RNA–Protein interactions for RNA: ENST00000504813.5

CNBP-208, Transcript of CCHC-type zinc finger nucleic acid binding protein, human

APPRIS ALT1 TSL 2 BASIC

Gene CNBP, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNBP-208	ENST00000504813	ZNF521	Q96K83	1311 aa		18.88	■□□□□ 0.61
CNBP-208	ENST00000504813	PI4KAP2	A4QPH2	592 aa		18.88	■□□□□ 0.61
CNBP-208	ENST00000504813	DDN	O94850	711 aa	Predicted RBP	18.88	■□□□□ 0.61
CNBP-208	ENST00000504813	PI4KAP1	Q8N8J0	262 aa		18.88	■□□□□ 0.61
CNBP-208	ENST00000504813	MYH3	P11055	1940 aa		18.88	■□□□□ 0.61
CNBP-208	ENST00000504813	IRS4	O14654	1257 aa	Predicted RBP	18.87	■□□□□ 0.61
CNBP-208	ENST00000504813	GRAP	Q13588	217 aa		18.87	■□□□□ 0.61
CNBP-208	ENST00000504813	GRAPL	Q8TC17	118 aa	Predicted RBP	18.87	■□□□□ 0.61
CNBP-208	ENST00000504813	FZD9	O00144	591 aa		18.86	■□□□□ 0.61
CNBP-208	ENST00000504813	SP8	Q8IXZ3	490 aa		18.86	■□□□□ 0.61
CNBP-208	ENST00000504813	CWC25	Q9NXE8	425 aa	Predicted RBP	18.86	■□□□□ 0.61
CNBP-208	ENST00000504813	ZNF541	Q9H0D2	1346 aa		18.86	■□□□□ 0.61
CNBP-208	ENST00000504813	PCCA	P05165	728 aa	Predicted RBP	18.85	■□□□□ 0.61
CNBP-208	ENST00000504813	IGKV5-2	P06315	115 aa		18.85	■□□□□ 0.61
CNBP-208	ENST00000504813	FSTL1	Q12841	308 aa		18.85	■□□□□ 0.61
CNBP-208	ENST00000504813	MYH16	Q9H6N6	1097 aa		18.85	■□□□□ 0.61
CNBP-208	ENST00000504813	TMX4	Q9H1E5	349 aa	Predicted RBP	18.84	■□□□□ 0.61
CNBP-208	ENST00000504813	FLII	Q13045	1269 aa		18.84	■□□□□ 0.61
CNBP-208	ENST00000504813	CELF1	Q92879	486 aa	Known RBP	18.84	■□□□□ 0.61
CNBP-208	ENST00000504813	L3MBTL3	Q96JM7	780 aa	Predicted RBP	18.84	■□□□□ 0.61
CNBP-208	ENST00000504813	RTFDC1	Q9BY42	306 aa	Predicted RBP	18.84	■□□□□ 0.61
CNBP-208	ENST00000504813	DUOX1	Q9NRD9	1551 aa		18.84	■□□□□ 0.61
CNBP-208	ENST00000504813	LTBP1	Q14766	1721 aa		18.83	■□□□□ 0.6
CNBP-208	ENST00000504813	TMC4	Q7Z404	712 aa		18.83	■□□□□ 0.6
CNBP-208	ENST00000504813	JDP2	Q8WYK2	163 aa		18.83	■□□□□ 0.6
CNBP-208	ENST00000504813	JARID2	Q92833	1246 aa	Predicted RBP	18.83	■□□□□ 0.6
CNBP-208	ENST00000504813	NEXN	Q0ZGT2	675 aa		18.82	■□□□□ 0.6
CNBP-208	ENST00000504813	SMC1B	Q8NDV3	1235 aa		18.82	■□□□□ 0.6
CNBP-208	ENST00000504813	VPS33B	Q9H267	617 aa		18.82	■□□□□ 0.6
CNBP-208	ENST00000504813	CDHR2	Q9BYE9	1310 aa		18.82	■□□□□ 0.6
CNBP-208	ENST00000504813	NEURL1B	A8MQ27	555 aa		18.81	■□□□□ 0.6
CNBP-208	ENST00000504813	PDE8A	O60658	829 aa		18.81	■□□□□ 0.6
CNBP-208	ENST00000504813	HSP90B1	P14625	803 aa	Known RBP	18.81	■□□□□ 0.6
CNBP-208	ENST00000504813	CWF19L2	Q2TBE0	894 aa	Known RBP	18.81	■□□□□ 0.6
CNBP-208	ENST00000504813	DPP8	Q6V1X1	898 aa	Predicted RBP	18.81	■□□□□ 0.6
CNBP-208	ENST00000504813	LARGE2	Q8N3Y3	721 aa		18.81	■□□□□ 0.6
CNBP-208	ENST00000504813	MPND	Q8N594	471 aa		18.81	■□□□□ 0.6
CNBP-208	ENST00000504813	FKBP5	Q13451	457 aa	Predicted RBP	18.8	■□□□□ 0.6
CNBP-208	ENST00000504813	AOC3	Q16853	763 aa		18.8	■□□□□ 0.6
CNBP-208	ENST00000504813	SUPT20H	Q8NEM7	779 aa		18.8	■□□□□ 0.6
CNBP-208	ENST00000504813	SPEF2	Q9C093	1822 aa		18.8	■□□□□ 0.6
CNBP-208	ENST00000504813	PPIP5K2	O43314	1243 aa		18.79	■□□□□ 0.6
CNBP-208	ENST00000504813	APLP1	P51693	650 aa		18.79	■□□□□ 0.6
CNBP-208	ENST00000504813	GPC2	Q8N158	579 aa		18.79	■□□□□ 0.6
CNBP-208	ENST00000504813	IQCA1L	A6NCM1	817 aa		18.79	■□□□□ 0.6
CNBP-208	ENST00000504813	DNAAF4	Q8WXU2	420 aa		18.79	■□□□□ 0.6
CNBP-208	ENST00000504813	SEC31B	Q9NQW1	1179 aa		18.79	■□□□□ 0.6
CNBP-208	ENST00000504813	ADAMTSL1	Q8N6G6	1762 aa		18.79	■□□□□ 0.6
CNBP-208	ENST00000504813	EIF6	P56537	245 aa	Known RBP	18.78	■□□□□ 0.6
CNBP-208	ENST00000504813	RPS8	P62241	208 aa	Known RBP	18.78	■□□□□ 0.6
CNBP-208	ENST00000504813	CCDC152	Q4G0S7	254 aa		18.78	■□□□□ 0.6
CNBP-208	ENST00000504813	NIM1K	Q8IY84	436 aa		18.78	■□□□□ 0.6
CNBP-208	ENST00000504813	TAF1D	Q9H5J8	278 aa	Predicted RBP	18.78	■□□□□ 0.6
CNBP-208	ENST00000504813		H7C1W4	665 aa		18.77	■□□□□ 0.6
CNBP-208	ENST00000504813	POTEI	P0CG38	1075 aa		18.77	■□□□□ 0.6
CNBP-208	ENST00000504813	POTEJ	P0CG39	1038 aa		18.77	■□□□□ 0.6
CNBP-208	ENST00000504813	KIAA2012	Q0VF49	1180 aa		18.77	■□□□□ 0.6
CNBP-208	ENST00000504813	GCKR	Q14397	625 aa		18.76	■□□□□ 0.59
CNBP-208	ENST00000504813	LINS1	Q8NG48	757 aa		18.76	■□□□□ 0.59
CNBP-208	ENST00000504813	CTSW	P56202	376 aa		18.75	■□□□□ 0.59
CNBP-208	ENST00000504813	TTLL11	Q8NHH1	800 aa		18.75	■□□□□ 0.59
CNBP-208	ENST00000504813	CCDC85A	Q96PX6	553 aa	Predicted RBP	18.75	■□□□□ 0.59
CNBP-208	ENST00000504813	HACL1	Q9UJ83	578 aa		18.75	■□□□□ 0.59
CNBP-208	ENST00000504813	NSFL1C	Q9UNZ2	370 aa	Known RBP	18.75	■□□□□ 0.59
CNBP-208	ENST00000504813		E9PSI1	815 aa		18.74	■□□□□ 0.59
CNBP-208	ENST00000504813		F6X3S4	739 aa		18.74	■□□□□ 0.59
CNBP-208	ENST00000504813	CASP7	P55210	303 aa		18.74	■□□□□ 0.59
CNBP-208	ENST00000504813	GPSM2	P81274	684 aa		18.74	■□□□□ 0.59
CNBP-208	ENST00000504813	SLFN5	Q08AF3	891 aa		18.74	■□□□□ 0.59
CNBP-208	ENST00000504813	UBE3B	Q7Z3V4	1068 aa		18.74	■□□□□ 0.59
CNBP-208	ENST00000504813	ZNRF3	Q9ULT6	936 aa		18.74	■□□□□ 0.59
CNBP-208	ENST00000504813	GJA3	Q9Y6H8	435 aa		18.74	■□□□□ 0.59
CNBP-208	ENST00000504813	EPHX2	P34913	555 aa		18.74	■□□□□ 0.59
CNBP-208	ENST00000504813	CHADL	Q6NUI6	762 aa		18.74	■□□□□ 0.59
CNBP-208	ENST00000504813	DNAJC5G	Q8N7S2	189 aa		18.74	■□□□□ 0.59
CNBP-208	ENST00000504813	POLL	Q9UGP5	575 aa		18.74	■□□□□ 0.59
CNBP-208	ENST00000504813	RTL9	Q8NET4	1388 aa		18.73	■□□□□ 0.59
CNBP-208	ENST00000504813	SCNN1D	P51172	638 aa		18.73	■□□□□ 0.59
CNBP-208	ENST00000504813	CXCL9	Q07325	125 aa		18.73	■□□□□ 0.59
CNBP-208	ENST00000504813	PLA2G12B	Q9BX93	195 aa		18.73	■□□□□ 0.59
CNBP-208	ENST00000504813	PODXL2	Q9NZ53	605 aa		18.73	■□□□□ 0.59
CNBP-208	ENST00000504813	HTRA3	P83110	453 aa		18.72	■□□□□ 0.59
CNBP-208	ENST00000504813	WASHC4	Q2M389	1173 aa		18.72	■□□□□ 0.59
CNBP-208	ENST00000504813	BEND3	Q5T5X7	828 aa		18.72	■□□□□ 0.59
CNBP-208	ENST00000504813	LDHD	Q86WU2	507 aa		18.72	■□□□□ 0.59
CNBP-208	ENST00000504813	GREM2	Q9H772	168 aa		18.72	■□□□□ 0.59
CNBP-208	ENST00000504813	GTF3C3	Q9Y5Q9	886 aa		18.72	■□□□□ 0.59
CNBP-208	ENST00000504813	ANKRD18A	Q8IVF6	992 aa		18.71	■□□□□ 0.59
CNBP-208	ENST00000504813	TBC1D16	Q8TBP0	767 aa		18.71	■□□□□ 0.59
CNBP-208	ENST00000504813	CDCA7L	Q96GN5	454 aa		18.71	■□□□□ 0.59
CNBP-208	ENST00000504813	YDJC	A8MPS7	323 aa		18.7	■□□□□ 0.58
CNBP-208	ENST00000504813	C6orf229	H3BNL8	230 aa		18.7	■□□□□ 0.58
CNBP-208	ENST00000504813	EAPP	Q56P03	285 aa	Predicted RBP	18.7	■□□□□ 0.58
CNBP-208	ENST00000504813	PNMA8A	Q86V59	439 aa	Predicted RBP	18.7	■□□□□ 0.58
CNBP-208	ENST00000504813	TRMT2A	Q8IZ69	625 aa	Known RBP	18.7	■□□□□ 0.58
CNBP-208	ENST00000504813	SCN9A	Q15858	1988 aa		18.7	■□□□□ 0.58
CNBP-208	ENST00000504813	EPS15	P42566	896 aa		18.69	■□□□□ 0.58
CNBP-208	ENST00000504813	CDC5L	Q99459	802 aa	Known RBP	18.69	■□□□□ 0.58
CNBP-208	ENST00000504813	PSME4	Q14997	1843 aa		18.69	■□□□□ 0.58
CNBP-208	ENST00000504813	RIMBP2	O15034	1052 aa		18.69	■□□□□ 0.58

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