RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 DDX60Q8IY21 1712 aaKnown RBP14.88□□□□□ -0.03
MRPL55-234ENST00000497758 H7C1W4 665 aa14.87□□□□□ -0.03
MRPL55-234ENST00000497758 ALDH1L1O75891 902 aa14.87□□□□□ -0.03
MRPL55-234ENST00000497758 RARSP54136 660 aaKnown RBP14.87□□□□□ -0.03
MRPL55-234ENST00000497758 CTSWP56202 376 aa14.87□□□□□ -0.03
MRPL55-234ENST00000497758 FKBP4Q02790 459 aaKnown RBP eCLIP14.87□□□□□ -0.03
MRPL55-234ENST00000497758 TMC4Q7Z404 712 aa14.87□□□□□ -0.03
MRPL55-234ENST00000497758 ZNF526Q8TF50 670 aaPredicted RBP14.87□□□□□ -0.03
MRPL55-234ENST00000497758 ATP6V0A2Q9Y487 856 aa14.87□□□□□ -0.03
MRPL55-234ENST00000497758 LAMB2P55268 1798 aa14.87□□□□□ -0.03
MRPL55-234ENST00000497758 CCDC85AQ96PX6 553 aaPredicted RBP14.86□□□□□ -0.03
MRPL55-234ENST00000497758 C9orf78Q9NZ63 289 aaPredicted RBP14.86□□□□□ -0.03
MRPL55-234ENST00000497758 KIF16BQ96L93 1317 aa14.86□□□□□ -0.03
MRPL55-234ENST00000497758 GRM8O00222 908 aa14.85□□□□□ -0.03
MRPL55-234ENST00000497758 GPBP1L1Q9HC44 474 aaPredicted RBP14.85□□□□□ -0.03
MRPL55-234ENST00000497758 ZNF277Q9NRM2 450 aaPredicted RBP14.85□□□□□ -0.03
MRPL55-234ENST00000497758 NOB1Q9ULX3 412 aaKnown RBP14.85□□□□□ -0.03
MRPL55-234ENST00000497758 ZC3H4Q9UPT8 1303 aaKnown RBP14.85□□□□□ -0.03
MRPL55-234ENST00000497758 FER1L6Q2WGJ9 1857 aa14.84□□□□□ -0.03
MRPL55-234ENST00000497758 PRELPP51888 382 aa14.84□□□□□ -0.03
MRPL55-234ENST00000497758 BRPF1P55201 1214 aaPredicted RBP14.84□□□□□ -0.03
MRPL55-234ENST00000497758 RPS8P62241 208 aaKnown RBP14.84□□□□□ -0.03
MRPL55-234ENST00000497758 SP8Q8IXZ3 490 aa14.84□□□□□ -0.03
MRPL55-234ENST00000497758 CELF1Q92879 486 aaKnown RBP14.84□□□□□ -0.03
MRPL55-234ENST00000497758 CDC5LQ99459 802 aaKnown RBP14.84□□□□□ -0.03
MRPL55-234ENST00000497758 PSMD1Q99460 953 aa14.84□□□□□ -0.03
MRPL55-234ENST00000497758 API5Q9BZZ5 524 aaKnown RBP14.84□□□□□ -0.03
MRPL55-234ENST00000497758 SEC31BQ9NQW1 1179 aa14.84□□□□□ -0.03
MRPL55-234ENST00000497758 CASP7P55210 303 aa14.83□□□□□ -0.04
MRPL55-234ENST00000497758 DPP8Q6V1X1 898 aaPredicted RBP14.83□□□□□ -0.04
MRPL55-234ENST00000497758 ANKRD18AQ8IVF6 992 aa14.83□□□□□ -0.04
MRPL55-234ENST00000497758 TTLL11Q8NHH1 800 aa14.83□□□□□ -0.04
MRPL55-234ENST00000497758 PLA2G12BQ9BX93 195 aa14.83□□□□□ -0.04
MRPL55-234ENST00000497758 SBF1O95248 1867 aa14.82□□□□□ -0.04
MRPL55-234ENST00000497758 IPO8O15397 1037 aaKnown RBP14.82□□□□□ -0.04
MRPL55-234ENST00000497758 IARSP41252 1262 aaKnown RBP14.82□□□□□ -0.04
MRPL55-234ENST00000497758 SLC51AQ86UW1 340 aa14.82□□□□□ -0.04
MRPL55-234ENST00000497758 MPNDQ8N594 471 aa14.82□□□□□ -0.04
MRPL55-234ENST00000497758 SUPT20HQ8NEM7 779 aa14.82□□□□□ -0.04
MRPL55-234ENST00000497758 GREM2Q9H772 168 aa14.82□□□□□ -0.04
MRPL55-234ENST00000497758 KDM2BQ8NHM5 1336 aa14.82□□□□□ -0.04
MRPL55-234ENST00000497758 CCT4P50991 539 aaKnown RBP14.81□□□□□ -0.04
MRPL55-234ENST00000497758 JDP2Q8WYK2 163 aa14.81□□□□□ -0.04
MRPL55-234ENST00000497758 FRAT1Q92837 279 aaPredicted RBP14.81□□□□□ -0.04
MRPL55-234ENST00000497758 CHMP3Q9Y3E7 222 aa14.81□□□□□ -0.04
MRPL55-234ENST00000497758 RTL9Q8NET4 1388 aa14.81□□□□□ -0.04
MRPL55-234ENST00000497758 SNED1Q8TER0 1413 aa14.81□□□□□ -0.04
MRPL55-234ENST00000497758 BCAR3O75815 825 aa14.8□□□□□ -0.04
MRPL55-234ENST00000497758 FAM161AQ3B820 660 aa14.8□□□□□ -0.04
MRPL55-234ENST00000497758 DPY19L2Q6NUT2 758 aa14.8□□□□□ -0.04
MRPL55-234ENST00000497758 LARGE2Q8N3Y3 721 aa14.8□□□□□ -0.04
MRPL55-234ENST00000497758 ARHGAP45Q92619 1136 aa14.8□□□□□ -0.04
MRPL55-234ENST00000497758 NSFL1CQ9UNZ2 370 aaKnown RBP14.8□□□□□ -0.04
MRPL55-234ENST00000497758 PPIP5K2O43314 1243 aa14.79□□□□□ -0.04
MRPL55-234ENST00000497758 MYH3P11055 1940 aa14.79□□□□□ -0.04
MRPL55-234ENST00000497758 TAF1P21675 1872 aa14.79□□□□□ -0.04
MRPL55-234ENST00000497758 ITGA6P23229 1130 aa14.79□□□□□ -0.04
MRPL55-234ENST00000497758 IGHMBP2P38935 993 aaKnown RBP14.79□□□□□ -0.04
MRPL55-234ENST00000497758 TIAM2Q8IVF5 1701 aa14.79□□□□□ -0.04
MRPL55-234ENST00000497758 ANKIB1Q9P2G1 1089 aa14.79□□□□□ -0.04
MRPL55-234ENST00000497758 CCDC88AQ3V6T2 1871 aa14.78□□□□□ -0.04
MRPL55-234ENST00000497758 ANKRD18BA2A2Z9 1011 aa14.78□□□□□ -0.04
MRPL55-234ENST00000497758 GLTPD2A6NH11 291 aa14.78□□□□□ -0.04
MRPL55-234ENST00000497758 C6orf229H3BNL8 230 aa14.78□□□□□ -0.04
MRPL55-234ENST00000497758 CSF1RP07333 972 aa14.78□□□□□ -0.04
MRPL55-234ENST00000497758 NBPF7P0C2Y1 421 aaPredicted RBP14.78□□□□□ -0.04
MRPL55-234ENST00000497758 FOXO4P98177 505 aa14.78□□□□□ -0.04
MRPL55-234ENST00000497758 IFIT5Q13325 482 aaKnown RBP14.78□□□□□ -0.04
MRPL55-234ENST00000497758 LMBR1LQ6UX01 489 aa14.78□□□□□ -0.04
MRPL55-234ENST00000497758 NIM1KQ8IY84 436 aa14.78□□□□□ -0.04
MRPL55-234ENST00000497758 MPHOSPH8Q99549 860 aa14.78□□□□□ -0.04
MRPL55-234ENST00000497758 RTFDC1Q9BY42 306 aaPredicted RBP14.78□□□□□ -0.04
MRPL55-234ENST00000497758 VPS33BQ9H267 617 aa14.78□□□□□ -0.04
MRPL55-234ENST00000497758 UTYO14607 1347 aa14.77□□□□□ -0.04
MRPL55-234ENST00000497758 GPSM2P81274 684 aa14.77□□□□□ -0.05
MRPL55-234ENST00000497758 AOC3Q16853 763 aa14.77□□□□□ -0.05
MRPL55-234ENST00000497758 CCDC57Q2TAC2 916 aa14.77□□□□□ -0.05
MRPL55-234ENST00000497758 TAF7LQ5H9L4 462 aa14.77□□□□□ -0.05
MRPL55-234ENST00000497758 ATF7IPQ6VMQ6 1270 aa14.77□□□□□ -0.05
MRPL55-234ENST00000497758 SUCLG2Q96I99 432 aa14.77□□□□□ -0.05
MRPL55-234ENST00000497758 BSDC1Q9NW68 430 aaPredicted RBP14.77□□□□□ -0.05
MRPL55-234ENST00000497758 LRRC37AA6NMS7 1700 aa14.76□□□□□ -0.05
MRPL55-234ENST00000497758 UFL1O94874 794 aa14.76□□□□□ -0.05
MRPL55-234ENST00000497758 TRIM27P14373 513 aa14.76□□□□□ -0.05
MRPL55-234ENST00000497758 EPHA10Q5JZY3 1008 aa14.76□□□□□ -0.05
MRPL55-234ENST00000497758 ZKSCAN2Q63HK3 967 aa14.76□□□□□ -0.05
MRPL55-234ENST00000497758 EYA3Q99504 573 aa14.76□□□□□ -0.05
MRPL55-234ENST00000497758 USP44Q9H0E7 712 aa14.76□□□□□ -0.05
MRPL55-234ENST00000497758 NMRK2Q9NPI5 230 aa14.76□□□□□ -0.05
MRPL55-234ENST00000497758 GGA1Q9UJY5 639 aa14.76□□□□□ -0.05
MRPL55-234ENST00000497758 COL4A1P02462 1669 aa14.76□□□□□ -0.05
MRPL55-234ENST00000497758 DICER1Q9UPY3 1922 aaKnown RBP14.76□□□□□ -0.05
MRPL55-234ENST00000497758 XDHP47989 1333 aa14.75□□□□□ -0.05
MRPL55-234ENST00000497758 UBTFL1P0CB47 393 aaPredicted RBP14.75□□□□□ -0.05
MRPL55-234ENST00000497758 EIF6P56537 245 aaKnown RBP14.75□□□□□ -0.05
MRPL55-234ENST00000497758 KIAA2012Q0VF49 1180 aa14.75□□□□□ -0.05
MRPL55-234ENST00000497758 WASHC4Q2M389 1173 aa14.75□□□□□ -0.05
MRPL55-234ENST00000497758 C16orf71Q8IYS4 520 aaPredicted RBP14.75□□□□□ -0.05
MRPL55-234ENST00000497758 YTHDC1Q96MU7 727 aaKnown RBP14.75□□□□□ -0.05
MRPL55-234ENST00000497758 BICC1Q9H694 974 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms