RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 GCKRQ14397 625 aa23.21■■□□□ 1.31
CLDND1-220ENST00000508902 GRAPQ13588 217 aa23.2■■□□□ 1.3
CLDND1-220ENST00000508902 SOGA3Q5TF21 947 aa23.2■■□□□ 1.3
CLDND1-220ENST00000508902 LINS1Q8NG48 757 aa23.2■■□□□ 1.3
CLDND1-220ENST00000508902 GRAPLQ8TC17 118 aaPredicted RBP23.2■■□□□ 1.3
CLDND1-220ENST00000508902 SEC31BQ9NQW1 1179 aa23.2■■□□□ 1.3
CLDND1-220ENST00000508902 ZNF277Q9NRM2 450 aaPredicted RBP23.2■■□□□ 1.3
CLDND1-220ENST00000508902 NEXNQ0ZGT2 675 aa23.19■■□□□ 1.3
CLDND1-220ENST00000508902 UBE3BQ7Z3V4 1068 aa23.19■■□□□ 1.3
CLDND1-220ENST00000508902 ATP6V0A2Q9Y487 856 aa23.19■■□□□ 1.3
CLDND1-220ENST00000508902 DDX46Q7L014 1031 aaKnown RBP23.18■■□□□ 1.3
CLDND1-220ENST00000508902 CCDC85AQ96PX6 553 aaPredicted RBP23.18■■□□□ 1.3
CLDND1-220ENST00000508902 PDE8AO60658 829 aa23.17■■□□□ 1.3
CLDND1-220ENST00000508902 KIF3CO14782 793 aa23.16■■□□□ 1.3
CLDND1-220ENST00000508902 PSMD1Q99460 953 aa23.16■■□□□ 1.3
CLDND1-220ENST00000508902 NMRK2Q9NPI5 230 aa23.16■■□□□ 1.3
CLDND1-220ENST00000508902 CTSWP56202 376 aa23.15■■□□□ 1.3
CLDND1-220ENST00000508902 ALDH1L2Q3SY69 923 aa23.15■■□□□ 1.3
CLDND1-220ENST00000508902 RTKN2Q8IZC4 609 aa23.15■■□□□ 1.3
CLDND1-220ENST00000508902 ZBED9Q6R2W3 1325 aa23.14■■□□□ 1.3
CLDND1-220ENST00000508902 ZC3H4Q9UPT8 1303 aaKnown RBP23.14■■□□□ 1.3
CLDND1-220ENST00000508902 WDR90Q96KV7 1748 aa23.14■■□□□ 1.3
CLDND1-220ENST00000508902 BBOX1O75936 387 aa23.14■■□□□ 1.29
CLDND1-220ENST00000508902 RARSP54136 660 aaKnown RBP23.14■■□□□ 1.29
CLDND1-220ENST00000508902 SP8Q8IXZ3 490 aa23.14■■□□□ 1.29
CLDND1-220ENST00000508902 TTLL11Q8NHH1 800 aa23.14■■□□□ 1.29
CLDND1-220ENST00000508902 PLA2G12BQ9BX93 195 aa23.14■■□□□ 1.29
CLDND1-220ENST00000508902 GPBP1L1Q9HC44 474 aaPredicted RBP23.14■■□□□ 1.29
CLDND1-220ENST00000508902 EPHA10Q5JZY3 1008 aa23.13■■□□□ 1.29
CLDND1-220ENST00000508902 CC2D2BQ6DHV5 1058 aa23.13■■□□□ 1.29
CLDND1-220ENST00000508902 GREM2Q9H772 168 aa23.13■■□□□ 1.29
CLDND1-220ENST00000508902 SMC4Q9NTJ3 1288 aa23.13■■□□□ 1.29
CLDND1-220ENST00000508902 A0A1B0GUL6 1792 aa23.13■■□□□ 1.29
CLDND1-220ENST00000508902 ZNF541Q9H0D2 1346 aa23.12■■□□□ 1.29
CLDND1-220ENST00000508902 CT47B1P0C2W7 299 aaPredicted RBP23.12■■□□□ 1.29
CLDND1-220ENST00000508902 IARSP41252 1262 aaKnown RBP23.12■■□□□ 1.29
CLDND1-220ENST00000508902 RTL9Q8NET4 1388 aa23.12■■□□□ 1.29
CLDND1-220ENST00000508902 PTPRCP08575 1304 aa23.11■■□□□ 1.29
CLDND1-220ENST00000508902 BRPF1P55201 1214 aaPredicted RBP23.11■■□□□ 1.29
CLDND1-220ENST00000508902 SLC4A10Q6U841 1118 aa23.11■■□□□ 1.29
CLDND1-220ENST00000508902 RTFDC1Q9BY42 306 aaPredicted RBP23.11■■□□□ 1.29
CLDND1-220ENST00000508902 POTECB2RU33 542 aa23.1■■□□□ 1.29
CLDND1-220ENST00000508902 FOXO4P98177 505 aa23.1■■□□□ 1.29
CLDND1-220ENST00000508902 CCDC152Q4G0S7 254 aa23.1■■□□□ 1.29
CLDND1-220ENST00000508902 KAZALD1Q96I82 304 aa23.1■■□□□ 1.29
CLDND1-220ENST00000508902 GLTPD2A6NH11 291 aa23.09■■□□□ 1.29
CLDND1-220ENST00000508902 GRM8O00222 908 aa23.09■■□□□ 1.29
CLDND1-220ENST00000508902 ALDH1L1O75891 902 aa23.09■■□□□ 1.29
CLDND1-220ENST00000508902 CSF1RP07333 972 aa23.09■■□□□ 1.29
CLDND1-220ENST00000508902 RPS8P62241 208 aaKnown RBP23.09■■□□□ 1.29
CLDND1-220ENST00000508902 FAM161AQ3B820 660 aa23.09■■□□□ 1.29
CLDND1-220ENST00000508902 TNNQ9UQP3 1299 aa23.09■■□□□ 1.29
CLDND1-220ENST00000508902 GPSM2P81274 684 aa23.08■■□□□ 1.29
CLDND1-220ENST00000508902 SRCIN1Q9C0H9 1055 aa23.08■■□□□ 1.29
CLDND1-220ENST00000508902 NOB1Q9ULX3 412 aaKnown RBP23.08■■□□□ 1.29
CLDND1-220ENST00000508902 UTYO14607 1347 aa23.08■■□□□ 1.28
CLDND1-220ENST00000508902 FZD9O00144 591 aa23.07■■□□□ 1.28
CLDND1-220ENST00000508902 NBPF7P0C2Y1 421 aaPredicted RBP23.07■■□□□ 1.28
CLDND1-220ENST00000508902 AOC3Q16853 763 aa23.07■■□□□ 1.28
CLDND1-220ENST00000508902 MPNDQ8N594 471 aa23.07■■□□□ 1.28
CLDND1-220ENST00000508902 GPR101Q96P66 508 aaPredicted RBP23.07■■□□□ 1.28
CLDND1-220ENST00000508902 WTIPA6NIX2 430 aaPredicted RBP23.06■■□□□ 1.28
CLDND1-220ENST00000508902 BCAR3O75815 825 aa23.06■■□□□ 1.28
CLDND1-220ENST00000508902 DDNO94850 711 aaPredicted RBP23.06■■□□□ 1.28
CLDND1-220ENST00000508902 DPP8Q6V1X1 898 aaPredicted RBP23.06■■□□□ 1.28
CLDND1-220ENST00000508902 SUCLG2Q96I99 432 aa23.06■■□□□ 1.28
CLDND1-220ENST00000508902 POLLQ9UGP5 575 aa23.06■■□□□ 1.28
CLDND1-220ENST00000508902 SCN9AQ15858 1988 aa23.05■■□□□ 1.28
CLDND1-220ENST00000508902 HSP90B1P14625 803 aaKnown RBP23.05■■□□□ 1.28
CLDND1-220ENST00000508902 TMC4Q7Z404 712 aa23.05■■□□□ 1.28
CLDND1-220ENST00000508902 RRAGCQ9HB90 399 aa23.05■■□□□ 1.28
CLDND1-220ENST00000508902 GRIPAP1Q4V328 841 aa23.04■■□□□ 1.28
CLDND1-220ENST00000508902 KDM2BQ8NHM5 1336 aa23.04■■□□□ 1.28
CLDND1-220ENST00000508902 PPIP5K2O43314 1243 aa23.03■■□□□ 1.28
CLDND1-220ENST00000508902 ITGA6P23229 1130 aa23.03■■□□□ 1.28
CLDND1-220ENST00000508902 LARGE2Q8N3Y3 721 aa23.03■■□□□ 1.28
CLDND1-220ENST00000508902 ZNF646O15015 1829 aaPredicted RBP23.03■■□□□ 1.28
CLDND1-220ENST00000508902 C1QTNF8P60827 252 aa23.02■■□□□ 1.28
CLDND1-220ENST00000508902 KIAA2012Q0VF49 1180 aa23.02■■□□□ 1.28
CLDND1-220ENST00000508902 ANKRD18AQ8IVF6 992 aa23.02■■□□□ 1.28
CLDND1-220ENST00000508902 USP44Q9H0E7 712 aa23.02■■□□□ 1.28
CLDND1-220ENST00000508902 ANKRD44Q8N8A2 993 aa23.01■■□□□ 1.27
CLDND1-220ENST00000508902 TBC1D16Q8TBP0 767 aa23.01■■□□□ 1.27
CLDND1-220ENST00000508902 PODXL2Q9NZ53 605 aa23.01■■□□□ 1.27
CLDND1-220ENST00000508902 NSFL1CQ9UNZ2 370 aaKnown RBP23.01■■□□□ 1.27
CLDND1-220ENST00000508902 SCN4AP35499 1836 aa23.01■■□□□ 1.27
CLDND1-220ENST00000508902 YDJCA8MPS7 323 aa23■■□□□ 1.27
CLDND1-220ENST00000508902 LMBR1LQ6UX01 489 aa23■■□□□ 1.27
CLDND1-220ENST00000508902 C9orf78Q9NZ63 289 aaPredicted RBP23■■□□□ 1.27
CLDND1-220ENST00000508902 MINPP1Q9UNW1 487 aa23■■□□□ 1.27
CLDND1-220ENST00000508902 ADAMTSL1Q8N6G6 1762 aa22.99■■□□□ 1.27
CLDND1-220ENST00000508902 L3MBTL3Q96JM7 780 aaPredicted RBP22.99■■□□□ 1.27
CLDND1-220ENST00000508902 CDC5LQ99459 802 aaKnown RBP22.99■■□□□ 1.27
CLDND1-220ENST00000508902 BSDC1Q9NW68 430 aaPredicted RBP22.99■■□□□ 1.27
CLDND1-220ENST00000508902 PSME4Q14997 1843 aa22.98■■□□□ 1.27
CLDND1-220ENST00000508902 BICC1Q9H694 974 aaKnown RBP22.98■■□□□ 1.27
CLDND1-220ENST00000508902 KIF16BQ96L93 1317 aa22.98■■□□□ 1.27
CLDND1-220ENST00000508902 CEP350Q5VT06 3117 aa22.97■■□□□ 1.27
CLDND1-220ENST00000508902 TRIM27P14373 513 aa22.97■■□□□ 1.27
CLDND1-220ENST00000508902 RABL6Q3YEC7 729 aaPredicted RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms