RNA–Protein interactions for RNA: ENST00000504487.5

CCDC149-204, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC149, Length 3,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-204ENST00000504487 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.03□□□□□ -0.8
CCDC149-204ENST00000504487 EIF3JO75822 258 aaKnown RBP10.03□□□□□ -0.8
CCDC149-204ENST00000504487 GCP02774 474 aa10.03□□□□□ -0.8
CCDC149-204ENST00000504487 PNMA6AP0CW24 399 aaPredicted RBP10.03□□□□□ -0.8
CCDC149-204ENST00000504487 ME3Q16798 604 aa10.03□□□□□ -0.8
CCDC149-204ENST00000504487 ERCC4Q92889 916 aaPredicted RBP10.03□□□□□ -0.8
CCDC149-204ENST00000504487 PUS7Q96PZ0 661 aaKnown RBP10.03□□□□□ -0.8
CCDC149-204ENST00000504487 IFNKQ9P0W0 207 aa10.03□□□□□ -0.8
CCDC149-204ENST00000504487 CASQ1P31415 396 aa10.02□□□□□ -0.81
CCDC149-204ENST00000504487 DHX8Q14562 1220 aaKnown RBP10.02□□□□□ -0.81
CCDC149-204ENST00000504487 ACBD3Q9H3P7 528 aa10.02□□□□□ -0.81
CCDC149-204ENST00000504487 RBM8AQ9Y5S9 174 aaKnown RBP10.02□□□□□ -0.81
CCDC149-204ENST00000504487 KIF24Q5T7B8 1368 aa10.02□□□□□ -0.81
CCDC149-204ENST00000504487 G3BP1Q13283 466 aaKnown RBP eCLIP10.02□□□□□ -0.81
CCDC149-204ENST00000504487 CTR9Q6PD62 1173 aa10.02□□□□□ -0.81
CCDC149-204ENST00000504487 SYNE3Q6ZMZ3 975 aa10.02□□□□□ -0.81
CCDC149-204ENST00000504487 CADPS2Q86UW7 1296 aa10.02□□□□□ -0.81
CCDC149-204ENST00000504487 BRF1Q92994 677 aa10.02□□□□□ -0.81
CCDC149-204ENST00000504487 A0A087WWV3 80 aa10.02□□□□□ -0.81
CCDC149-204ENST00000504487 ZSCAN12O43309 604 aa10.02□□□□□ -0.81
CCDC149-204ENST00000504487 SEC31AO94979 1220 aaKnown RBP10.02□□□□□ -0.81
CCDC149-204ENST00000504487 SETQ01105 290 aaPredicted RBP10.02□□□□□ -0.81
CCDC149-204ENST00000504487 SMC1AQ14683 1233 aaKnown RBP10.02□□□□□ -0.81
CCDC149-204ENST00000504487 ERLIN1O75477 346 aa10.01□□□□□ -0.81
CCDC149-204ENST00000504487 CYP2C19P33261 490 aa10.01□□□□□ -0.81
CCDC149-204ENST00000504487 AACSQ86V21 672 aa10.01□□□□□ -0.81
CCDC149-204ENST00000504487 C19orf44Q9H6X5 657 aa10.01□□□□□ -0.81
CCDC149-204ENST00000504487 MADDQ8WXG6 1647 aa10.01□□□□□ -0.81
CCDC149-204ENST00000504487 FAM135BQ49AJ0 1406 aa10.01□□□□□ -0.81
CCDC149-204ENST00000504487 LMOD1P29536 600 aaPredicted RBP10.01□□□□□ -0.81
CCDC149-204ENST00000504487 TTC31Q49AM3 519 aaPredicted RBP10.01□□□□□ -0.81
CCDC149-204ENST00000504487 JAKMIP3Q5VZ66 844 aa10.01□□□□□ -0.81
CCDC149-204ENST00000504487 MRFAP1L1Q96HT8 127 aa10.01□□□□□ -0.81
CCDC149-204ENST00000504487 ZCCHC17Q9NP64 241 aaKnown RBP10.01□□□□□ -0.81
CCDC149-204ENST00000504487 HYPKQ9NX55 129 aa10.01□□□□□ -0.81
CCDC149-204ENST00000504487 VPS18Q9P253 973 aa10.01□□□□□ -0.81
CCDC149-204ENST00000504487 FEZ2Q9UHY8 353 aaPredicted RBP10.01□□□□□ -0.81
CCDC149-204ENST00000504487 ROBO2Q9HCK4 1378 aa10.01□□□□□ -0.81
CCDC149-204ENST00000504487 SSH2Q76I76 1423 aa10.01□□□□□ -0.81
CCDC149-204ENST00000504487 HIP1O00291 1037 aa10.01□□□□□ -0.81
CCDC149-204ENST00000504487 RBM6P78332 1123 aaKnown RBP10.01□□□□□ -0.81
CCDC149-204ENST00000504487 NEUROD6Q96NK8 337 aa10.01□□□□□ -0.81
CCDC149-204ENST00000504487 FUCA2Q9BTY2 467 aa10.01□□□□□ -0.81
CCDC149-204ENST00000504487 SRRTQ9BXP5 876 aaKnown RBP10.01□□□□□ -0.81
CCDC149-204ENST00000504487 PRR36Q9H6K5 1346 aa10.01□□□□□ -0.81
CCDC149-204ENST00000504487 ADCK5Q3MIX3 580 aa10□□□□□ -0.81
CCDC149-204ENST00000504487 PLA2G4DQ86XP0 818 aa10□□□□□ -0.81
CCDC149-204ENST00000504487 DRC1Q96MC2 740 aa10□□□□□ -0.81
CCDC149-204ENST00000504487 RPAP1Q9BWH6 1393 aaPredicted RBP10□□□□□ -0.81
CCDC149-204ENST00000504487 PHACTR2O75167 634 aa10□□□□□ -0.81
CCDC149-204ENST00000504487 DDX58O95786 925 aaKnown RBP10□□□□□ -0.81
CCDC149-204ENST00000504487 TOP1P11387 765 aaKnown RBP10□□□□□ -0.81
CCDC149-204ENST00000504487 OLFM4Q6UX06 510 aa10□□□□□ -0.81
CCDC149-204ENST00000504487 UTP14AQ9BVJ6 771 aaKnown RBP10□□□□□ -0.81
CCDC149-204ENST00000504487 HECW2Q9P2P5 1572 aa10□□□□□ -0.81
CCDC149-204ENST00000504487 MYO1CO00159 1063 aa10□□□□□ -0.81
CCDC149-204ENST00000504487 IVLP07476 585 aa10□□□□□ -0.81
CCDC149-204ENST00000504487 ZNF853P0CG23 659 aa10□□□□□ -0.81
CCDC149-204ENST00000504487 HDAC5Q9UQL6 1122 aa10□□□□□ -0.81
CCDC149-204ENST00000504487 PIK3R4Q99570 1358 aa10□□□□□ -0.81
CCDC149-204ENST00000504487 SLFNL1Q499Z3 407 aa9.99□□□□□ -0.81
CCDC149-204ENST00000504487 CREB3L3Q68CJ9 461 aa9.99□□□□□ -0.81
CCDC149-204ENST00000504487 C11orf57Q6ZUT1 292 aaPredicted RBP9.99□□□□□ -0.81
CCDC149-204ENST00000504487 ARHGAP31Q2M1Z3 1444 aa9.99□□□□□ -0.81
CCDC149-204ENST00000504487 A0A1B0GUL7 405 aa9.99□□□□□ -0.81
CCDC149-204ENST00000504487 H0YHG0 523 aa9.99□□□□□ -0.81
CCDC149-204ENST00000504487 CBFA2T2O43439 604 aa9.99□□□□□ -0.81
CCDC149-204ENST00000504487 TAF7Q15545 349 aaPredicted RBP9.99□□□□□ -0.81
CCDC149-204ENST00000504487 BOLA2Q9H3K6 86 aa9.99□□□□□ -0.81
CCDC149-204ENST00000504487 ECHDC1Q9NTX5 307 aa9.99□□□□□ -0.81
CCDC149-204ENST00000504487 MED14O60244 1454 aa9.99□□□□□ -0.81
CCDC149-204ENST00000504487 CPLX1O14810 134 aa9.99□□□□□ -0.81
CCDC149-204ENST00000504487 SLC3A2P08195 630 aaKnown RBP9.99□□□□□ -0.81
CCDC149-204ENST00000504487 IL13P35225 146 aa9.99□□□□□ -0.81
CCDC149-204ENST00000504487 ZSCAN16Q9H4T2 348 aaPredicted RBP9.99□□□□□ -0.81
CCDC149-204ENST00000504487 TPCN1Q9ULQ1 816 aa9.99□□□□□ -0.81
CCDC149-204ENST00000504487 SOS1Q07889 1333 aaPredicted RBP9.99□□□□□ -0.81
CCDC149-204ENST00000504487 ABCC3O15438 1527 aa9.99□□□□□ -0.81
CCDC149-204ENST00000504487 ELP1O95163 1332 aa9.98□□□□□ -0.81
CCDC149-204ENST00000504487 TUBB4AP04350 444 aa9.98□□□□□ -0.81
CCDC149-204ENST00000504487 GYS2P54840 703 aa9.98□□□□□ -0.81
CCDC149-204ENST00000504487 ETF1P62495 437 aaKnown RBP9.98□□□□□ -0.81
CCDC149-204ENST00000504487 PTH1RQ03431 593 aa9.98□□□□□ -0.81
CCDC149-204ENST00000504487 CCDC12Q8WUD4 166 aaPredicted RBP9.98□□□□□ -0.81
CCDC149-204ENST00000504487 LRRC2Q9BYS8 371 aa9.98□□□□□ -0.81
CCDC149-204ENST00000504487 EFCC1Q9HA90 598 aa9.98□□□□□ -0.81
CCDC149-204ENST00000504487 CHL1O00533 1208 aa9.98□□□□□ -0.81
CCDC149-204ENST00000504487 CCDC8Q9H0W5 538 aaPredicted RBP9.98□□□□□ -0.81
CCDC149-204ENST00000504487 TRIM66O15016 1216 aa9.98□□□□□ -0.81
CCDC149-204ENST00000504487 CDC25BP30305 580 aa9.98□□□□□ -0.81
CCDC149-204ENST00000504487 UBASH3AP57075 661 aa9.98□□□□□ -0.81
CCDC149-204ENST00000504487 CCT2P78371 535 aaKnown RBP9.98□□□□□ -0.81
CCDC149-204ENST00000504487 HSP90AA4PQ58FG1 418 aa9.98□□□□□ -0.81
CCDC149-204ENST00000504487 AXDND1Q5T1B0 1012 aaPredicted RBP9.98□□□□□ -0.81
CCDC149-204ENST00000504487 SMARCE1Q969G3 411 aa9.98□□□□□ -0.81
CCDC149-204ENST00000504487 PPP1R13BQ96KQ4 1090 aa9.98□□□□□ -0.81
CCDC149-204ENST00000504487 XPO4Q9C0E2 1151 aaKnown RBP9.98□□□□□ -0.81
CCDC149-204ENST00000504487 LSG1Q9H089 658 aaKnown RBP9.98□□□□□ -0.81
CCDC149-204ENST00000504487 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.98□□□□□ -0.81
CCDC149-204ENST00000504487 TRPM2O94759 1503 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 297.5 ms