RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 FMR1Q06787 632 aaKnown RBP eCLIP15.44■□□□□ 0.06
MED28-203ENST00000503945 CCDC30Q5VVM6 783 aa15.44■□□□□ 0.06
MED28-203ENST00000503945 LARGE2Q8N3Y3 721 aa15.44■□□□□ 0.06
MED28-203ENST00000503945 C8orf58Q8NAV2 365 aa15.44■□□□□ 0.06
MED28-203ENST00000503945 AIDAQ96BJ3 306 aa15.44■□□□□ 0.06
MED28-203ENST00000503945 ATP6V0A2Q9Y487 856 aa15.44■□□□□ 0.06
MED28-203ENST00000503945 RASSF10A6NK89 507 aa15.43■□□□□ 0.06
MED28-203ENST00000503945 TRIM28Q13263 835 aaKnown RBP15.43■□□□□ 0.06
MED28-203ENST00000503945 CCDC27Q2M243 656 aa15.43■□□□□ 0.06
MED28-203ENST00000503945 SP8Q8IXZ3 490 aa15.43■□□□□ 0.06
MED28-203ENST00000503945 ISCA1Q9BUE6 129 aa15.43■□□□□ 0.06
MED28-203ENST00000503945 WDR33Q9C0J8 1336 aaKnown RBP15.43■□□□□ 0.06
MED28-203ENST00000503945 LMOD1P29536 600 aaPredicted RBP15.42■□□□□ 0.06
MED28-203ENST00000503945 SCNN1DP51172 638 aa15.42■□□□□ 0.06
MED28-203ENST00000503945 LBX1P52954 281 aa15.42■□□□□ 0.06
MED28-203ENST00000503945 GOLGA2Q08379 1002 aa15.42■□□□□ 0.06
MED28-203ENST00000503945 WWC1Q8IX03 1113 aa15.42■□□□□ 0.06
MED28-203ENST00000503945 SUPT20HQ8NEM7 779 aa15.42■□□□□ 0.06
MED28-203ENST00000503945 ZNF428Q96B54 188 aa15.42■□□□□ 0.06
MED28-203ENST00000503945 FAM89AQ96GI7 184 aa15.42■□□□□ 0.06
MED28-203ENST00000503945 VPS33BQ9H267 617 aa15.42■□□□□ 0.06
MED28-203ENST00000503945 PHAXQ9H814 394 aaKnown RBP15.42■□□□□ 0.06
MED28-203ENST00000503945 RIC1Q4ADV7 1423 aa15.42■□□□□ 0.06
MED28-203ENST00000503945 DDX58O95786 925 aaKnown RBP15.41■□□□□ 0.06
MED28-203ENST00000503945 HSP90B1P14625 803 aaKnown RBP15.41■□□□□ 0.06
MED28-203ENST00000503945 NCBP3Q53F19 620 aaKnown RBP15.41■□□□□ 0.06
MED28-203ENST00000503945 ABT1Q9ULW3 272 aaKnown RBP15.41■□□□□ 0.06
MED28-203ENST00000503945 TRPM7Q96QT4 1865 aa15.4■□□□□ 0.06
MED28-203ENST00000503945 DPP8Q6V1X1 898 aaPredicted RBP15.4■□□□□ 0.06
MED28-203ENST00000503945 TMC4Q7Z404 712 aa15.4■□□□□ 0.06
MED28-203ENST00000503945 MPNDQ8N594 471 aa15.4■□□□□ 0.06
MED28-203ENST00000503945 ABCC4O15439 1325 aa15.4■□□□□ 0.06
MED28-203ENST00000503945 PPIP5K2O43314 1243 aa15.39■□□□□ 0.05
MED28-203ENST00000503945 GRAPQ13588 217 aa15.39■□□□□ 0.05
MED28-203ENST00000503945 SF3B3Q15393 1217 aaKnown RBP15.39■□□□□ 0.05
MED28-203ENST00000503945 AOC3Q16853 763 aa15.39■□□□□ 0.05
MED28-203ENST00000503945 RTL5Q5HYW3 569 aaPredicted RBP15.39■□□□□ 0.05
MED28-203ENST00000503945 CST9Q5W186 159 aa15.39■□□□□ 0.05
MED28-203ENST00000503945 USP50Q70EL3 339 aaPredicted RBP15.39■□□□□ 0.05
MED28-203ENST00000503945 NIM1KQ8IY84 436 aa15.39■□□□□ 0.05
MED28-203ENST00000503945 GRAPLQ8TC17 118 aaPredicted RBP15.39■□□□□ 0.05
MED28-203ENST00000503945 STK31Q9BXU1 1019 aa15.39■□□□□ 0.05
MED28-203ENST00000503945 TRAF5O00463 557 aa15.38■□□□□ 0.05
MED28-203ENST00000503945 IRS4O14654 1257 aaPredicted RBP15.38■□□□□ 0.05
MED28-203ENST00000503945 HSPA8P11142 646 aaKnown RBP15.38■□□□□ 0.05
MED28-203ENST00000503945 MAP2K1Q02750 393 aaPredicted RBP15.38■□□□□ 0.05
MED28-203ENST00000503945 TSPYL6Q8N831 410 aa15.38■□□□□ 0.05
MED28-203ENST00000503945 ZBTB38Q8NAP3 1195 aaPredicted RBP15.38■□□□□ 0.05
MED28-203ENST00000503945 TSR2Q969E8 191 aaKnown RBP15.38■□□□□ 0.05
MED28-203ENST00000503945 MYD88Q99836 296 aa15.38■□□□□ 0.05
MED28-203ENST00000503945 SALL2Q9Y467 1007 aaPredicted RBP15.38■□□□□ 0.05
MED28-203ENST00000503945 TAF1P21675 1872 aa15.37■□□□□ 0.05
MED28-203ENST00000503945 LAMB2P55268 1798 aa15.37■□□□□ 0.05
MED28-203ENST00000503945 CXCL9Q07325 125 aa15.37■□□□□ 0.05
MED28-203ENST00000503945 CCDC191Q8NCU4 936 aa15.37■□□□□ 0.05
MED28-203ENST00000503945 RTFDC1Q9BY42 306 aaPredicted RBP15.37■□□□□ 0.05
MED28-203ENST00000503945 SLC4A2P04920 1241 aa15.36■□□□□ 0.05
MED28-203ENST00000503945 RPS8P62241 208 aaKnown RBP15.36■□□□□ 0.05
MED28-203ENST00000503945 TWISTNBQ3B726 338 aaPredicted RBP15.36■□□□□ 0.05
MED28-203ENST00000503945 CYP4F22Q6NT55 531 aa15.36■□□□□ 0.05
MED28-203ENST00000503945 KSR2Q6VAB6 950 aa15.36■□□□□ 0.05
MED28-203ENST00000503945 WDR63Q8IWG1 891 aa15.36■□□□□ 0.05
MED28-203ENST00000503945 CAPNS2Q96L46 248 aa15.36■□□□□ 0.05
MED28-203ENST00000503945 METTL22Q9BUU2 404 aaPredicted RBP15.36■□□□□ 0.05
MED28-203ENST00000503945 GPRC5DQ9NZD1 345 aa15.36■□□□□ 0.05
MED28-203ENST00000503945 ZNRF3Q9ULT6 936 aa15.36■□□□□ 0.05
MED28-203ENST00000503945 NSFL1CQ9UNZ2 370 aaKnown RBP15.36■□□□□ 0.05
MED28-203ENST00000503945 IL16Q14005 1332 aa15.36■□□□□ 0.05
MED28-203ENST00000503945 ANKRD36CQ5JPF3 1778 aa15.35■□□□□ 0.05
MED28-203ENST00000503945 GRM1Q13255 1194 aa15.35■□□□□ 0.05
MED28-203ENST00000503945 PAXIP1Q6ZW49 1069 aaPredicted RBP15.35■□□□□ 0.05
MED28-203ENST00000503945 ADARB2Q9NS39 739 aaKnown RBP15.35■□□□□ 0.05
MED28-203ENST00000503945 CWC25Q9NXE8 425 aaPredicted RBP15.35■□□□□ 0.05
MED28-203ENST00000503945 MAP3K2Q9Y2U5 619 aa15.35■□□□□ 0.05
MED28-203ENST00000503945 PI4KAP2A4QPH2 592 aa15.34■□□□□ 0.05
MED28-203ENST00000503945 GMPSP49915 693 aaPredicted RBP15.34■□□□□ 0.05
MED28-203ENST00000503945 NEXNQ0ZGT2 675 aa15.34■□□□□ 0.05
MED28-203ENST00000503945 FAM9BQ8IZU0 186 aa15.34■□□□□ 0.05
MED28-203ENST00000503945 PI4KAP1Q8N8J0 262 aa15.34■□□□□ 0.05
MED28-203ENST00000503945 GPR101Q96P66 508 aaPredicted RBP15.34■□□□□ 0.05
MED28-203ENST00000503945 TLL2Q9Y6L7 1015 aa15.34■□□□□ 0.05
MED28-203ENST00000503945 PCCAP05165 728 aaPredicted RBP15.33■□□□□ 0.04
MED28-203ENST00000503945 ECE1P42892 770 aa15.33■□□□□ 0.04
MED28-203ENST00000503945 KIAA2012Q0VF49 1180 aa15.33■□□□□ 0.04
MED28-203ENST00000503945 TNIP1Q15025 636 aa15.33■□□□□ 0.04
MED28-203ENST00000503945 WASHC4Q2M389 1173 aa15.33■□□□□ 0.04
MED28-203ENST00000503945 CELF1Q92879 486 aaKnown RBP15.33■□□□□ 0.04
MED28-203ENST00000503945 ABHD8Q96I13 439 aa15.33■□□□□ 0.04
MED28-203ENST00000503945 C6orf229H3BNL8 230 aa15.32■□□□□ 0.04
MED28-203ENST00000503945 PDE8AO60658 829 aa15.32■□□□□ 0.04
MED28-203ENST00000503945 AOC2O75106 756 aa15.32■□□□□ 0.04
MED28-203ENST00000503945 RAD17O75943 681 aa15.32■□□□□ 0.04
MED28-203ENST00000503945 HIRAP54198 1017 aaPredicted RBP15.32■□□□□ 0.04
MED28-203ENST00000503945 CCDC152Q4G0S7 254 aa15.32■□□□□ 0.04
MED28-203ENST00000503945 CIAPIN1Q6FI81 312 aa15.32■□□□□ 0.04
MED28-203ENST00000503945 JARID2Q92833 1246 aaPredicted RBP15.32■□□□□ 0.04
MED28-203ENST00000503945 PGAP2Q9UHJ9 254 aa15.32■□□□□ 0.04
MED28-203ENST00000503945 POLR2AP24928 1970 aaKnown RBP15.31■□□□□ 0.04
MED28-203ENST00000503945 BCL2L13Q9BXK5 485 aa15.31■□□□□ 0.04
MED28-203ENST00000503945 GLIS2Q9BZE0 524 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms