RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 GRAPLQ8TC17 118 aaPredicted RBP18.94■□□□□ 0.62
SEC24D-208ENST00000506622 CFAP44Q96MT7 982 aa18.94■□□□□ 0.62
SEC24D-208ENST00000506622 TAF1P21675 1872 aa18.93■□□□□ 0.62
SEC24D-208ENST00000506622 FOXN1O15353 648 aa18.93■□□□□ 0.62
SEC24D-208ENST00000506622 CXCL9Q07325 125 aa18.93■□□□□ 0.62
SEC24D-208ENST00000506622 TMC4Q7Z404 712 aa18.93■□□□□ 0.62
SEC24D-208ENST00000506622 ZNF428Q96B54 188 aa18.93■□□□□ 0.62
SEC24D-208ENST00000506622 ADARB2Q9NS39 739 aaKnown RBP18.93■□□□□ 0.62
SEC24D-208ENST00000506622 HYPKQ9NX55 129 aa18.93■□□□□ 0.62
SEC24D-208ENST00000506622 GPRC5DQ9NZD1 345 aa18.93■□□□□ 0.62
SEC24D-208ENST00000506622 KIAA2012Q0VF49 1180 aa18.92■□□□□ 0.62
SEC24D-208ENST00000506622 CTCFP49711 727 aaPredicted RBP18.91■□□□□ 0.62
SEC24D-208ENST00000506622 TNIP1Q15025 636 aa18.91■□□□□ 0.62
SEC24D-208ENST00000506622 DUSP27Q5VZP5 1158 aa18.91■□□□□ 0.62
SEC24D-208ENST00000506622 CIAPIN1Q6FI81 312 aa18.91■□□□□ 0.62
SEC24D-208ENST00000506622 FAM89AQ96GI7 184 aa18.91■□□□□ 0.62
SEC24D-208ENST00000506622 TRPM7Q96QT4 1865 aa18.9■□□□□ 0.62
SEC24D-208ENST00000506622 ATP5J2-PTCD1G3V325 749 aa18.9■□□□□ 0.62
SEC24D-208ENST00000506622 GMPSP49915 693 aaPredicted RBP18.9■□□□□ 0.62
SEC24D-208ENST00000506622 ISCA1Q9BUE6 129 aa18.9■□□□□ 0.62
SEC24D-208ENST00000506622 BCL2L13Q9BXK5 485 aa18.9■□□□□ 0.62
SEC24D-208ENST00000506622 PRDM10Q9NQV6 1147 aa18.9■□□□□ 0.62
SEC24D-208ENST00000506622 WBP1LQ9NX94 342 aa18.9■□□□□ 0.62
SEC24D-208ENST00000506622 WDR33Q9C0J8 1336 aaKnown RBP18.89■□□□□ 0.61
SEC24D-208ENST00000506622 PRKRIP1Q9H875 184 aaPredicted RBP18.89■□□□□ 0.61
SEC24D-208ENST00000506622 MBIPQ9NS73 344 aa18.89■□□□□ 0.61
SEC24D-208ENST00000506622 RAD17O75943 681 aa18.88■□□□□ 0.61
SEC24D-208ENST00000506622 MAP2K1Q02750 393 aaPredicted RBP18.88■□□□□ 0.61
SEC24D-208ENST00000506622 CALD1Q05682 793 aaKnown RBP18.88■□□□□ 0.61
SEC24D-208ENST00000506622 FMR1Q06787 632 aaKnown RBP eCLIP18.88■□□□□ 0.61
SEC24D-208ENST00000506622 SF3B3Q15393 1217 aaKnown RBP18.88■□□□□ 0.61
SEC24D-208ENST00000506622 PAXIP1Q6ZW49 1069 aaPredicted RBP18.88■□□□□ 0.61
SEC24D-208ENST00000506622 DDX60Q8IY21 1712 aaKnown RBP18.88■□□□□ 0.61
SEC24D-208ENST00000506622 CDHR2Q9BYE9 1310 aa18.87■□□□□ 0.61
SEC24D-208ENST00000506622 TRAF5O00463 557 aa18.87■□□□□ 0.61
SEC24D-208ENST00000506622 GNAI1P63096 354 aa18.87■□□□□ 0.61
SEC24D-208ENST00000506622 TRIM28Q13263 835 aaKnown RBP18.87■□□□□ 0.61
SEC24D-208ENST00000506622 RTL5Q5HYW3 569 aaPredicted RBP18.87■□□□□ 0.61
SEC24D-208ENST00000506622 RIC3Q7Z5B4 369 aa18.87■□□□□ 0.61
SEC24D-208ENST00000506622 NSFL1CQ9UNZ2 370 aaKnown RBP18.87■□□□□ 0.61
SEC24D-208ENST00000506622 APAF1O14727 1248 aa18.86■□□□□ 0.61
SEC24D-208ENST00000506622 ECE1P42892 770 aa18.86■□□□□ 0.61
SEC24D-208ENST00000506622 GOLGA2Q08379 1002 aa18.86■□□□□ 0.61
SEC24D-208ENST00000506622 WASHC4Q2M389 1173 aa18.86■□□□□ 0.61
SEC24D-208ENST00000506622 CELF1Q92879 486 aaKnown RBP18.86■□□□□ 0.61
SEC24D-208ENST00000506622 IFT57Q9NWB7 429 aa18.86■□□□□ 0.61
SEC24D-208ENST00000506622 H7C1D1 291 aa18.85■□□□□ 0.61
SEC24D-208ENST00000506622 ELL2O00472 640 aaPredicted RBP18.85■□□□□ 0.61
SEC24D-208ENST00000506622 IRS4O14654 1257 aaPredicted RBP18.85■□□□□ 0.61
SEC24D-208ENST00000506622 ZNF853P0CG23 659 aa18.85■□□□□ 0.61
SEC24D-208ENST00000506622 HSP90B1P14625 803 aaKnown RBP18.85■□□□□ 0.61
SEC24D-208ENST00000506622 CST9Q5W186 159 aa18.85■□□□□ 0.61
SEC24D-208ENST00000506622 CAPNS2Q96L46 248 aa18.85■□□□□ 0.61
SEC24D-208ENST00000506622 CNOT7Q9UIV1 285 aaKnown RBP18.85■□□□□ 0.61
SEC24D-208ENST00000506622 C6orf229H3BNL8 230 aa18.84■□□□□ 0.61
SEC24D-208ENST00000506622 LBX1P52954 281 aa18.84■□□□□ 0.61
SEC24D-208ENST00000506622 GRM1Q13255 1194 aa18.84■□□□□ 0.61
SEC24D-208ENST00000506622 ZC3H15Q8WU90 426 aaKnown RBP18.84■□□□□ 0.61
SEC24D-208ENST00000506622 LRRC37AA6NMS7 1700 aa18.84■□□□□ 0.61
SEC24D-208ENST00000506622 YDJCA8MPS7 323 aa18.83■□□□□ 0.61
SEC24D-208ENST00000506622 RIMBP2O15034 1052 aa18.83■□□□□ 0.61
SEC24D-208ENST00000506622 RPS8P62241 208 aaKnown RBP18.83■□□□□ 0.61
SEC24D-208ENST00000506622 BEGAINQ9BUH8 593 aa18.83■□□□□ 0.61
SEC24D-208ENST00000506622 CHMP4AQ9BY43 222 aa18.83■□□□□ 0.61
SEC24D-208ENST00000506622 PHAXQ9H814 394 aaKnown RBP18.83■□□□□ 0.61
SEC24D-208ENST00000506622 PGAP2Q9UHJ9 254 aa18.83■□□□□ 0.61
SEC24D-208ENST00000506622 TLL2Q9Y6L7 1015 aa18.83■□□□□ 0.61
SEC24D-208ENST00000506622 CELF2O95319 508 aaKnown RBP18.82■□□□□ 0.6
SEC24D-208ENST00000506622 CYP4F22Q6NT55 531 aa18.82■□□□□ 0.6
SEC24D-208ENST00000506622 ZBTB38Q8NAP3 1195 aaPredicted RBP18.82■□□□□ 0.6
SEC24D-208ENST00000506622 GPR101Q96P66 508 aaPredicted RBP18.82■□□□□ 0.6
SEC24D-208ENST00000506622 EYA3Q99504 573 aa18.82■□□□□ 0.6
SEC24D-208ENST00000506622 GLIS2Q9BZE0 524 aaPredicted RBP18.82■□□□□ 0.6
SEC24D-208ENST00000506622 DUOX1Q9NRD9 1551 aa18.82■□□□□ 0.6
SEC24D-208ENST00000506622 HIRAP54198 1017 aaPredicted RBP18.81■□□□□ 0.6
SEC24D-208ENST00000506622 GPSM2P81274 684 aa18.81■□□□□ 0.6
SEC24D-208ENST00000506622 CDC37L1Q7L3B6 337 aa18.81■□□□□ 0.6
SEC24D-208ENST00000506622 MYD88Q99836 296 aa18.81■□□□□ 0.6
SEC24D-208ENST00000506622 DBNDD1Q9H9R9 158 aa18.81■□□□□ 0.6
SEC24D-208ENST00000506622 POLLQ9UGP5 575 aa18.81■□□□□ 0.6
SEC24D-208ENST00000506622 MICALL2Q8IY33 904 aa18.8■□□□□ 0.6
SEC24D-208ENST00000506622 TRPM4Q8TD43 1214 aa18.8■□□□□ 0.6
SEC24D-208ENST00000506622 DPF2Q92785 391 aa18.8■□□□□ 0.6
SEC24D-208ENST00000506622 ZBTB12Q9Y330 459 aaPredicted RBP18.8■□□□□ 0.6
SEC24D-208ENST00000506622 PSMD14O00487 310 aa18.79■□□□□ 0.6
SEC24D-208ENST00000506622 DDX58O95786 925 aaKnown RBP18.79■□□□□ 0.6
SEC24D-208ENST00000506622 HSPA8P11142 646 aaKnown RBP18.79■□□□□ 0.6
SEC24D-208ENST00000506622 CCDC30Q5VVM6 783 aa18.79■□□□□ 0.6
SEC24D-208ENST00000506622 SAPCD2Q86UD0 394 aa18.79■□□□□ 0.6
SEC24D-208ENST00000506622 CCDC191Q8NCU4 936 aa18.79■□□□□ 0.6
SEC24D-208ENST00000506622 TBC1D16Q8TBP0 767 aa18.79■□□□□ 0.6
SEC24D-208ENST00000506622 ZC3H12CQ9C0D7 883 aaKnown RBP18.79■□□□□ 0.6
SEC24D-208ENST00000506622 ZNF408Q9H9D4 720 aa18.79■□□□□ 0.6
SEC24D-208ENST00000506622 POLR2AP24928 1970 aaKnown RBP18.79■□□□□ 0.6
SEC24D-208ENST00000506622 SHTN1A0MZ66 631 aa18.78■□□□□ 0.6
SEC24D-208ENST00000506622 ECE2O60344 883 aa18.78■□□□□ 0.6
SEC24D-208ENST00000506622 MAP2K2P36507 400 aa18.78■□□□□ 0.6
SEC24D-208ENST00000506622 DOK7Q18PE1 504 aa18.78■□□□□ 0.6
SEC24D-208ENST00000506622 CCDC152Q4G0S7 254 aa18.78■□□□□ 0.6
SEC24D-208ENST00000506622 C8orf58Q8NAV2 365 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms