RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 PASKQ96RG2 1323 aa19.91■□□□□ 0.78
TPM3-219ENST00000509409 RTFDC1Q9BY42 306 aaPredicted RBP19.9■□□□□ 0.78
TPM3-219ENST00000509409 ZNRF3Q9ULT6 936 aa19.9■□□□□ 0.78
TPM3-219ENST00000509409 SCN4AP35499 1836 aa19.89■□□□□ 0.77
TPM3-219ENST00000509409 COL13A1Q5TAT6 717 aaPredicted RBP19.89■□□□□ 0.77
TPM3-219ENST00000509409 TMC4Q7Z404 712 aa19.89■□□□□ 0.77
TPM3-219ENST00000509409 CHMP4AQ9BY43 222 aa19.89■□□□□ 0.77
TPM3-219ENST00000509409 PHAXQ9H814 394 aaKnown RBP19.89■□□□□ 0.77
TPM3-219ENST00000509409 IRS4O14654 1257 aaPredicted RBP19.88■□□□□ 0.77
TPM3-219ENST00000509409 SCNN1DP51172 638 aa19.88■□□□□ 0.77
TPM3-219ENST00000509409 TRIM28Q13263 835 aaKnown RBP19.88■□□□□ 0.77
TPM3-219ENST00000509409 C8orf58Q8NAV2 365 aa19.88■□□□□ 0.77
TPM3-219ENST00000509409 CXCL9Q07325 125 aa19.87■□□□□ 0.77
TPM3-219ENST00000509409 SF3B3Q15393 1217 aaKnown RBP19.87■□□□□ 0.77
TPM3-219ENST00000509409 USP50Q70EL3 339 aaPredicted RBP19.87■□□□□ 0.77
TPM3-219ENST00000509409 MYD88Q99836 296 aa19.87■□□□□ 0.77
TPM3-219ENST00000509409 COL4A5P29400 1685 aa19.87■□□□□ 0.77
TPM3-219ENST00000509409 KIAA2012Q0VF49 1180 aa19.86■□□□□ 0.77
TPM3-219ENST00000509409 TNIP1Q15025 636 aa19.86■□□□□ 0.77
TPM3-219ENST00000509409 CCDC30Q5VVM6 783 aa19.86■□□□□ 0.77
TPM3-219ENST00000509409 CIAPIN1Q6FI81 312 aa19.86■□□□□ 0.77
TPM3-219ENST00000509409 BCL2L13Q9BXK5 485 aa19.86■□□□□ 0.77
TPM3-219ENST00000509409 NSFL1CQ9UNZ2 370 aaKnown RBP19.86■□□□□ 0.77
TPM3-219ENST00000509409 RAD17O75943 681 aa19.85■□□□□ 0.77
TPM3-219ENST00000509409 DDX58O95786 925 aaKnown RBP19.85■□□□□ 0.77
TPM3-219ENST00000509409 HSP90B1P14625 803 aaKnown RBP19.85■□□□□ 0.77
TPM3-219ENST00000509409 CCDC184Q52MB2 194 aa19.85■□□□□ 0.77
TPM3-219ENST00000509409 CELF1Q92879 486 aaKnown RBP19.85■□□□□ 0.77
TPM3-219ENST00000509409 CNTNAP1P78357 1384 aa19.84■□□□□ 0.77
TPM3-219ENST00000509409 C6orf229H3BNL8 230 aa19.84■□□□□ 0.77
TPM3-219ENST00000509409 ZEB1P37275 1124 aaPredicted RBP19.84■□□□□ 0.77
TPM3-219ENST00000509409 GMPSP49915 693 aaPredicted RBP19.84■□□□□ 0.77
TPM3-219ENST00000509409 ZBTB38Q8NAP3 1195 aaPredicted RBP19.84■□□□□ 0.77
TPM3-219ENST00000509409 ADARB2Q9NS39 739 aaKnown RBP19.84■□□□□ 0.77
TPM3-219ENST00000509409 GPRC5DQ9NZD1 345 aa19.84■□□□□ 0.77
TPM3-219ENST00000509409 PCNTO95613 3336 aa19.84■□□□□ 0.77
TPM3-219ENST00000509409 RIMBP2O15034 1052 aa19.83■□□□□ 0.77
TPM3-219ENST00000509409 VEGFBP49765 207 aa19.83■□□□□ 0.77
TPM3-219ENST00000509409 WASHC4Q2M389 1173 aa19.83■□□□□ 0.77
TPM3-219ENST00000509409 DEFB115Q30KQ5 88 aa19.83■□□□□ 0.77
TPM3-219ENST00000509409 ABT1Q9ULW3 272 aaKnown RBP19.83■□□□□ 0.77
TPM3-219ENST00000509409 RPS8P62241 208 aaKnown RBP19.82■□□□□ 0.76
TPM3-219ENST00000509409 TNS4Q8IZW8 715 aa19.82■□□□□ 0.76
TPM3-219ENST00000509409 TSPYL6Q8N831 410 aa19.82■□□□□ 0.76
TPM3-219ENST00000509409 CCDC191Q8NCU4 936 aa19.82■□□□□ 0.76
TPM3-219ENST00000509409 JARID2Q92833 1246 aaPredicted RBP19.82■□□□□ 0.76
TPM3-219ENST00000509409 TSR2Q969E8 191 aaKnown RBP19.82■□□□□ 0.76
TPM3-219ENST00000509409 CWC25Q9NXE8 425 aaPredicted RBP19.82■□□□□ 0.76
TPM3-219ENST00000509409 ANKRD36CQ5JPF3 1778 aa19.81■□□□□ 0.76
TPM3-219ENST00000509409 GPSM2P81274 684 aa19.81■□□□□ 0.76
TPM3-219ENST00000509409 METTL22Q9BUU2 404 aaPredicted RBP19.81■□□□□ 0.76
TPM3-219ENST00000509409 FMR1Q06787 632 aaKnown RBP eCLIP19.8■□□□□ 0.76
TPM3-219ENST00000509409 AIDAQ96BJ3 306 aa19.8■□□□□ 0.76
TPM3-219ENST00000509409 EYA3Q99504 573 aa19.8■□□□□ 0.76
TPM3-219ENST00000509409 STK31Q9BXU1 1019 aa19.8■□□□□ 0.76
TPM3-219ENST00000509409 YDJCA8MPS7 323 aa19.79■□□□□ 0.76
TPM3-219ENST00000509409 H7C1D1 291 aa19.79■□□□□ 0.76
TPM3-219ENST00000509409 ANP32CO43423 234 aa19.79■□□□□ 0.76
TPM3-219ENST00000509409 PDE8AO60658 829 aa19.79■□□□□ 0.76
TPM3-219ENST00000509409 PCCAP05165 728 aaPredicted RBP19.79■□□□□ 0.76
TPM3-219ENST00000509409 CCDC152Q4G0S7 254 aa19.79■□□□□ 0.76
TPM3-219ENST00000509409 WWC1Q8IX03 1113 aa19.79■□□□□ 0.76
TPM3-219ENST00000509409 CCDC85AQ96PX6 553 aaPredicted RBP19.79■□□□□ 0.76
TPM3-219ENST00000509409 DBNDD1Q9H9R9 158 aa19.79■□□□□ 0.76
TPM3-219ENST00000509409 MRS2Q9HD23 443 aa19.79■□□□□ 0.76
TPM3-219ENST00000509409 SEC31BQ9NQW1 1179 aa19.79■□□□□ 0.76
TPM3-219ENST00000509409 POLLQ9UGP5 575 aa19.79■□□□□ 0.76
TPM3-219ENST00000509409 CNOT7Q9UIV1 285 aaKnown RBP19.79■□□□□ 0.76
TPM3-219ENST00000509409 MAP3K2Q9Y2U5 619 aa19.79■□□□□ 0.76
TPM3-219ENST00000509409 G3V3G9 751 aa19.78■□□□□ 0.76
TPM3-219ENST00000509409 TRAF5O00463 557 aa19.78■□□□□ 0.76
TPM3-219ENST00000509409 DOK7Q18PE1 504 aa19.78■□□□□ 0.76
TPM3-219ENST00000509409 CCDC27Q2M243 656 aa19.78■□□□□ 0.76
TPM3-219ENST00000509409 DCAF8Q5TAQ9 597 aa19.78■□□□□ 0.76
TPM3-219ENST00000509409 PAXIP1Q6ZW49 1069 aaPredicted RBP19.78■□□□□ 0.76
TPM3-219ENST00000509409 ANKIB1Q9P2G1 1089 aa19.78■□□□□ 0.76
TPM3-219ENST00000509409 SALL2Q9Y467 1007 aaPredicted RBP19.78■□□□□ 0.76
TPM3-219ENST00000509409 PI4KAP2A4QPH2 592 aa19.77■□□□□ 0.76
TPM3-219ENST00000509409 RASSF10A6NK89 507 aa19.77■□□□□ 0.76
TPM3-219ENST00000509409 KSR2Q6VAB6 950 aa19.77■□□□□ 0.76
TPM3-219ENST00000509409 PI4KAP1Q8N8J0 262 aa19.77■□□□□ 0.76
TPM3-219ENST00000509409 ZC3H12CQ9C0D7 883 aaKnown RBP19.77■□□□□ 0.76
TPM3-219ENST00000509409 LAMB2P55268 1798 aa19.76■□□□□ 0.75
TPM3-219ENST00000509409 ZNF316A6NFI3 1004 aaPredicted RBP19.76■□□□□ 0.75
TPM3-219ENST00000509409 PSMD14O00487 310 aa19.76■□□□□ 0.75
TPM3-219ENST00000509409 CAPN15O75808 1086 aa19.76■□□□□ 0.75
TPM3-219ENST00000509409 NEXNQ0ZGT2 675 aa19.76■□□□□ 0.75
TPM3-219ENST00000509409 TWISTNBQ3B726 338 aaPredicted RBP19.76■□□□□ 0.75
TPM3-219ENST00000509409 TBC1D16Q8TBP0 767 aa19.76■□□□□ 0.75
TPM3-219ENST00000509409 GPR101Q96P66 508 aaPredicted RBP19.76■□□□□ 0.75
TPM3-219ENST00000509409 ZBTB12Q9Y330 459 aaPredicted RBP19.76■□□□□ 0.75
TPM3-219ENST00000509409 LTBP1Q14766 1721 aa19.76■□□□□ 0.75
TPM3-219ENST00000509409 WDR33Q9C0J8 1336 aaKnown RBP19.76■□□□□ 0.75
TPM3-219ENST00000509409 ADAMTSL1Q8N6G6 1762 aa19.75■□□□□ 0.75
TPM3-219ENST00000509409 FOXN1O15353 648 aa19.75■□□□□ 0.75
TPM3-219ENST00000509409 SLC4A2P04920 1241 aa19.75■□□□□ 0.75
TPM3-219ENST00000509409 GRM1Q13255 1194 aa19.75■□□□□ 0.75
TPM3-219ENST00000509409 MICALL2Q8IY33 904 aa19.75■□□□□ 0.75
TPM3-219ENST00000509409 CDHR2Q9BYE9 1310 aa19.75■□□□□ 0.75
TPM3-219ENST00000509409 ECE2O60344 883 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms