RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 PSMD1Q99460 953 aa13.46□□□□□ -0.25
POLR2J3-213ENST00000508848 UTYO14607 1347 aa13.45□□□□□ -0.26
POLR2J3-213ENST00000508848 C21orf2O43822 256 aa13.45□□□□□ -0.26
POLR2J3-213ENST00000508848 HOXD11P31277 338 aaPredicted RBP13.45□□□□□ -0.26
POLR2J3-213ENST00000508848 GRAPQ13588 217 aa13.45□□□□□ -0.26
POLR2J3-213ENST00000508848 GRAPLQ8TC17 118 aaPredicted RBP13.45□□□□□ -0.26
POLR2J3-213ENST00000508848 ATP6V0A2Q9Y487 856 aa13.45□□□□□ -0.26
POLR2J3-213ENST00000508848 SNED1Q8TER0 1413 aa13.45□□□□□ -0.26
POLR2J3-213ENST00000508848 NFKBIEO00221 500 aa13.44□□□□□ -0.26
POLR2J3-213ENST00000508848 IPO8O15397 1037 aaKnown RBP13.44□□□□□ -0.26
POLR2J3-213ENST00000508848 CSF1RP07333 972 aa13.44□□□□□ -0.26
POLR2J3-213ENST00000508848 CWF19L2Q2TBE0 894 aaKnown RBP13.44□□□□□ -0.26
POLR2J3-213ENST00000508848 CCDC152Q4G0S7 254 aa13.44□□□□□ -0.26
POLR2J3-213ENST00000508848 C3orf67Q6ZVT6 689 aa13.44□□□□□ -0.26
POLR2J3-213ENST00000508848 SRCIN1Q9C0H9 1055 aa13.44□□□□□ -0.26
POLR2J3-213ENST00000508848 TMX4Q9H1E5 349 aaPredicted RBP13.44□□□□□ -0.26
POLR2J3-213ENST00000508848 SMC4Q9NTJ3 1288 aa13.44□□□□□ -0.26
POLR2J3-213ENST00000508848 KIF16BQ96L93 1317 aa13.43□□□□□ -0.26
POLR2J3-213ENST00000508848 RPS8P62241 208 aaKnown RBP13.43□□□□□ -0.26
POLR2J3-213ENST00000508848 FKBP4Q02790 459 aaKnown RBP eCLIP13.43□□□□□ -0.26
POLR2J3-213ENST00000508848 TTLL11Q8NHH1 800 aa13.43□□□□□ -0.26
POLR2J3-213ENST00000508848 RTFDC1Q9BY42 306 aaPredicted RBP13.43□□□□□ -0.26
POLR2J3-213ENST00000508848 API5Q9BZZ5 524 aaKnown RBP13.43□□□□□ -0.26
POLR2J3-213ENST00000508848 ABCC4O15439 1325 aa13.42□□□□□ -0.26
POLR2J3-213ENST00000508848 F6X3S4 739 aa13.42□□□□□ -0.26
POLR2J3-213ENST00000508848 GRM8O00222 908 aa13.42□□□□□ -0.26
POLR2J3-213ENST00000508848 CTSWP56202 376 aa13.42□□□□□ -0.26
POLR2J3-213ENST00000508848 TAOK3Q9H2K8 898 aa13.42□□□□□ -0.26
POLR2J3-213ENST00000508848 HDAC5Q9UQL6 1122 aa13.42□□□□□ -0.26
POLR2J3-213ENST00000508848 TAF1P21675 1872 aa13.42□□□□□ -0.26
POLR2J3-213ENST00000508848 LRRC37AA6NMS7 1700 aa13.42□□□□□ -0.26
POLR2J3-213ENST00000508848 PPEF1O14829 653 aaPredicted RBP13.41□□□□□ -0.26
POLR2J3-213ENST00000508848 CCT4P50991 539 aaKnown RBP13.41□□□□□ -0.26
POLR2J3-213ENST00000508848 C9orf131Q5VYM1 1079 aa13.41□□□□□ -0.26
POLR2J3-213ENST00000508848 UBE3BQ7Z3V4 1068 aa13.41□□□□□ -0.26
POLR2J3-213ENST00000508848 SUPT20HQ8NEM7 779 aa13.4□□□□□ -0.26
POLR2J3-213ENST00000508848 CDC5LQ99459 802 aaKnown RBP13.4□□□□□ -0.26
POLR2J3-213ENST00000508848 PODXL2Q9NZ53 605 aa13.4□□□□□ -0.26
POLR2J3-213ENST00000508848 C9orf78Q9NZ63 289 aaPredicted RBP13.4□□□□□ -0.26
POLR2J3-213ENST00000508848 WWC3Q9ULE0 1092 aa13.4□□□□□ -0.26
POLR2J3-213ENST00000508848 NOB1Q9ULX3 412 aaKnown RBP13.4□□□□□ -0.26
POLR2J3-213ENST00000508848 INTS3Q68E01 1043 aaKnown RBP13.39□□□□□ -0.27
POLR2J3-213ENST00000508848 ZNF784Q8NCA9 323 aaPredicted RBP13.39□□□□□ -0.27
POLR2J3-213ENST00000508848 USP44Q9H0E7 712 aa13.39□□□□□ -0.27
POLR2J3-213ENST00000508848 BSDC1Q9NW68 430 aaPredicted RBP13.39□□□□□ -0.27
POLR2J3-213ENST00000508848 RNF181Q9P0P0 153 aa13.39□□□□□ -0.27
POLR2J3-213ENST00000508848 PRELPP51888 382 aa13.38□□□□□ -0.27
POLR2J3-213ENST00000508848 FOXO4P98177 505 aa13.38□□□□□ -0.27
POLR2J3-213ENST00000508848 RTL5Q5HYW3 569 aaPredicted RBP13.38□□□□□ -0.27
POLR2J3-213ENST00000508848 SLC4A10Q6U841 1118 aa13.38□□□□□ -0.27
POLR2J3-213ENST00000508848 MPNDQ8N594 471 aa13.38□□□□□ -0.27
POLR2J3-213ENST00000508848 RABL6Q3YEC7 729 aaPredicted RBP13.37□□□□□ -0.27
POLR2J3-213ENST00000508848 DPY19L2Q6NUT2 758 aa13.37□□□□□ -0.27
POLR2J3-213ENST00000508848 ATF7IPQ6VMQ6 1270 aa13.37□□□□□ -0.27
POLR2J3-213ENST00000508848 ANKRD18AQ8IVF6 992 aa13.37□□□□□ -0.27
POLR2J3-213ENST00000508848 CELF1Q92879 486 aaKnown RBP13.37□□□□□ -0.27
POLR2J3-213ENST00000508848 KDM2BQ8NHM5 1336 aa13.37□□□□□ -0.27
POLR2J3-213ENST00000508848 GLTPD2A6NH11 291 aa13.36□□□□□ -0.27
POLR2J3-213ENST00000508848 IARSP41252 1262 aaKnown RBP13.36□□□□□ -0.27
POLR2J3-213ENST00000508848 BCL2L13Q9BXK5 485 aa13.36□□□□□ -0.27
POLR2J3-213ENST00000508848 LTBP1Q14766 1721 aa13.36□□□□□ -0.27
POLR2J3-213ENST00000508848 FZD9O00144 591 aa13.35□□□□□ -0.27
POLR2J3-213ENST00000508848 NBPF7P0C2Y1 421 aaPredicted RBP13.35□□□□□ -0.27
POLR2J3-213ENST00000508848 RASSF7Q02833 373 aa13.35□□□□□ -0.27
POLR2J3-213ENST00000508848 DPP8Q6V1X1 898 aaPredicted RBP13.35□□□□□ -0.27
POLR2J3-213ENST00000508848 JARID2Q92833 1246 aaPredicted RBP13.35□□□□□ -0.27
POLR2J3-213ENST00000508848 KAZALD1Q96I82 304 aa13.35□□□□□ -0.27
POLR2J3-213ENST00000508848 GREM2Q9H772 168 aa13.35□□□□□ -0.27
POLR2J3-213ENST00000508848 SEC31BQ9NQW1 1179 aa13.35□□□□□ -0.27
POLR2J3-213ENST00000508848 ANKRD18BA2A2Z9 1011 aa13.34□□□□□ -0.27
POLR2J3-213ENST00000508848 BCAR3O75815 825 aa13.34□□□□□ -0.27
POLR2J3-213ENST00000508848 MS4A1P11836 297 aa13.34□□□□□ -0.27
POLR2J3-213ENST00000508848 TRIM27P14373 513 aa13.34□□□□□ -0.27
POLR2J3-213ENST00000508848 ITGA6P23229 1130 aa13.34□□□□□ -0.27
POLR2J3-213ENST00000508848 KIAA2012Q0VF49 1180 aa13.34□□□□□ -0.27
POLR2J3-213ENST00000508848 IFIT5Q13325 482 aaKnown RBP13.34□□□□□ -0.27
POLR2J3-213ENST00000508848 ZKSCAN2Q63HK3 967 aa13.34□□□□□ -0.27
POLR2J3-213ENST00000508848 JDP2Q8WYK2 163 aa13.34□□□□□ -0.27
POLR2J3-213ENST00000508848 ZNF219Q9P2Y4 722 aaPredicted RBP13.34□□□□□ -0.27
POLR2J3-213ENST00000508848 TIAM2Q8IVF5 1701 aa13.33□□□□□ -0.27
POLR2J3-213ENST00000508848 GNAI3P08754 354 aa13.33□□□□□ -0.28
POLR2J3-213ENST00000508848 IGHMBP2P38935 993 aaKnown RBP13.33□□□□□ -0.28
POLR2J3-213ENST00000508848 LMBR1LQ6UX01 489 aa13.33□□□□□ -0.28
POLR2J3-213ENST00000508848 OLFM4Q6UX06 510 aa13.33□□□□□ -0.28
POLR2J3-213ENST00000508848 ANKRD2Q9GZV1 360 aa13.33□□□□□ -0.28
POLR2J3-213ENST00000508848 ZNF277Q9NRM2 450 aaPredicted RBP13.33□□□□□ -0.28
POLR2J3-213ENST00000508848 FBXO3Q9UK99 471 aa13.33□□□□□ -0.28
POLR2J3-213ENST00000508848 MINPP1Q9UNW1 487 aa13.33□□□□□ -0.28
POLR2J3-213ENST00000508848 LEMD3Q9Y2U8 911 aa13.33□□□□□ -0.28
POLR2J3-213ENST00000508848 XDHP47989 1333 aa13.33□□□□□ -0.28
POLR2J3-213ENST00000508848 SCN4AP35499 1836 aa13.32□□□□□ -0.28
POLR2J3-213ENST00000508848 ATP2B4P23634 1241 aa13.32□□□□□ -0.28
POLR2J3-213ENST00000508848 CCDC57Q2TAC2 916 aa13.32□□□□□ -0.28
POLR2J3-213ENST00000508848 EPHA10Q5JZY3 1008 aa13.32□□□□□ -0.28
POLR2J3-213ENST00000508848 L3MBTL3Q96JM7 780 aaPredicted RBP13.32□□□□□ -0.28
POLR2J3-213ENST00000508848 EYA3Q99504 573 aa13.32□□□□□ -0.28
POLR2J3-213ENST00000508848 GPBP1L1Q9HC44 474 aaPredicted RBP13.32□□□□□ -0.28
POLR2J3-213ENST00000508848 NSFL1CQ9UNZ2 370 aaKnown RBP13.32□□□□□ -0.28
POLR2J3-213ENST00000508848 WDR90Q96KV7 1748 aa13.32□□□□□ -0.28
POLR2J3-213ENST00000508848 WASHC4Q2M389 1173 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms