RNA–Protein interactions for RNA: ENST00000502690.5

UBE2D3-213, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-213ENST00000502690 GRAPQ13588 217 aa22.17■■□□□ 1.14
UBE2D3-213ENST00000502690 SP8Q8IXZ3 490 aa22.17■■□□□ 1.14
UBE2D3-213ENST00000502690 GRAPLQ8TC17 118 aaPredicted RBP22.17■■□□□ 1.14
UBE2D3-213ENST00000502690 BBOX1O75936 387 aa22.16■■□□□ 1.14
UBE2D3-213ENST00000502690 CCDC184Q52MB2 194 aa22.16■■□□□ 1.14
UBE2D3-213ENST00000502690 RTL5Q5HYW3 569 aaPredicted RBP22.16■■□□□ 1.14
UBE2D3-213ENST00000502690 DPP8Q6V1X1 898 aaPredicted RBP22.16■■□□□ 1.14
UBE2D3-213ENST00000502690 DDX46Q7L014 1031 aaKnown RBP22.16■■□□□ 1.14
UBE2D3-213ENST00000502690 ELL2O00472 640 aaPredicted RBP22.15■■□□□ 1.14
UBE2D3-213ENST00000502690 LMOD1P29536 600 aaPredicted RBP22.15■■□□□ 1.14
UBE2D3-213ENST00000502690 MPNDQ8N594 471 aa22.15■■□□□ 1.14
UBE2D3-213ENST00000502690 CELF1Q92879 486 aaKnown RBP22.15■■□□□ 1.14
UBE2D3-213ENST00000502690 PHAXQ9H814 394 aaKnown RBP22.15■■□□□ 1.14
UBE2D3-213ENST00000502690 THSD7BQ9C0I4 1608 aa22.14■■□□□ 1.14
UBE2D3-213ENST00000502690 KIAA2012Q0VF49 1180 aa22.14■■□□□ 1.13
UBE2D3-213ENST00000502690 TNS4Q8IZW8 715 aa22.14■■□□□ 1.13
UBE2D3-213ENST00000502690 HYPKQ9NX55 129 aa22.14■■□□□ 1.13
UBE2D3-213ENST00000502690 ZNRF3Q9ULT6 936 aa22.14■■□□□ 1.13
UBE2D3-213ENST00000502690 SCN9AQ15858 1988 aa22.14■■□□□ 1.13
UBE2D3-213ENST00000502690 YDJCA8MPS7 323 aa22.13■■□□□ 1.13
UBE2D3-213ENST00000502690 TRAF5O00463 557 aa22.13■■□□□ 1.13
UBE2D3-213ENST00000502690 FOXN1O15353 648 aa22.13■■□□□ 1.13
UBE2D3-213ENST00000502690 IFT57Q9NWB7 429 aa22.13■■□□□ 1.13
UBE2D3-213ENST00000502690 GPRC5DQ9NZD1 345 aa22.13■■□□□ 1.13
UBE2D3-213ENST00000502690 SHTN1A0MZ66 631 aa22.12■■□□□ 1.13
UBE2D3-213ENST00000502690 CAPN15O75808 1086 aa22.12■■□□□ 1.13
UBE2D3-213ENST00000502690 GMPSP49915 693 aaPredicted RBP22.12■■□□□ 1.13
UBE2D3-213ENST00000502690 C8orf58Q8NAV2 365 aa22.12■■□□□ 1.13
UBE2D3-213ENST00000502690 SUPT20HQ8NEM7 779 aa22.12■■□□□ 1.13
UBE2D3-213ENST00000502690 TMX4Q9H1E5 349 aaPredicted RBP22.12■■□□□ 1.13
UBE2D3-213ENST00000502690 SPEF2Q9C093 1822 aa22.11■■□□□ 1.13
UBE2D3-213ENST00000502690 RASSF10A6NK89 507 aa22.11■■□□□ 1.13
UBE2D3-213ENST00000502690 RAD17O75943 681 aa22.11■■□□□ 1.13
UBE2D3-213ENST00000502690 SF3B3Q15393 1217 aaKnown RBP22.11■■□□□ 1.13
UBE2D3-213ENST00000502690 VPS33BQ9H267 617 aa22.11■■□□□ 1.13
UBE2D3-213ENST00000502690 USP50Q70EL3 339 aaPredicted RBP22.1■■□□□ 1.13
UBE2D3-213ENST00000502690 IRS4O14654 1257 aaPredicted RBP22.09■■□□□ 1.13
UBE2D3-213ENST00000502690 GNAI1P63096 354 aa22.09■■□□□ 1.13
UBE2D3-213ENST00000502690 CIAPIN1Q6FI81 312 aa22.09■■□□□ 1.13
UBE2D3-213ENST00000502690 GPR101Q96P66 508 aaPredicted RBP22.09■■□□□ 1.13
UBE2D3-213ENST00000502690 POLR2AP24928 1970 aaKnown RBP22.08■■□□□ 1.13
UBE2D3-213ENST00000502690 MYH3P11055 1940 aa22.08■■□□□ 1.13
UBE2D3-213ENST00000502690 GPSM2P81274 684 aa22.08■■□□□ 1.13
UBE2D3-213ENST00000502690 TRIM28Q13263 835 aaKnown RBP22.08■■□□□ 1.13
UBE2D3-213ENST00000502690 CST9Q5W186 159 aa22.08■■□□□ 1.13
UBE2D3-213ENST00000502690 TSPYL6Q8N831 410 aa22.08■■□□□ 1.13
UBE2D3-213ENST00000502690 JARID2Q92833 1246 aaPredicted RBP22.08■■□□□ 1.13
UBE2D3-213ENST00000502690 MYD88Q99836 296 aa22.08■■□□□ 1.13
UBE2D3-213ENST00000502690 ADARB2Q9NS39 739 aaKnown RBP22.08■■□□□ 1.13
UBE2D3-213ENST00000502690 ABT1Q9ULW3 272 aaKnown RBP22.08■■□□□ 1.13
UBE2D3-213ENST00000502690 HIRAP54198 1017 aaPredicted RBP22.07■■□□□ 1.12
UBE2D3-213ENST00000502690 DEFB115Q30KQ5 88 aa22.07■■□□□ 1.12
UBE2D3-213ENST00000502690 RIC3Q7Z5B4 369 aa22.07■■□□□ 1.12
UBE2D3-213ENST00000502690 TRPM4Q8TD43 1214 aa22.07■■□□□ 1.12
UBE2D3-213ENST00000502690 POLLQ9UGP5 575 aa22.07■■□□□ 1.12
UBE2D3-213ENST00000502690 GOLGA2Q08379 1002 aa22.06■■□□□ 1.12
UBE2D3-213ENST00000502690 TMC4Q7Z404 712 aa22.06■■□□□ 1.12
UBE2D3-213ENST00000502690 TSR2Q969E8 191 aaKnown RBP22.06■■□□□ 1.12
UBE2D3-213ENST00000502690 DBNDD1Q9H9R9 158 aa22.06■■□□□ 1.12
UBE2D3-213ENST00000502690 SEC31BQ9NQW1 1179 aa22.06■■□□□ 1.12
UBE2D3-213ENST00000502690 NSFL1CQ9UNZ2 370 aaKnown RBP22.06■■□□□ 1.12
UBE2D3-213ENST00000502690 PSME4Q14997 1843 aa22.06■■□□□ 1.12
UBE2D3-213ENST00000502690 ZBTB38Q8NAP3 1195 aaPredicted RBP22.05■■□□□ 1.12
UBE2D3-213ENST00000502690 WBP1LQ9NX94 342 aa22.05■■□□□ 1.12
UBE2D3-213ENST00000502690 ZBTB12Q9Y330 459 aaPredicted RBP22.05■■□□□ 1.12
UBE2D3-213ENST00000502690 WDR33Q9C0J8 1336 aaKnown RBP22.05■■□□□ 1.12
UBE2D3-213ENST00000502690 RIMBP2O15034 1052 aa22.04■■□□□ 1.12
UBE2D3-213ENST00000502690 GLIS2Q9BZE0 524 aaPredicted RBP22.04■■□□□ 1.12
UBE2D3-213ENST00000502690 KCNQ5Q9NR82 932 aa22.04■■□□□ 1.12
UBE2D3-213ENST00000502690 RTL9Q8NET4 1388 aa22.03■■□□□ 1.12
UBE2D3-213ENST00000502690 CALD1Q05682 793 aaKnown RBP22.03■■□□□ 1.12
UBE2D3-213ENST00000502690 CCDC85AQ96PX6 553 aaPredicted RBP22.03■■□□□ 1.12
UBE2D3-213ENST00000502690 BCL2L13Q9BXK5 485 aa22.03■■□□□ 1.12
UBE2D3-213ENST00000502690 CDHR2Q9BYE9 1310 aa22.03■■□□□ 1.12
UBE2D3-213ENST00000502690 PSMD14O00487 310 aa22.02■■□□□ 1.12
UBE2D3-213ENST00000502690 EGFRP00533 1210 aa22.02■■□□□ 1.12
UBE2D3-213ENST00000502690 WASHC4Q2M389 1173 aa22.02■■□□□ 1.12
UBE2D3-213ENST00000502690 CYP4F22Q6NT55 531 aa22.02■■□□□ 1.12
UBE2D3-213ENST00000502690 DLK2Q6UY11 383 aa22.02■■□□□ 1.12
UBE2D3-213ENST00000502690 ZNF646O15015 1829 aaPredicted RBP22.01■■□□□ 1.11
UBE2D3-213ENST00000502690 C6orf229H3BNL8 230 aa22.01■■□□□ 1.11
UBE2D3-213ENST00000502690 RPS8P62241 208 aaKnown RBP22.01■■□□□ 1.11
UBE2D3-213ENST00000502690 TNIP1Q15025 636 aa22.01■■□□□ 1.11
UBE2D3-213ENST00000502690 DOK7Q18PE1 504 aa22.01■■□□□ 1.11
UBE2D3-213ENST00000502690 MICALL2Q8IY33 904 aa22.01■■□□□ 1.11
UBE2D3-213ENST00000502690 TBC1D16Q8TBP0 767 aa22.01■■□□□ 1.11
UBE2D3-213ENST00000502690 METTL22Q9BUU2 404 aaPredicted RBP22.01■■□□□ 1.11
UBE2D3-213ENST00000502690 PGAP2Q9UHJ9 254 aa22.01■■□□□ 1.11
UBE2D3-213ENST00000502690 CNOT7Q9UIV1 285 aaKnown RBP22.01■■□□□ 1.11
UBE2D3-213ENST00000502690 ECE2O60344 883 aa22■■□□□ 1.11
UBE2D3-213ENST00000502690 PCCAP05165 728 aaPredicted RBP22■■□□□ 1.11
UBE2D3-213ENST00000502690 GRM1Q13255 1194 aa22■■□□□ 1.11
UBE2D3-213ENST00000502690 CCDC191Q8NCU4 936 aa22■■□□□ 1.11
UBE2D3-213ENST00000502690 CAPNS2Q96L46 248 aa22■■□□□ 1.11
UBE2D3-213ENST00000502690 TLL2Q9Y6L7 1015 aa22■■□□□ 1.11
UBE2D3-213ENST00000502690 IGKV5-2P06315 115 aa21.99■■□□□ 1.11
UBE2D3-213ENST00000502690 LBX1P52954 281 aa21.99■■□□□ 1.11
UBE2D3-213ENST00000502690 CCDC30Q5VVM6 783 aa21.99■■□□□ 1.11
UBE2D3-213ENST00000502690 PAXIP1Q6ZW49 1069 aaPredicted RBP21.99■■□□□ 1.11
UBE2D3-213ENST00000502690 SAMD7Q7Z3H4 446 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms