RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 WDR33Q9C0J8 1336 aaKnown RBP7.85□□□□□ -1.15
SPTA1-209ENST00000498708 PPEF1O14829 653 aaPredicted RBP7.85□□□□□ -1.15
SPTA1-209ENST00000498708 DEFB115Q30KQ5 88 aa7.85□□□□□ -1.15
SPTA1-209ENST00000498708 GRIPAP1Q4V328 841 aa7.85□□□□□ -1.15
SPTA1-209ENST00000498708 PRPF38BQ5VTL8 546 aaKnown RBP7.85□□□□□ -1.15
SPTA1-209ENST00000498708 NBPF6Q5VWK0 638 aa7.85□□□□□ -1.15
SPTA1-209ENST00000498708 NBPF4Q96M43 638 aa7.85□□□□□ -1.15
SPTA1-209ENST00000498708 RASSF10A6NK89 507 aa7.84□□□□□ -1.15
SPTA1-209ENST00000498708 NFKBIEO00221 500 aa7.84□□□□□ -1.15
SPTA1-209ENST00000498708 CYP27B1O15528 508 aa7.84□□□□□ -1.15
SPTA1-209ENST00000498708 PRR20EP86478 221 aa7.84□□□□□ -1.15
SPTA1-209ENST00000498708 PRR20CP86479 221 aa7.84□□□□□ -1.15
SPTA1-209ENST00000498708 PRR20DP86480 221 aa7.84□□□□□ -1.15
SPTA1-209ENST00000498708 PRR20BP86481 221 aa7.84□□□□□ -1.15
SPTA1-209ENST00000498708 PRR20AP86496 221 aa7.84□□□□□ -1.15
SPTA1-209ENST00000498708 DDR1Q08345 913 aa7.84□□□□□ -1.15
SPTA1-209ENST00000498708 MAP2K5Q13163 448 aa7.84□□□□□ -1.15
SPTA1-209ENST00000498708 NLRP7Q8WX94 980 aa7.84□□□□□ -1.15
SPTA1-209ENST00000498708 EMID1Q96A84 441 aaPredicted RBP7.84□□□□□ -1.15
SPTA1-209ENST00000498708 PHOX2BQ99453 314 aa7.84□□□□□ -1.15
SPTA1-209ENST00000498708 ASAP1Q9ULH1 1129 aa7.84□□□□□ -1.15
SPTA1-209ENST00000498708 RTCBQ9Y3I0 505 aaKnown RBP7.84□□□□□ -1.15
SPTA1-209ENST00000498708 SALL2Q9Y467 1007 aaPredicted RBP7.84□□□□□ -1.15
SPTA1-209ENST00000498708 LCE2BO14633 110 aa7.83□□□□□ -1.16
SPTA1-209ENST00000498708 DDNO94850 711 aaPredicted RBP7.83□□□□□ -1.16
SPTA1-209ENST00000498708 FMNL1O95466 1100 aaPredicted RBP7.83□□□□□ -1.16
SPTA1-209ENST00000498708 ZNF697Q5TEC3 545 aa7.83□□□□□ -1.16
SPTA1-209ENST00000498708 LIAT1Q6ZQX7 453 aa7.83□□□□□ -1.16
SPTA1-209ENST00000498708 TMC1Q8TDI8 760 aa7.83□□□□□ -1.16
SPTA1-209ENST00000498708 DICER1Q9UPY3 1922 aaKnown RBP7.83□□□□□ -1.16
SPTA1-209ENST00000498708 ROCK2O75116 1388 aaKnown RBP7.83□□□□□ -1.16
SPTA1-209ENST00000498708 SBNO2Q9Y2G9 1366 aa7.83□□□□□ -1.16
SPTA1-209ENST00000498708 HOXC9P31274 260 aa7.82□□□□□ -1.16
SPTA1-209ENST00000498708 RFC4P35249 363 aa7.82□□□□□ -1.16
SPTA1-209ENST00000498708 SOX10P56693 466 aa7.82□□□□□ -1.16
SPTA1-209ENST00000498708 TRIM67Q6ZTA4 783 aa7.82□□□□□ -1.16
SPTA1-209ENST00000498708 SLC4A9Q96Q91 983 aa7.82□□□□□ -1.16
SPTA1-209ENST00000498708 SRP68Q9UHB9 627 aaKnown RBP7.82□□□□□ -1.16
SPTA1-209ENST00000498708 MYH14Q7Z406 1995 aaKnown RBP7.82□□□□□ -1.16
SPTA1-209ENST00000498708 CD163L1Q9NR16 1453 aa7.81□□□□□ -1.16
SPTA1-209ENST00000498708 MAP3K19Q56UN5 1328 aa7.81□□□□□ -1.16
SPTA1-209ENST00000498708 PCDH11XQ9BZA7 1347 aa7.81□□□□□ -1.16
SPTA1-209ENST00000498708 PCDH11YQ9BZA8 1340 aa7.81□□□□□ -1.16
SPTA1-209ENST00000498708 IRF6O14896 467 aa7.81□□□□□ -1.16
SPTA1-209ENST00000498708 DGAT1O75907 488 aa7.81□□□□□ -1.16
SPTA1-209ENST00000498708 TATP17735 454 aaPredicted RBP7.81□□□□□ -1.16
SPTA1-209ENST00000498708 DGKZQ13574 1117 aa7.81□□□□□ -1.16
SPTA1-209ENST00000498708 PKDCCQ504Y2 493 aa7.81□□□□□ -1.16
SPTA1-209ENST00000498708 LDHDQ86WU2 507 aa7.81□□□□□ -1.16
SPTA1-209ENST00000498708 RAPGEF4Q8WZA2 1011 aa7.81□□□□□ -1.16
SPTA1-209ENST00000498708 THAP11Q96EK4 314 aa7.81□□□□□ -1.16
SPTA1-209ENST00000498708 SLC27A5Q9Y2P5 690 aa7.81□□□□□ -1.16
SPTA1-209ENST00000498708 LTBP1Q14766 1721 aa7.81□□□□□ -1.16
SPTA1-209ENST00000498708 CGNL1Q0VF96 1302 aa7.8□□□□□ -1.16
SPTA1-209ENST00000498708 RPIAP49247 311 aa7.8□□□□□ -1.16
SPTA1-209ENST00000498708 Q3C1V9 767 aa7.8□□□□□ -1.16
SPTA1-209ENST00000498708 ERFEQ4G0M1 354 aa7.8□□□□□ -1.16
SPTA1-209ENST00000498708 TAF1DQ9H5J8 278 aaPredicted RBP7.8□□□□□ -1.16
SPTA1-209ENST00000498708 ATG3Q9NT62 314 aa7.8□□□□□ -1.16
SPTA1-209ENST00000498708 ABT1Q9ULW3 272 aaKnown RBP7.8□□□□□ -1.16
SPTA1-209ENST00000498708 THSD7BQ9C0I4 1608 aa7.8□□□□□ -1.16
SPTA1-209ENST00000498708 SZT2Q5T011 3432 aa7.79□□□□□ -1.16
SPTA1-209ENST00000498708 POLRMTO00411 1230 aaKnown RBP7.79□□□□□ -1.16
SPTA1-209ENST00000498708 RPS6KA4O75676 772 aa7.79□□□□□ -1.16
SPTA1-209ENST00000498708 CD2BP2O95400 341 aaKnown RBP7.79□□□□□ -1.16
SPTA1-209ENST00000498708 AMPHP49418 695 aa7.79□□□□□ -1.16
SPTA1-209ENST00000498708 GRM1Q13255 1194 aa7.79□□□□□ -1.16
SPTA1-209ENST00000498708 CYP4F22Q6NT55 531 aa7.79□□□□□ -1.16
SPTA1-209ENST00000498708 CAPNS2Q96L46 248 aa7.79□□□□□ -1.16
SPTA1-209ENST00000498708 GPR101Q96P66 508 aaPredicted RBP7.79□□□□□ -1.16
SPTA1-209ENST00000498708 BEGAINQ9BUH8 593 aa7.79□□□□□ -1.16
SPTA1-209ENST00000498708 CARD11Q9BXL7 1154 aa7.79□□□□□ -1.16
SPTA1-209ENST00000498708 AFDNP55196 1824 aaKnown RBP7.79□□□□□ -1.16
SPTA1-209ENST00000498708 DLEC1Q9Y238 1755 aa7.79□□□□□ -1.16
SPTA1-209ENST00000498708 FER1L6Q2WGJ9 1857 aa7.79□□□□□ -1.16
SPTA1-209ENST00000498708 COL5A3P25940 1745 aaPredicted RBP7.78□□□□□ -1.16
SPTA1-209ENST00000498708 SCN4AP35499 1836 aa7.78□□□□□ -1.16
SPTA1-209ENST00000498708 AOC2O75106 756 aa7.78□□□□□ -1.16
SPTA1-209ENST00000498708 TM4SF1P30408 202 aa7.78□□□□□ -1.16
SPTA1-209ENST00000498708 FMR1Q06787 632 aaKnown RBP eCLIP7.78□□□□□ -1.16
SPTA1-209ENST00000498708 EAPPQ56P03 285 aaPredicted RBP7.78□□□□□ -1.16
SPTA1-209ENST00000498708 PLA2G2CQ5R387 149 aa7.78□□□□□ -1.16
SPTA1-209ENST00000498708 RC3H1Q5TC82 1133 aaKnown RBP7.78□□□□□ -1.16
SPTA1-209ENST00000498708 MAP1SQ66K74 1059 aaPredicted RBP7.78□□□□□ -1.16
SPTA1-209ENST00000498708 BRICD5Q6PL45 260 aa7.78□□□□□ -1.16
SPTA1-209ENST00000498708 HDGFL2Q7Z4V5 671 aaPredicted RBP7.78□□□□□ -1.16
SPTA1-209ENST00000498708 CNTROBQ8N137 903 aa7.78□□□□□ -1.16
SPTA1-209ENST00000498708 FAM160A2Q8N612 972 aaPredicted RBP7.78□□□□□ -1.16
SPTA1-209ENST00000498708 TTLL6Q8N841 843 aa7.78□□□□□ -1.16
SPTA1-209ENST00000498708 SLC12A5Q9H2X9 1139 aa7.78□□□□□ -1.16
SPTA1-209ENST00000498708 TMOD3Q9NYL9 352 aa7.78□□□□□ -1.16
SPTA1-209ENST00000498708 ADAMTSL1Q8N6G6 1762 aa7.77□□□□□ -1.17
SPTA1-209ENST00000498708 KDRP35968 1356 aa7.77□□□□□ -1.17
SPTA1-209ENST00000498708 GDF9O60383 454 aa7.77□□□□□ -1.17
SPTA1-209ENST00000498708 CD46P15529 392 aa7.77□□□□□ -1.17
SPTA1-209ENST00000498708 USP46P62068 366 aa7.77□□□□□ -1.17
SPTA1-209ENST00000498708 FCF1Q9Y324 198 aaKnown RBP7.77□□□□□ -1.17
SPTA1-209ENST00000498708 CNTNAP4Q9C0A0 1308 aa7.77□□□□□ -1.17
SPTA1-209ENST00000498708 KDM4AO75164 1064 aa7.76□□□□□ -1.17
SPTA1-209ENST00000498708 RRS1Q15050 365 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms