RNA–Protein interactions for RNA: ENST00000508855.5

CCNH-206, Transcript of cyclin H, human

TSL 1 (best) BASIC

Gene CCNH, Length 2,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNH-206	ENST00000508855	SSH2	Q76I76	1423 aa		4.9	□□□□□ -1.62
CCNH-206	ENST00000508855	DLG5	Q8TDM6	1919 aa		4.9	□□□□□ -1.62
CCNH-206	ENST00000508855	MFAP1	P55081	439 aa	Known RBP	4.9	□□□□□ -1.62
CCNH-206	ENST00000508855	RAB3GAP1	Q15042	981 aa		4.9	□□□□□ -1.62
CCNH-206	ENST00000508855	TWISTNB	Q3B726	338 aa	Predicted RBP	4.9	□□□□□ -1.62
CCNH-206	ENST00000508855	ESF1	Q9H501	851 aa	Known RBP	4.9	□□□□□ -1.62
CCNH-206	ENST00000508855	DCTPP1	Q9H773	170 aa		4.9	□□□□□ -1.62
CCNH-206	ENST00000508855	CABP1	Q9NZU7	370 aa		4.9	□□□□□ -1.62
CCNH-206	ENST00000508855	PXDNL	A1KZ92	1463 aa		4.9	□□□□□ -1.62
CCNH-206	ENST00000508855	USP31	Q70CQ4	1352 aa		4.9	□□□□□ -1.63
CCNH-206	ENST00000508855	AOX1	Q06278	1338 aa		4.9	□□□□□ -1.63
CCNH-206	ENST00000508855	RGPD1	P0DJD0	1748 aa		4.9	□□□□□ -1.63
CCNH-206	ENST00000508855		A6NJR5	290 aa		4.9	□□□□□ -1.63
CCNH-206	ENST00000508855	HSP90AA1	P07900	732 aa	Known RBP	4.9	□□□□□ -1.63
CCNH-206	ENST00000508855	MCC	P23508	829 aa		4.9	□□□□□ -1.63
CCNH-206	ENST00000508855	CCT4	P50991	539 aa	Known RBP	4.9	□□□□□ -1.63
CCNH-206	ENST00000508855	PPP1R18	Q6NYC8	613 aa		4.9	□□□□□ -1.63
CCNH-206	ENST00000508855	FNBP4	Q8N3X1	1017 aa	Predicted RBP	4.9	□□□□□ -1.63
CCNH-206	ENST00000508855	CCDC24	Q8N4L8	307 aa		4.9	□□□□□ -1.63
CCNH-206	ENST00000508855	SRCIN1	Q9C0H9	1055 aa		4.9	□□□□□ -1.63
CCNH-206	ENST00000508855	PTPRU	Q92729	1446 aa		4.89	□□□□□ -1.63
CCNH-206	ENST00000508855	RAPGEF3	O95398	923 aa		4.89	□□□□□ -1.63
CCNH-206	ENST00000508855	ADH1B	P00325	375 aa		4.89	□□□□□ -1.63
CCNH-206	ENST00000508855		Q3C1V9	767 aa		4.89	□□□□□ -1.63
CCNH-206	ENST00000508855	ANKRD44	Q8N8A2	993 aa		4.89	□□□□□ -1.63
CCNH-206	ENST00000508855	EPS8L1	Q8TE68	723 aa		4.89	□□□□□ -1.63
CCNH-206	ENST00000508855	TSR2	Q969E8	191 aa	Known RBP	4.89	□□□□□ -1.63
CCNH-206	ENST00000508855	SLC6A16	Q9GZN6	736 aa		4.89	□□□□□ -1.63
CCNH-206	ENST00000508855	SLK	Q9H2G2	1235 aa	Predicted RBP	4.89	□□□□□ -1.63
CCNH-206	ENST00000508855	OSBPL3	Q9H4L5	887 aa		4.89	□□□□□ -1.63
CCNH-206	ENST00000508855	HMX1	Q9NP08	348 aa	Predicted RBP	4.89	□□□□□ -1.63
CCNH-206	ENST00000508855	SNRK	Q9NRH2	765 aa		4.89	□□□□□ -1.63
CCNH-206	ENST00000508855	FMN2	Q9NZ56	1722 aa		4.89	□□□□□ -1.63
CCNH-206	ENST00000508855	PLEKHG1	Q9ULL1	1385 aa		4.89	□□□□□ -1.63
CCNH-206	ENST00000508855	TERF1	P54274	439 aa		4.89	□□□□□ -1.63
CCNH-206	ENST00000508855	ANAPC15	P60006	121 aa		4.89	□□□□□ -1.63
CCNH-206	ENST00000508855	CCDC173	Q0VFZ6	552 aa		4.89	□□□□□ -1.63
CCNH-206	ENST00000508855	GLIPR1L2	Q4G1C9	344 aa		4.89	□□□□□ -1.63
CCNH-206	ENST00000508855	PLA2G2C	Q5R387	149 aa		4.89	□□□□□ -1.63
CCNH-206	ENST00000508855	ANKRD45	Q5TZF3	282 aa		4.89	□□□□□ -1.63
CCNH-206	ENST00000508855	RETREG3	Q86VR2	466 aa		4.89	□□□□□ -1.63
CCNH-206	ENST00000508855	GAS2L2	Q8NHY3	880 aa		4.89	□□□□□ -1.63
CCNH-206	ENST00000508855	TRIM44	Q96DX7	344 aa	Predicted RBP	4.89	□□□□□ -1.63
CCNH-206	ENST00000508855	BCL2L13	Q9BXK5	485 aa		4.89	□□□□□ -1.63
CCNH-206	ENST00000508855	STK26	Q9P289	416 aa		4.89	□□□□□ -1.63
CCNH-206	ENST00000508855	OVOS2	A0A0J9YW53	1432 aa		4.88	□□□□□ -1.63
CCNH-206	ENST00000508855	OVOS2	Q6IE36	1432 aa		4.88	□□□□□ -1.63
CCNH-206	ENST00000508855	ANKAR	Q7Z5J8	1434 aa		4.88	□□□□□ -1.63
CCNH-206	ENST00000508855	UBR1	Q8IWV7	1749 aa		4.88	□□□□□ -1.63
CCNH-206	ENST00000508855	GNAI3	P08754	354 aa		4.88	□□□□□ -1.63
CCNH-206	ENST00000508855	KLHL40	Q2TBA0	621 aa		4.88	□□□□□ -1.63
CCNH-206	ENST00000508855	PROSER2	Q86WR7	435 aa	Predicted RBP	4.88	□□□□□ -1.63
CCNH-206	ENST00000508855	NUDT16	Q96DE0	195 aa	Known RBP	4.88	□□□□□ -1.63
CCNH-206	ENST00000508855	IL17RA	Q96F46	866 aa		4.88	□□□□□ -1.63
CCNH-206	ENST00000508855	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	4.88	□□□□□ -1.63
CCNH-206	ENST00000508855	TNR	Q92752	1358 aa		4.88	□□□□□ -1.63
CCNH-206	ENST00000508855	PLEKHG2	Q9H7P9	1386 aa		4.88	□□□□□ -1.63
CCNH-206	ENST00000508855	RNF223	E7ERA6	249 aa		4.87	□□□□□ -1.63
CCNH-206	ENST00000508855	CHL1	O00533	1208 aa		4.87	□□□□□ -1.63
CCNH-206	ENST00000508855	MCM5	P33992	734 aa		4.87	□□□□□ -1.63
CCNH-206	ENST00000508855	TTC22	Q5TAA0	569 aa		4.87	□□□□□ -1.63
CCNH-206	ENST00000508855	SYAP1	Q96A49	352 aa	Predicted RBP	4.87	□□□□□ -1.63
CCNH-206	ENST00000508855	GRPEL1	Q9HAV7	217 aa		4.87	□□□□□ -1.63
CCNH-206	ENST00000508855	MBIP	Q9NS73	344 aa		4.87	□□□□□ -1.63
CCNH-206	ENST00000508855	MAP10	Q9P2G4	905 aa		4.87	□□□□□ -1.63
CCNH-206	ENST00000508855	FCF1	Q9Y324	198 aa	Known RBP	4.87	□□□□□ -1.63
CCNH-206	ENST00000508855	SBNO1	A3KN83	1393 aa		4.87	□□□□□ -1.63
CCNH-206	ENST00000508855	MSH6	P52701	1360 aa		4.87	□□□□□ -1.63
CCNH-206	ENST00000508855	ADGRL3	Q9HAR2	1447 aa		4.87	□□□□□ -1.63
CCNH-206	ENST00000508855	LRRC37A3	O60309	1634 aa		4.87	□□□□□ -1.63
CCNH-206	ENST00000508855	MBD3	O95983	291 aa		4.87	□□□□□ -1.63
CCNH-206	ENST00000508855	PRPF38B	Q5VTL8	546 aa	Known RBP	4.87	□□□□□ -1.63
CCNH-206	ENST00000508855	GPAT2	Q6NUI2	795 aa		4.87	□□□□□ -1.63
CCNH-206	ENST00000508855	FLT4	P35916	1363 aa		4.87	□□□□□ -1.63
CCNH-206	ENST00000508855	TMEM2	Q9UHN6	1383 aa		4.87	□□□□□ -1.63
CCNH-206	ENST00000508855	LMTK3	Q96Q04	1460 aa		4.87	□□□□□ -1.63
CCNH-206	ENST00000508855	USP6	P35125	1406 aa		4.87	□□□□□ -1.63
CCNH-206	ENST00000508855	SLIT1	O75093	1534 aa		4.87	□□□□□ -1.63
CCNH-206	ENST00000508855	HOXB7	P09629	217 aa		4.86	□□□□□ -1.63
CCNH-206	ENST00000508855	USP17L8	P0C7I0	530 aa		4.86	□□□□□ -1.63
CCNH-206	ENST00000508855	GJA5	P36382	358 aa		4.86	□□□□□ -1.63
CCNH-206	ENST00000508855	GGCX	P38435	758 aa		4.86	□□□□□ -1.63
CCNH-206	ENST00000508855	PTCRA	Q6ISU1	281 aa	Predicted RBP	4.86	□□□□□ -1.63
CCNH-206	ENST00000508855	TBC1D9	Q6ZT07	1266 aa		4.86	□□□□□ -1.63
CCNH-206	ENST00000508855	SKAP1	Q86WV1	359 aa		4.86	□□□□□ -1.63
CCNH-206	ENST00000508855	NPAS3	Q8IXF0	933 aa		4.86	□□□□□ -1.63
CCNH-206	ENST00000508855	RTF1	Q92541	710 aa	Known RBP	4.86	□□□□□ -1.63
CCNH-206	ENST00000508855	INTS4	Q96HW7	963 aa	Known RBP	4.86	□□□□□ -1.63
CCNH-206	ENST00000508855	LNPK	Q9C0E8	428 aa		4.86	□□□□□ -1.63
CCNH-206	ENST00000508855	KDR	P35968	1356 aa		4.86	□□□□□ -1.63
CCNH-206	ENST00000508855	FAM187A	A6NFU0	413 aa		4.86	□□□□□ -1.63
CCNH-206	ENST00000508855	ERC2	O15083	957 aa		4.86	□□□□□ -1.63
CCNH-206	ENST00000508855	RAB11FIP3	O75154	756 aa		4.86	□□□□□ -1.63
CCNH-206	ENST00000508855	LETM1	O95202	739 aa	Predicted RBP	4.86	□□□□□ -1.63
CCNH-206	ENST00000508855	TPM2	P07951	284 aa		4.86	□□□□□ -1.63
CCNH-206	ENST00000508855	CTH	P32929	405 aa		4.86	□□□□□ -1.63
CCNH-206	ENST00000508855	ZNF445	P59923	1031 aa		4.86	□□□□□ -1.63
CCNH-206	ENST00000508855	HSP90AB4P	Q58FF6	505 aa		4.86	□□□□□ -1.63
CCNH-206	ENST00000508855	PPP2R2D	Q66LE6	453 aa		4.86	□□□□□ -1.63
CCNH-206	ENST00000508855	PLEKHM2	Q8IWE5	1019 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 12 ms