RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 NEXNQ0ZGT2 675 aa11.16□□□□□ -0.62
PDLIM5-213ENST00000509357 TRIM28Q13263 835 aaKnown RBP11.16□□□□□ -0.62
PDLIM5-213ENST00000509357 KSR2Q6VAB6 950 aa11.16□□□□□ -0.62
PDLIM5-213ENST00000509357 PI4KAP1Q8N8J0 262 aa11.16□□□□□ -0.62
PDLIM5-213ENST00000509357 PSMD1Q99460 953 aa11.16□□□□□ -0.62
PDLIM5-213ENST00000509357 CWC25Q9NXE8 425 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-213ENST00000509357 ATP6V0A2Q9Y487 856 aa11.16□□□□□ -0.62
PDLIM5-213ENST00000509357 GRAPQ13588 217 aa11.15□□□□□ -0.62
PDLIM5-213ENST00000509357 DPP8Q6V1X1 898 aaPredicted RBP11.15□□□□□ -0.62
PDLIM5-213ENST00000509357 LARGE2Q8N3Y3 721 aa11.15□□□□□ -0.62
PDLIM5-213ENST00000509357 ZBTB38Q8NAP3 1195 aaPredicted RBP11.15□□□□□ -0.62
PDLIM5-213ENST00000509357 CCDC191Q8NCU4 936 aa11.15□□□□□ -0.62
PDLIM5-213ENST00000509357 SMC1BQ8NDV3 1235 aa11.15□□□□□ -0.62
PDLIM5-213ENST00000509357 GRAPLQ8TC17 118 aaPredicted RBP11.15□□□□□ -0.62
PDLIM5-213ENST00000509357 JARID2Q92833 1246 aaPredicted RBP11.15□□□□□ -0.62
PDLIM5-213ENST00000509357 METTL22Q9BUU2 404 aaPredicted RBP11.15□□□□□ -0.62
PDLIM5-213ENST00000509357 PPIP5K2O43314 1243 aa11.14□□□□□ -0.63
PDLIM5-213ENST00000509357 EIF6P56537 245 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-213ENST00000509357 FSTL1Q12841 308 aa11.14□□□□□ -0.63
PDLIM5-213ENST00000509357 FKBP5Q13451 457 aaPredicted RBP11.14□□□□□ -0.63
PDLIM5-213ENST00000509357 CWF19L2Q2TBE0 894 aaKnown RBP11.14□□□□□ -0.63
PDLIM5-213ENST00000509357 ALDH1L2Q3SY69 923 aa11.14□□□□□ -0.63
PDLIM5-213ENST00000509357 SP8Q8IXZ3 490 aa11.14□□□□□ -0.63
PDLIM5-213ENST00000509357 MPNDQ8N594 471 aa11.14□□□□□ -0.63
PDLIM5-213ENST00000509357 SUPT20HQ8NEM7 779 aa11.14□□□□□ -0.63
PDLIM5-213ENST00000509357 GJA3Q9Y6H8 435 aa11.14□□□□□ -0.63
PDLIM5-213ENST00000509357 MYH3P11055 1940 aa11.13□□□□□ -0.63
PDLIM5-213ENST00000509357 SBF1O95248 1867 aa11.13□□□□□ -0.63
PDLIM5-213ENST00000509357 IQCA1LA6NCM1 817 aa11.13□□□□□ -0.63
PDLIM5-213ENST00000509357 PCCAP05165 728 aaPredicted RBP11.13□□□□□ -0.63
PDLIM5-213ENST00000509357 APLP1P51693 650 aa11.13□□□□□ -0.63
PDLIM5-213ENST00000509357 BRPF1P55201 1214 aaPredicted RBP11.13□□□□□ -0.63
PDLIM5-213ENST00000509357 CASP7P55210 303 aa11.13□□□□□ -0.63
PDLIM5-213ENST00000509357 SF3B3Q15393 1217 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-213ENST00000509357 BEND3Q5T5X7 828 aa11.13□□□□□ -0.63
PDLIM5-213ENST00000509357 TMC4Q7Z404 712 aa11.13□□□□□ -0.63
PDLIM5-213ENST00000509357 NIM1KQ8IY84 436 aa11.13□□□□□ -0.63
PDLIM5-213ENST00000509357 NOB1Q9ULX3 412 aaKnown RBP11.13□□□□□ -0.63
PDLIM5-213ENST00000509357 ZNF541Q9H0D2 1346 aa11.12□□□□□ -0.63
PDLIM5-213ENST00000509357 SPEF2Q9C093 1822 aa11.12□□□□□ -0.63
PDLIM5-213ENST00000509357 CT47B1P0C2W7 299 aaPredicted RBP11.12□□□□□ -0.63
PDLIM5-213ENST00000509357 AOC3Q16853 763 aa11.12□□□□□ -0.63
PDLIM5-213ENST00000509357 CCDC152Q4G0S7 254 aa11.12□□□□□ -0.63
PDLIM5-213ENST00000509357 CCDC85AQ96PX6 553 aaPredicted RBP11.12□□□□□ -0.63
PDLIM5-213ENST00000509357 SMC4Q9NTJ3 1288 aa11.12□□□□□ -0.63
PDLIM5-213ENST00000509357 NSFL1CQ9UNZ2 370 aaKnown RBP11.12□□□□□ -0.63
PDLIM5-213ENST00000509357 FER1L6Q2WGJ9 1857 aa11.11□□□□□ -0.63
PDLIM5-213ENST00000509357 NEURL1BA8MQ27 555 aa11.11□□□□□ -0.63
PDLIM5-213ENST00000509357 FZD9O00144 591 aa11.11□□□□□ -0.63
PDLIM5-213ENST00000509357 PDE8AO60658 829 aa11.11□□□□□ -0.63
PDLIM5-213ENST00000509357 RLBP1P12271 317 aa11.11□□□□□ -0.63
PDLIM5-213ENST00000509357 RPS8P62241 208 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-213ENST00000509357 EAPPQ56P03 285 aaPredicted RBP11.11□□□□□ -0.63
PDLIM5-213ENST00000509357 DNAAF4Q8WXU2 420 aa11.11□□□□□ -0.63
PDLIM5-213ENST00000509357 CELF1Q92879 486 aaKnown RBP11.11□□□□□ -0.63
PDLIM5-213ENST00000509357 HACL1Q9UJ83 578 aa11.11□□□□□ -0.63
PDLIM5-213ENST00000509357 CLEC11AQ9Y240 323 aa11.11□□□□□ -0.63
PDLIM5-213ENST00000509357 A0A1B0GUL6 1792 aa11.11□□□□□ -0.63
PDLIM5-213ENST00000509357 POTECB2RU33 542 aa11.1□□□□□ -0.63
PDLIM5-213ENST00000509357 C6orf229H3BNL8 230 aa11.1□□□□□ -0.63
PDLIM5-213ENST00000509357 TRIM27P14373 513 aa11.1□□□□□ -0.63
PDLIM5-213ENST00000509357 LMOD1P29536 600 aaPredicted RBP11.1□□□□□ -0.63
PDLIM5-213ENST00000509357 GPC2Q8N158 579 aa11.1□□□□□ -0.63
PDLIM5-213ENST00000509357 VPS33BQ9H267 617 aa11.1□□□□□ -0.63
PDLIM5-213ENST00000509357 CEP350Q5VT06 3117 aa11.1□□□□□ -0.63
PDLIM5-213ENST00000509357 TIAM2Q8IVF5 1701 aa11.09□□□□□ -0.63
PDLIM5-213ENST00000509357 CCDC88AQ3V6T2 1871 aa11.09□□□□□ -0.63
PDLIM5-213ENST00000509357 G3V3G9 751 aa11.09□□□□□ -0.63
PDLIM5-213ENST00000509357 RIMBP2O15034 1052 aa11.09□□□□□ -0.63
PDLIM5-213ENST00000509357 DCAF8Q5TAQ9 597 aa11.09□□□□□ -0.63
PDLIM5-213ENST00000509357 CHADLQ6NUI6 762 aa11.09□□□□□ -0.63
PDLIM5-213ENST00000509357 UBE3BQ7Z3V4 1068 aa11.09□□□□□ -0.63
PDLIM5-213ENST00000509357 KAZALD1Q96I82 304 aa11.09□□□□□ -0.63
PDLIM5-213ENST00000509357 L3MBTL3Q96JM7 780 aaPredicted RBP11.09□□□□□ -0.63
PDLIM5-213ENST00000509357 RTFDC1Q9BY42 306 aaPredicted RBP11.09□□□□□ -0.63
PDLIM5-213ENST00000509357 TAF1DQ9H5J8 278 aaPredicted RBP11.09□□□□□ -0.63
PDLIM5-213ENST00000509357 SEC31BQ9NQW1 1179 aa11.09□□□□□ -0.63
PDLIM5-213ENST00000509357 ANKIB1Q9P2G1 1089 aa11.09□□□□□ -0.63
PDLIM5-213ENST00000509357 LRRC37AA6NMS7 1700 aa11.09□□□□□ -0.63
PDLIM5-213ENST00000509357 SNED1Q8TER0 1413 aa11.09□□□□□ -0.63
PDLIM5-213ENST00000509357 PTPRCP08575 1304 aa11.09□□□□□ -0.63
PDLIM5-213ENST00000509357 PLIN1O60240 522 aa11.08□□□□□ -0.64
PDLIM5-213ENST00000509357 EPHX2P34913 555 aa11.08□□□□□ -0.64
PDLIM5-213ENST00000509357 GPSM2P81274 684 aa11.08□□□□□ -0.64
PDLIM5-213ENST00000509357 WASHC4Q2M389 1173 aa11.08□□□□□ -0.64
PDLIM5-213ENST00000509357 EPHA10Q5JZY3 1008 aa11.08□□□□□ -0.64
PDLIM5-213ENST00000509357 C20orf194Q5TEA3 1177 aa11.08□□□□□ -0.64
PDLIM5-213ENST00000509357 PNMA8AQ86V59 439 aaPredicted RBP11.08□□□□□ -0.64
PDLIM5-213ENST00000509357 ANKRD18AQ8IVF6 992 aa11.08□□□□□ -0.64
PDLIM5-213ENST00000509357 LINS1Q8NG48 757 aa11.08□□□□□ -0.64
PDLIM5-213ENST00000509357 EYA3Q99504 573 aa11.08□□□□□ -0.64
PDLIM5-213ENST00000509357 ZNRF3Q9ULT6 936 aa11.08□□□□□ -0.64
PDLIM5-213ENST00000509357 LTBP1Q14766 1721 aa11.08□□□□□ -0.64
PDLIM5-213ENST00000509357 CDHR2Q9BYE9 1310 aa11.08□□□□□ -0.64
PDLIM5-213ENST00000509357 H7C1W4 665 aa11.07□□□□□ -0.64
PDLIM5-213ENST00000509357 CTSWP56202 376 aa11.07□□□□□ -0.64
PDLIM5-213ENST00000509357 HTRA3P83110 453 aa11.07□□□□□ -0.64
PDLIM5-213ENST00000509357 KIAA2012Q0VF49 1180 aa11.07□□□□□ -0.64
PDLIM5-213ENST00000509357 GCKRQ14397 625 aa11.07□□□□□ -0.64
PDLIM5-213ENST00000509357 SLC4A10Q6U841 1118 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms