RNA–Protein interactions for RNA: ENST00000507902.5

PTPN13-206, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 4

Gene PTPN13, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-206ENST00000507902 GRAPLQ8TC17 118 aaPredicted RBP17.57■□□□□ 0.4
PTPN13-206ENST00000507902 TIAM2Q8IVF5 1701 aa17.56■□□□□ 0.4
PTPN13-206ENST00000507902 F6X3S4 739 aa17.56■□□□□ 0.4
PTPN13-206ENST00000507902 BRPF1P55201 1214 aaPredicted RBP17.56■□□□□ 0.4
PTPN13-206ENST00000507902 FKBP4Q02790 459 aaKnown RBP eCLIP17.56■□□□□ 0.4
PTPN13-206ENST00000507902 BEND3Q5T5X7 828 aa17.56■□□□□ 0.4
PTPN13-206ENST00000507902 SLC4A10Q6U841 1118 aa17.56■□□□□ 0.4
PTPN13-206ENST00000507902 UBE3BQ7Z3V4 1068 aa17.56■□□□□ 0.4
PTPN13-206ENST00000507902 SRCIN1Q9C0H9 1055 aa17.56■□□□□ 0.4
PTPN13-206ENST00000507902 ATP6V0A2Q9Y487 856 aa17.56■□□□□ 0.4
PTPN13-206ENST00000507902 H7C1W4 665 aa17.55■□□□□ 0.4
PTPN13-206ENST00000507902 CTSWP56202 376 aa17.55■□□□□ 0.4
PTPN13-206ENST00000507902 PSMD1Q99460 953 aa17.55■□□□□ 0.4
PTPN13-206ENST00000507902 BCL2L13Q9BXK5 485 aa17.55■□□□□ 0.4
PTPN13-206ENST00000507902 DICER1Q9UPY3 1922 aaKnown RBP17.54■□□□□ 0.4
PTPN13-206ENST00000507902 RTL9Q8NET4 1388 aa17.53■□□□□ 0.4
PTPN13-206ENST00000507902 KDM2BQ8NHM5 1336 aa17.53■□□□□ 0.4
PTPN13-206ENST00000507902 LRRC37AA6NMS7 1700 aa17.53■□□□□ 0.4
PTPN13-206ENST00000507902 GRM8O00222 908 aa17.53■□□□□ 0.4
PTPN13-206ENST00000507902 SP8Q8IXZ3 490 aa17.53■□□□□ 0.4
PTPN13-206ENST00000507902 SUPT20HQ8NEM7 779 aa17.53■□□□□ 0.4
PTPN13-206ENST00000507902 CDC5LQ99459 802 aaKnown RBP17.53■□□□□ 0.4
PTPN13-206ENST00000507902 PLA2G12BQ9BX93 195 aa17.53■□□□□ 0.4
PTPN13-206ENST00000507902 API5Q9BZZ5 524 aaKnown RBP17.53■□□□□ 0.4
PTPN13-206ENST00000507902 GPBP1L1Q9HC44 474 aaPredicted RBP17.53■□□□□ 0.4
PTPN13-206ENST00000507902 C9orf78Q9NZ63 289 aaPredicted RBP17.53■□□□□ 0.4
PTPN13-206ENST00000507902 CCDC88AQ3V6T2 1871 aa17.52■□□□□ 0.4
PTPN13-206ENST00000507902 RARSP54136 660 aaKnown RBP17.52■□□□□ 0.4
PTPN13-206ENST00000507902 SNED1Q8TER0 1413 aa17.52■□□□□ 0.4
PTPN13-206ENST00000507902 IPO8O15397 1037 aaKnown RBP17.51■□□□□ 0.39
PTPN13-206ENST00000507902 VPS33BQ9H267 617 aa17.51■□□□□ 0.39
PTPN13-206ENST00000507902 CCT4P50991 539 aaKnown RBP17.5■□□□□ 0.39
PTPN13-206ENST00000507902 RPS8P62241 208 aaKnown RBP17.5■□□□□ 0.39
PTPN13-206ENST00000507902 DPP8Q6V1X1 898 aaPredicted RBP17.5■□□□□ 0.39
PTPN13-206ENST00000507902 ANKRD18AQ8IVF6 992 aa17.5■□□□□ 0.39
PTPN13-206ENST00000507902 TTLL11Q8NHH1 800 aa17.5■□□□□ 0.39
PTPN13-206ENST00000507902 ARHGAP45Q92619 1136 aa17.5■□□□□ 0.39
PTPN13-206ENST00000507902 JARID2Q92833 1246 aaPredicted RBP17.5■□□□□ 0.39
PTPN13-206ENST00000507902 IARSP41252 1262 aaKnown RBP17.49■□□□□ 0.39
PTPN13-206ENST00000507902 DPY19L2Q6NUT2 758 aa17.49■□□□□ 0.39
PTPN13-206ENST00000507902 OLFM4Q6UX06 510 aa17.49■□□□□ 0.39
PTPN13-206ENST00000507902 MPNDQ8N594 471 aa17.49■□□□□ 0.39
PTPN13-206ENST00000507902 JDP2Q8WYK2 163 aa17.49■□□□□ 0.39
PTPN13-206ENST00000507902 CELF1Q92879 486 aaKnown RBP17.49■□□□□ 0.39
PTPN13-206ENST00000507902 CASP7P55210 303 aa17.48■□□□□ 0.39
PTPN13-206ENST00000507902 ZNF277Q9NRM2 450 aaPredicted RBP17.48■□□□□ 0.39
PTPN13-206ENST00000507902 NOB1Q9ULX3 412 aaKnown RBP17.48■□□□□ 0.39
PTPN13-206ENST00000507902 HDAC5Q9UQL6 1122 aa17.48■□□□□ 0.39
PTPN13-206ENST00000507902 TAF1P21675 1872 aa17.48■□□□□ 0.39
PTPN13-206ENST00000507902 IGHMBP2P38935 993 aaKnown RBP17.47■□□□□ 0.39
PTPN13-206ENST00000507902 ZNF526Q8TF50 670 aaPredicted RBP17.47■□□□□ 0.39
PTPN13-206ENST00000507902 RTFDC1Q9BY42 306 aaPredicted RBP17.47■□□□□ 0.39
PTPN13-206ENST00000507902 UTYO14607 1347 aa17.47■□□□□ 0.39
PTPN13-206ENST00000507902 PRELPP51888 382 aa17.46■□□□□ 0.39
PTPN13-206ENST00000507902 CCDC85AQ96PX6 553 aaPredicted RBP17.46■□□□□ 0.39
PTPN13-206ENST00000507902 GREM2Q9H772 168 aa17.46■□□□□ 0.39
PTPN13-206ENST00000507902 SEC31BQ9NQW1 1179 aa17.46■□□□□ 0.39
PTPN13-206ENST00000507902 ANKRD18BA2A2Z9 1011 aa17.45■□□□□ 0.38
PTPN13-206ENST00000507902 GLTPD2A6NH11 291 aa17.45■□□□□ 0.38
PTPN13-206ENST00000507902 PPIP5K2O43314 1243 aa17.45■□□□□ 0.38
PTPN13-206ENST00000507902 CSF1RP07333 972 aa17.45■□□□□ 0.38
PTPN13-206ENST00000507902 IFIT5Q13325 482 aaKnown RBP17.45■□□□□ 0.38
PTPN13-206ENST00000507902 LARGE2Q8N3Y3 721 aa17.45■□□□□ 0.38
PTPN13-206ENST00000507902 EYA3Q99504 573 aa17.45■□□□□ 0.38
PTPN13-206ENST00000507902 NSFL1CQ9UNZ2 370 aaKnown RBP17.45■□□□□ 0.38
PTPN13-206ENST00000507902 ITGA6P23229 1130 aa17.44■□□□□ 0.38
PTPN13-206ENST00000507902 FAM161AQ3B820 660 aa17.44■□□□□ 0.38
PTPN13-206ENST00000507902 NIM1KQ8IY84 436 aa17.44■□□□□ 0.38
PTPN13-206ENST00000507902 MPHOSPH8Q99549 860 aa17.44■□□□□ 0.38
PTPN13-206ENST00000507902 BSDC1Q9NW68 430 aaPredicted RBP17.44■□□□□ 0.38
PTPN13-206ENST00000507902 ANKIB1Q9P2G1 1089 aa17.44■□□□□ 0.38
PTPN13-206ENST00000507902 CHMP3Q9Y3E7 222 aa17.44■□□□□ 0.38
PTPN13-206ENST00000507902 CCDC57Q2TAC2 916 aa17.43■□□□□ 0.38
PTPN13-206ENST00000507902 ATF7IPQ6VMQ6 1270 aa17.43■□□□□ 0.38
PTPN13-206ENST00000507902 FRAT1Q92837 279 aaPredicted RBP17.43■□□□□ 0.38
PTPN13-206ENST00000507902 PODXL2Q9NZ53 605 aa17.43■□□□□ 0.38
PTPN13-206ENST00000507902 LTBP1Q14766 1721 aa17.43■□□□□ 0.38
PTPN13-206ENST00000507902 XDHP47989 1333 aa17.43■□□□□ 0.38
PTPN13-206ENST00000507902 SPEF2Q9C093 1822 aa17.42■□□□□ 0.38
PTPN13-206ENST00000507902 DUOX1Q9NRD9 1551 aa17.42■□□□□ 0.38
PTPN13-206ENST00000507902 NBPF7P0C2Y1 421 aaPredicted RBP17.42■□□□□ 0.38
PTPN13-206ENST00000507902 EIF6P56537 245 aaKnown RBP17.42■□□□□ 0.38
PTPN13-206ENST00000507902 FOXO4P98177 505 aa17.42■□□□□ 0.38
PTPN13-206ENST00000507902 KIAA2012Q0VF49 1180 aa17.42■□□□□ 0.38
PTPN13-206ENST00000507902 TAF7LQ5H9L4 462 aa17.42■□□□□ 0.38
PTPN13-206ENST00000507902 ZKSCAN2Q63HK3 967 aa17.42■□□□□ 0.38
PTPN13-206ENST00000507902 C6orf229H3BNL8 230 aa17.41■□□□□ 0.38
PTPN13-206ENST00000507902 FZD9O00144 591 aa17.41■□□□□ 0.38
PTPN13-206ENST00000507902 BCAR3O75815 825 aa17.41■□□□□ 0.38
PTPN13-206ENST00000507902 AOC3Q16853 763 aa17.41■□□□□ 0.38
PTPN13-206ENST00000507902 WASHC4Q2M389 1173 aa17.41■□□□□ 0.38
PTPN13-206ENST00000507902 LMBR1LQ6UX01 489 aa17.41■□□□□ 0.38
PTPN13-206ENST00000507902 C16orf71Q8IYS4 520 aaPredicted RBP17.41■□□□□ 0.38
PTPN13-206ENST00000507902 GGA1Q9UJY5 639 aa17.41■□□□□ 0.38
PTPN13-206ENST00000507902 COL4A1P02462 1669 aa17.41■□□□□ 0.38
PTPN13-206ENST00000507902 WDR90Q96KV7 1748 aa17.41■□□□□ 0.38
PTPN13-206ENST00000507902 IQCA1LA6NCM1 817 aa17.4■□□□□ 0.38
PTPN13-206ENST00000507902 UBTFL1P0CB47 393 aaPredicted RBP17.4■□□□□ 0.38
PTPN13-206ENST00000507902 TRIM27P14373 513 aa17.4■□□□□ 0.38
PTPN13-206ENST00000507902 GPSM2P81274 684 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms