RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 MPNDQ8N594 471 aa15.88■□□□□ 0.13
SNHG4-202ENST00000505522 GRAPLQ8TC17 118 aaPredicted RBP15.88■□□□□ 0.13
SNHG4-202ENST00000505522 VEGFBP49765 207 aa15.87■□□□□ 0.13
SNHG4-202ENST00000505522 CXCL9Q07325 125 aa15.87■□□□□ 0.13
SNHG4-202ENST00000505522 TNS4Q8IZW8 715 aa15.87■□□□□ 0.13
SNHG4-202ENST00000505522 SUPT20HQ8NEM7 779 aa15.87■□□□□ 0.13
SNHG4-202ENST00000505522 FAM89AQ96GI7 184 aa15.87■□□□□ 0.13
SNHG4-202ENST00000505522 HYPKQ9NX55 129 aa15.87■□□□□ 0.13
SNHG4-202ENST00000505522 FMR1Q06787 632 aaKnown RBP eCLIP15.86■□□□□ 0.13
SNHG4-202ENST00000505522 IFT57Q9NWB7 429 aa15.86■□□□□ 0.13
SNHG4-202ENST00000505522 ZNRF3Q9ULT6 936 aa15.86■□□□□ 0.13
SNHG4-202ENST00000505522 DUOX1Q9NRD9 1551 aa15.86■□□□□ 0.13
SNHG4-202ENST00000505522 COL4A1P02462 1669 aa15.86■□□□□ 0.13
SNHG4-202ENST00000505522 LRRC37AA6NMS7 1700 aa15.85■□□□□ 0.13
SNHG4-202ENST00000505522 ELL2O00472 640 aaPredicted RBP15.85■□□□□ 0.13
SNHG4-202ENST00000505522 KIAA2012Q0VF49 1180 aa15.85■□□□□ 0.13
SNHG4-202ENST00000505522 RTL5Q5HYW3 569 aaPredicted RBP15.85■□□□□ 0.13
SNHG4-202ENST00000505522 USP50Q70EL3 339 aaPredicted RBP15.85■□□□□ 0.13
SNHG4-202ENST00000505522 PHAXQ9H814 394 aaKnown RBP15.85■□□□□ 0.13
SNHG4-202ENST00000505522 GPRC5DQ9NZD1 345 aa15.85■□□□□ 0.13
SNHG4-202ENST00000505522 RASSF10A6NK89 507 aa15.84■□□□□ 0.13
SNHG4-202ENST00000505522 GMPSP49915 693 aaPredicted RBP15.84■□□□□ 0.13
SNHG4-202ENST00000505522 GNAI1P63096 354 aa15.84■□□□□ 0.13
SNHG4-202ENST00000505522 SF3B3Q15393 1217 aaKnown RBP15.84■□□□□ 0.13
SNHG4-202ENST00000505522 CELF1Q92879 486 aaKnown RBP15.84■□□□□ 0.13
SNHG4-202ENST00000505522 FOXN1O15353 648 aa15.83■□□□□ 0.12
SNHG4-202ENST00000505522 RAD17O75943 681 aa15.83■□□□□ 0.12
SNHG4-202ENST00000505522 TRIM28Q13263 835 aaKnown RBP15.83■□□□□ 0.12
SNHG4-202ENST00000505522 CIAPIN1Q6FI81 312 aa15.83■□□□□ 0.12
SNHG4-202ENST00000505522 TMC4Q7Z404 712 aa15.83■□□□□ 0.12
SNHG4-202ENST00000505522 C8orf58Q8NAV2 365 aa15.83■□□□□ 0.12
SNHG4-202ENST00000505522 ADARB2Q9NS39 739 aaKnown RBP15.83■□□□□ 0.12
SNHG4-202ENST00000505522 YDJCA8MPS7 323 aa15.82■□□□□ 0.12
SNHG4-202ENST00000505522 TRAF5O00463 557 aa15.82■□□□□ 0.12
SNHG4-202ENST00000505522 IRS4O14654 1257 aaPredicted RBP15.82■□□□□ 0.12
SNHG4-202ENST00000505522 CAPN15O75808 1086 aa15.82■□□□□ 0.12
SNHG4-202ENST00000505522 CALD1Q05682 793 aaKnown RBP15.82■□□□□ 0.12
SNHG4-202ENST00000505522 DEFB115Q30KQ5 88 aa15.82■□□□□ 0.12
SNHG4-202ENST00000505522 CCDC184Q52MB2 194 aa15.82■□□□□ 0.12
SNHG4-202ENST00000505522 RIC3Q7Z5B4 369 aa15.82■□□□□ 0.12
SNHG4-202ENST00000505522 GOLGA2Q08379 1002 aa15.81■□□□□ 0.12
SNHG4-202ENST00000505522 ABT1Q9ULW3 272 aaKnown RBP15.81■□□□□ 0.12
SNHG4-202ENST00000505522 NSFL1CQ9UNZ2 370 aaKnown RBP15.81■□□□□ 0.12
SNHG4-202ENST00000505522 WDR33Q9C0J8 1336 aaKnown RBP15.8■□□□□ 0.12
SNHG4-202ENST00000505522 GPSM2P81274 684 aa15.8■□□□□ 0.12
SNHG4-202ENST00000505522 TNIP1Q15025 636 aa15.8■□□□□ 0.12
SNHG4-202ENST00000505522 CST9Q5W186 159 aa15.8■□□□□ 0.12
SNHG4-202ENST00000505522 MYD88Q99836 296 aa15.8■□□□□ 0.12
SNHG4-202ENST00000505522 BCL2L13Q9BXK5 485 aa15.8■□□□□ 0.12
SNHG4-202ENST00000505522 POLLQ9UGP5 575 aa15.8■□□□□ 0.12
SNHG4-202ENST00000505522 CDHR2Q9BYE9 1310 aa15.79■□□□□ 0.12
SNHG4-202ENST00000505522 SHTN1A0MZ66 631 aa15.79■□□□□ 0.12
SNHG4-202ENST00000505522 RIMBP2O15034 1052 aa15.79■□□□□ 0.12
SNHG4-202ENST00000505522 HIRAP54198 1017 aaPredicted RBP15.79■□□□□ 0.12
SNHG4-202ENST00000505522 WASHC4Q2M389 1173 aa15.79■□□□□ 0.12
SNHG4-202ENST00000505522 TSPYL6Q8N831 410 aa15.79■□□□□ 0.12
SNHG4-202ENST00000505522 ZBTB38Q8NAP3 1195 aaPredicted RBP15.79■□□□□ 0.12
SNHG4-202ENST00000505522 WBP1LQ9NX94 342 aa15.79■□□□□ 0.12
SNHG4-202ENST00000505522 TRPM7Q96QT4 1865 aa15.78■□□□□ 0.12
SNHG4-202ENST00000505522 C6orf229H3BNL8 230 aa15.78■□□□□ 0.12
SNHG4-202ENST00000505522 RPS8P62241 208 aaKnown RBP15.78■□□□□ 0.12
SNHG4-202ENST00000505522 TRPM4Q8TD43 1214 aa15.78■□□□□ 0.12
SNHG4-202ENST00000505522 JARID2Q92833 1246 aaPredicted RBP15.78■□□□□ 0.12
SNHG4-202ENST00000505522 AIDAQ96BJ3 306 aa15.78■□□□□ 0.12
SNHG4-202ENST00000505522 DBNDD1Q9H9R9 158 aa15.78■□□□□ 0.12
SNHG4-202ENST00000505522 SEC31BQ9NQW1 1179 aa15.78■□□□□ 0.12
SNHG4-202ENST00000505522 PGAP2Q9UHJ9 254 aa15.78■□□□□ 0.12
SNHG4-202ENST00000505522 PSMD14O00487 310 aa15.77■□□□□ 0.12
SNHG4-202ENST00000505522 CTCFP49711 727 aaPredicted RBP15.77■□□□□ 0.12
SNHG4-202ENST00000505522 CCDC30Q5VVM6 783 aa15.77■□□□□ 0.12
SNHG4-202ENST00000505522 CCDC191Q8NCU4 936 aa15.77■□□□□ 0.12
SNHG4-202ENST00000505522 GPR101Q96P66 508 aaPredicted RBP15.77■□□□□ 0.12
SNHG4-202ENST00000505522 METTL22Q9BUU2 404 aaPredicted RBP15.77■□□□□ 0.12
SNHG4-202ENST00000505522 GLIS2Q9BZE0 524 aaPredicted RBP15.77■□□□□ 0.12
SNHG4-202ENST00000505522 CNOT7Q9UIV1 285 aaKnown RBP15.77■□□□□ 0.12
SNHG4-202ENST00000505522 ZBTB12Q9Y330 459 aaPredicted RBP15.77■□□□□ 0.12
SNHG4-202ENST00000505522 PCCAP05165 728 aaPredicted RBP15.76■□□□□ 0.11
SNHG4-202ENST00000505522 DOK7Q18PE1 504 aa15.76■□□□□ 0.11
SNHG4-202ENST00000505522 TBC1D16Q8TBP0 767 aa15.76■□□□□ 0.11
SNHG4-202ENST00000505522 TSR2Q969E8 191 aaKnown RBP15.76■□□□□ 0.11
SNHG4-202ENST00000505522 CAPNS2Q96L46 248 aa15.76■□□□□ 0.11
SNHG4-202ENST00000505522 PRDM10Q9NQV6 1147 aa15.76■□□□□ 0.11
SNHG4-202ENST00000505522 KCNQ5Q9NR82 932 aa15.76■□□□□ 0.11
SNHG4-202ENST00000505522 CWC25Q9NXE8 425 aaPredicted RBP15.76■□□□□ 0.11
SNHG4-202ENST00000505522 TLL2Q9Y6L7 1015 aa15.76■□□□□ 0.11
SNHG4-202ENST00000505522 THSD7BQ9C0I4 1608 aa15.76■□□□□ 0.11
SNHG4-202ENST00000505522 ECE2O60344 883 aa15.75■□□□□ 0.11
SNHG4-202ENST00000505522 DDX58O95786 925 aaKnown RBP15.75■□□□□ 0.11
SNHG4-202ENST00000505522 CYP4F22Q6NT55 531 aa15.75■□□□□ 0.11
SNHG4-202ENST00000505522 PAXIP1Q6ZW49 1069 aaPredicted RBP15.75■□□□□ 0.11
SNHG4-202ENST00000505522 MICALL2Q8IY33 904 aa15.75■□□□□ 0.11
SNHG4-202ENST00000505522 ZC3H15Q8WU90 426 aaKnown RBP15.75■□□□□ 0.11
SNHG4-202ENST00000505522 DPF2Q92785 391 aa15.75■□□□□ 0.11
SNHG4-202ENST00000505522 CCDC85AQ96PX6 553 aaPredicted RBP15.75■□□□□ 0.11
SNHG4-202ENST00000505522 MAP3K2Q9Y2U5 619 aa15.75■□□□□ 0.11
SNHG4-202ENST00000505522 RTL9Q8NET4 1388 aa15.75■□□□□ 0.11
SNHG4-202ENST00000505522 H7C1D1 291 aa15.74■□□□□ 0.11
SNHG4-202ENST00000505522 PDE8AO60658 829 aa15.74■□□□□ 0.11
SNHG4-202ENST00000505522 CELF2O95319 508 aaKnown RBP15.74■□□□□ 0.11
SNHG4-202ENST00000505522 HSP90B1P14625 803 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms