 PDE8AO60658 829 aa13.01□□□□□ -0.33
SCARB2-204ENST00000509994 PCCAP05165 728 aaPredicted RBP13.01□□□□□ -0.33
SCARB2-204ENST00000509994 KCNA4P22459 653 aa13.01□□□□□ -0.33
SCARB2-204ENST00000509994 FMR1Q06787 632 aaKnown RBP eCLIP13.01□□□□□ -0.33
SCARB2-204ENST00000509994 DOK7Q18PE1 504 aa13.01□□□□□ -0.33
SCARB2-204ENST00000509994 TWISTNBQ3B726 338 aaPredicted RBP13.01□□□□□ -0.33
SCARB2-204ENST00000509994 GPR101Q96P66 508 aaPredicted RBP13.01□□□□□ -0.33
SCARB2-204ENST00000509994 METTL22Q9BUU2 404 aaPredicted RBP13.01□□□□□ -0.33
SCARB2-204ENST00000509994 SEC31BQ9NQW1 1179 aa13.01□□□□□ -0.33
SCARB2-204ENST00000509994 COL4A1P02462 1669 aa13.01□□□□□ -0.33
SCARB2-204ENST00000509994 CDHR2Q9BYE9 1310 aa13□□□□□ -0.33
SCARB2-204ENST00000509994 PI4KAP2A4QPH2 592 aa13□□□□□ -0.33
SCARB2-204ENST00000509994 ANKRD18AQ8IVF6 992 aa13□□□□□ -0.33
SCARB2-204ENST00000509994 WWC1Q8IX03 1113 aa13□□□□□ -0.33
SCARB2-204ENST00000509994 MICALL2Q8IY33 904 aa13□□□□□ -0.33
SCARB2-204ENST00000509994 PI4KAP1Q8N8J0 262 aa13□□□□□ -0.33
SCARB2-204ENST00000509994 ZC3H12CQ9C0D7 883 aaKnown RBP13□□□□□ -0.33
SCARB2-204ENST00000509994 CNOT7Q9UIV1 285 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms