RNA–Protein interactions for RNA: ENST00000509639.5

DDR1-265, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 615 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-265ENST00000509639 CCDC152Q4G0S7 254 aa25.18■■□□□ 1.62
DDR1-265ENST00000509639 C9orf131Q5VYM1 1079 aa25.18■■□□□ 1.62
DDR1-265ENST00000509639 RTKN2Q8IZC4 609 aa25.18■■□□□ 1.62
DDR1-265ENST00000509639 RNF181Q9P0P0 153 aa25.18■■□□□ 1.62
DDR1-265ENST00000509639 BBOX1O75936 387 aa25.17■■□□□ 1.62
DDR1-265ENST00000509639 CTSWP56202 376 aa25.16■■□□□ 1.62
DDR1-265ENST00000509639 GRIPAP1Q4V328 841 aa25.16■■□□□ 1.62
DDR1-265ENST00000509639 TMC4Q7Z404 712 aa25.16■■□□□ 1.62
DDR1-265ENST00000509639 MYH3P11055 1940 aa25.16■■□□□ 1.62
DDR1-265ENST00000509639 SBF1O95248 1867 aa25.15■■□□□ 1.62
DDR1-265ENST00000509639 OLFM4Q6UX06 510 aa25.15■■□□□ 1.62
DDR1-265ENST00000509639 NOB1Q9ULX3 412 aaKnown RBP25.15■■□□□ 1.62
DDR1-265ENST00000509639 ATP6V0A2Q9Y487 856 aa25.15■■□□□ 1.62
DDR1-265ENST00000509639 FKBP4Q02790 459 aaKnown RBP eCLIP25.14■■□□□ 1.62
DDR1-265ENST00000509639 PLA2G12BQ9BX93 195 aa25.14■■□□□ 1.62
DDR1-265ENST00000509639 API5Q9BZZ5 524 aaKnown RBP25.14■■□□□ 1.62
DDR1-265ENST00000509639 C9orf78Q9NZ63 289 aaPredicted RBP25.14■■□□□ 1.62
DDR1-265ENST00000509639 GRM8O00222 908 aa25.13■■□□□ 1.61
DDR1-265ENST00000509639 CASP7P55210 303 aa25.13■■□□□ 1.61
DDR1-265ENST00000509639 ZNF784Q8NCA9 323 aaPredicted RBP25.12■■□□□ 1.61
DDR1-265ENST00000509639 CELF1Q92879 486 aaKnown RBP25.12■■□□□ 1.61
DDR1-265ENST00000509639 CCDC85AQ96PX6 553 aaPredicted RBP25.12■■□□□ 1.61
DDR1-265ENST00000509639 SNED1Q8TER0 1413 aa25.12■■□□□ 1.61
DDR1-265ENST00000509639 ZC3H4Q9UPT8 1303 aaKnown RBP25.12■■□□□ 1.61
DDR1-265ENST00000509639 SP8Q8IXZ3 490 aa25.11■■□□□ 1.61
DDR1-265ENST00000509639 PSMD1Q99460 953 aa25.11■■□□□ 1.61
DDR1-265ENST00000509639 TIAM2Q8IVF5 1701 aa25.11■■□□□ 1.61
DDR1-265ENST00000509639 TAF1P21675 1872 aa25.11■■□□□ 1.61
DDR1-265ENST00000509639 PRELPP51888 382 aa25.1■■□□□ 1.61
DDR1-265ENST00000509639 TTLL11Q8NHH1 800 aa25.1■■□□□ 1.61
DDR1-265ENST00000509639 ARHGAP45Q92619 1136 aa25.1■■□□□ 1.61
DDR1-265ENST00000509639 SEC31BQ9NQW1 1179 aa25.1■■□□□ 1.61
DDR1-265ENST00000509639 CCDC88AQ3V6T2 1871 aa25.1■■□□□ 1.61
DDR1-265ENST00000509639 LRRC37AA6NMS7 1700 aa25.09■■□□□ 1.61
DDR1-265ENST00000509639 RTL9Q8NET4 1388 aa25.09■■□□□ 1.61
DDR1-265ENST00000509639 IPO8O15397 1037 aaKnown RBP25.09■■□□□ 1.61
DDR1-265ENST00000509639 RPS8P62241 208 aaKnown RBP25.09■■□□□ 1.61
DDR1-265ENST00000509639 CDC5LQ99459 802 aaKnown RBP25.09■■□□□ 1.61
DDR1-265ENST00000509639 CCT4P50991 539 aaKnown RBP25.08■■□□□ 1.61
DDR1-265ENST00000509639 BCAR3O75815 825 aa25.07■■□□□ 1.6
DDR1-265ENST00000509639 ANKRD18AQ8IVF6 992 aa25.07■■□□□ 1.6
DDR1-265ENST00000509639 GREM2Q9H772 168 aa25.07■■□□□ 1.6
DDR1-265ENST00000509639 ZNF277Q9NRM2 450 aaPredicted RBP25.07■■□□□ 1.6
DDR1-265ENST00000509639 DICER1Q9UPY3 1922 aaKnown RBP25.07■■□□□ 1.6
DDR1-265ENST00000509639 COL4A1P02462 1669 aa25.07■■□□□ 1.6
DDR1-265ENST00000509639 DPP8Q6V1X1 898 aaPredicted RBP25.06■■□□□ 1.6
DDR1-265ENST00000509639 SLC51AQ86UW1 340 aa25.06■■□□□ 1.6
DDR1-265ENST00000509639 MPNDQ8N594 471 aa25.06■■□□□ 1.6
DDR1-265ENST00000509639 SUPT20HQ8NEM7 779 aa25.06■■□□□ 1.6
DDR1-265ENST00000509639 FRAT1Q92837 279 aaPredicted RBP25.06■■□□□ 1.6
DDR1-265ENST00000509639 IARSP41252 1262 aaKnown RBP25.05■■□□□ 1.6
DDR1-265ENST00000509639 ZNF526Q8TF50 670 aaPredicted RBP25.05■■□□□ 1.6
DDR1-265ENST00000509639 UTYO14607 1347 aa25.05■■□□□ 1.6
DDR1-265ENST00000509639 CSF1RP07333 972 aa25.04■■□□□ 1.6
DDR1-265ENST00000509639 FAM161AQ3B820 660 aa25.04■■□□□ 1.6
DDR1-265ENST00000509639 GPBP1L1Q9HC44 474 aaPredicted RBP25.04■■□□□ 1.6
DDR1-265ENST00000509639 NBPF7P0C2Y1 421 aaPredicted RBP25.03■■□□□ 1.6
DDR1-265ENST00000509639 ITGA6P23229 1130 aa25.03■■□□□ 1.6
DDR1-265ENST00000509639 ATF7IPQ6VMQ6 1270 aa25.03■■□□□ 1.6
DDR1-265ENST00000509639 CHMP3Q9Y3E7 222 aa25.03■■□□□ 1.6
DDR1-265ENST00000509639 IGHMBP2P38935 993 aaKnown RBP25.02■■□□□ 1.6
DDR1-265ENST00000509639 FOXO4P98177 505 aa25.02■■□□□ 1.6
DDR1-265ENST00000509639 RTFDC1Q9BY42 306 aaPredicted RBP25.02■■□□□ 1.6
DDR1-265ENST00000509639 ANKRD18BA2A2Z9 1011 aa25.01■■□□□ 1.59
DDR1-265ENST00000509639 TRIM27P14373 513 aa25.01■■□□□ 1.59
DDR1-265ENST00000509639 ZKSCAN2Q63HK3 967 aa25.01■■□□□ 1.59
DDR1-265ENST00000509639 JDP2Q8WYK2 163 aa25.01■■□□□ 1.59
DDR1-265ENST00000509639 SUCLG2Q96I99 432 aa25.01■■□□□ 1.59
DDR1-265ENST00000509639 VPS33BQ9H267 617 aa25.01■■□□□ 1.59
DDR1-265ENST00000509639 NSFL1CQ9UNZ2 370 aaKnown RBP25.01■■□□□ 1.59
DDR1-265ENST00000509639 KDM2BQ8NHM5 1336 aa25.01■■□□□ 1.59
DDR1-265ENST00000509639 SPEF2Q9C093 1822 aa25■■□□□ 1.59
DDR1-265ENST00000509639 IFIT5Q13325 482 aaKnown RBP25■■□□□ 1.59
DDR1-265ENST00000509639 EPHA10Q5JZY3 1008 aa25■■□□□ 1.59
DDR1-265ENST00000509639 LMBR1LQ6UX01 489 aa25■■□□□ 1.59
DDR1-265ENST00000509639 LARGE2Q8N3Y3 721 aa25■■□□□ 1.59
DDR1-265ENST00000509639 USP44Q9H0E7 712 aa25■■□□□ 1.59
DDR1-265ENST00000509639 PPIP5K2O43314 1243 aa24.99■■□□□ 1.59
DDR1-265ENST00000509639 DUOX1Q9NRD9 1551 aa24.99■■□□□ 1.59
DDR1-265ENST00000509639 BSDC1Q9NW68 430 aaPredicted RBP24.99■■□□□ 1.59
DDR1-265ENST00000509639 GPSM2P81274 684 aa24.98■■□□□ 1.59
DDR1-265ENST00000509639 CCDC57Q2TAC2 916 aa24.98■■□□□ 1.59
DDR1-265ENST00000509639 INTS3Q68E01 1043 aaKnown RBP24.98■■□□□ 1.59
DDR1-265ENST00000509639 DPY19L2Q6NUT2 758 aa24.98■■□□□ 1.59
DDR1-265ENST00000509639 YTHDC1Q96MU7 727 aaKnown RBP24.98■■□□□ 1.59
DDR1-265ENST00000509639 MPHOSPH8Q99549 860 aa24.98■■□□□ 1.59
DDR1-265ENST00000509639 ANKIB1Q9P2G1 1089 aa24.98■■□□□ 1.59
DDR1-265ENST00000509639 LTBP1Q14766 1721 aa24.98■■□□□ 1.59
DDR1-265ENST00000509639 UBTFL1P0CB47 393 aaPredicted RBP24.97■■□□□ 1.59
DDR1-265ENST00000509639 AOC3Q16853 763 aa24.97■■□□□ 1.59
DDR1-265ENST00000509639 NIM1KQ8IY84 436 aa24.97■■□□□ 1.59
DDR1-265ENST00000509639 XDHP47989 1333 aa24.96■■□□□ 1.59
DDR1-265ENST00000509639 GLTPD2A6NH11 291 aa24.96■■□□□ 1.59
DDR1-265ENST00000509639 C6orf229H3BNL8 230 aa24.96■■□□□ 1.59
DDR1-265ENST00000509639 TAF7LQ5H9L4 462 aa24.96■■□□□ 1.59
DDR1-265ENST00000509639 CLUAP1Q96AJ1 413 aa24.96■■□□□ 1.59
DDR1-265ENST00000509639 BICC1Q9H694 974 aaKnown RBP24.96■■□□□ 1.59
DDR1-265ENST00000509639 PODXL2Q9NZ53 605 aa24.96■■□□□ 1.59
DDR1-265ENST00000509639 HDAC5Q9UQL6 1122 aa24.96■■□□□ 1.59
DDR1-265ENST00000509639 KIAA2012Q0VF49 1180 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms