RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 CNTROBQ8N137 903 aa22.21■■□□□ 1.15
SMC4-226ENST00000497311 HSPA1AP0DMV8 641 aaKnown RBP22.2■■□□□ 1.14
SMC4-226ENST00000497311 HSPA1BP0DMV9 641 aaKnown RBP22.2■■□□□ 1.14
SMC4-226ENST00000497311 SCNN1DP51172 638 aa22.2■■□□□ 1.14
SMC4-226ENST00000497311 TMC4Q7Z404 712 aa22.2■■□□□ 1.14
SMC4-226ENST00000497311 RIC3Q7Z5B4 369 aa22.2■■□□□ 1.14
SMC4-226ENST00000497311 ZNRF3Q9ULT6 936 aa22.2■■□□□ 1.14
SMC4-226ENST00000497311 EPS15P42566 896 aa22.19■■□□□ 1.14
SMC4-226ENST00000497311 GOLGA2Q08379 1002 aa22.19■■□□□ 1.14
SMC4-226ENST00000497311 TRIM28Q13263 835 aaKnown RBP22.19■■□□□ 1.14
SMC4-226ENST00000497311 COL13A1Q5TAT6 717 aaPredicted RBP22.19■■□□□ 1.14
SMC4-226ENST00000497311 SF3B3Q15393 1217 aaKnown RBP22.18■■□□□ 1.14
SMC4-226ENST00000497311 RTL5Q5HYW3 569 aaPredicted RBP22.18■■□□□ 1.14
SMC4-226ENST00000497311 PHAXQ9H814 394 aaKnown RBP22.18■■□□□ 1.14
SMC4-226ENST00000497311 TAF1P21675 1872 aa22.17■■□□□ 1.14
SMC4-226ENST00000497311 DDX60Q8IY21 1712 aaKnown RBP22.17■■□□□ 1.14
SMC4-226ENST00000497311 CNTNAP1P78357 1384 aa22.17■■□□□ 1.14
SMC4-226ENST00000497311 CXCL9Q07325 125 aa22.17■■□□□ 1.14
SMC4-226ENST00000497311 KIAA2012Q0VF49 1180 aa22.17■■□□□ 1.14
SMC4-226ENST00000497311 USP50Q70EL3 339 aaPredicted RBP22.17■■□□□ 1.14
SMC4-226ENST00000497311 CHMP4AQ9BY43 222 aa22.17■■□□□ 1.14
SMC4-226ENST00000497311 LTBP1Q14766 1721 aa22.17■■□□□ 1.14
SMC4-226ENST00000497311 C8orf58Q8NAV2 365 aa22.16■■□□□ 1.14
SMC4-226ENST00000497311 IRS4O14654 1257 aaPredicted RBP22.15■■□□□ 1.14
SMC4-226ENST00000497311 CCDC30Q5VVM6 783 aa22.15■■□□□ 1.14
SMC4-226ENST00000497311 CELF1Q92879 486 aaKnown RBP22.15■■□□□ 1.14
SMC4-226ENST00000497311 CCDC184Q52MB2 194 aa22.14■■□□□ 1.13
SMC4-226ENST00000497311 CIAPIN1Q6FI81 312 aa22.14■■□□□ 1.13
SMC4-226ENST00000497311 ZBTB38Q8NAP3 1195 aaPredicted RBP22.14■■□□□ 1.13
SMC4-226ENST00000497311 MYD88Q99836 296 aa22.14■■□□□ 1.13
SMC4-226ENST00000497311 ADARB2Q9NS39 739 aaKnown RBP22.14■■□□□ 1.13
SMC4-226ENST00000497311 GPRC5DQ9NZD1 345 aa22.14■■□□□ 1.13
SMC4-226ENST00000497311 HSP90B1P14625 803 aaKnown RBP22.13■■□□□ 1.13
SMC4-226ENST00000497311 RAD17O75943 681 aa22.12■■□□□ 1.13
SMC4-226ENST00000497311 DDX58O95786 925 aaKnown RBP22.12■■□□□ 1.13
SMC4-226ENST00000497311 VEGFBP49765 207 aa22.12■■□□□ 1.13
SMC4-226ENST00000497311 TNIP1Q15025 636 aa22.12■■□□□ 1.13
SMC4-226ENST00000497311 CCDC191Q8NCU4 936 aa22.12■■□□□ 1.13
SMC4-226ENST00000497311 NSFL1CQ9UNZ2 370 aaKnown RBP22.12■■□□□ 1.13
SMC4-226ENST00000497311 LRRC37AA6NMS7 1700 aa22.11■■□□□ 1.13
SMC4-226ENST00000497311 GMPSP49915 693 aaPredicted RBP22.11■■□□□ 1.13
SMC4-226ENST00000497311 WASHC4Q2M389 1173 aa22.11■■□□□ 1.13
SMC4-226ENST00000497311 BCL2L13Q9BXK5 485 aa22.11■■□□□ 1.13
SMC4-226ENST00000497311 RPS8P62241 208 aaKnown RBP22.1■■□□□ 1.13
SMC4-226ENST00000497311 CCDC27Q2M243 656 aa22.1■■□□□ 1.13
SMC4-226ENST00000497311 DEFB115Q30KQ5 88 aa22.1■■□□□ 1.13
SMC4-226ENST00000497311 TSPYL6Q8N831 410 aa22.1■■□□□ 1.13
SMC4-226ENST00000497311 METTL22Q9BUU2 404 aaPredicted RBP22.1■■□□□ 1.13
SMC4-226ENST00000497311 CDHR2Q9BYE9 1310 aa22.09■■□□□ 1.13
SMC4-226ENST00000497311 DUOX1Q9NRD9 1551 aa22.09■■□□□ 1.13
SMC4-226ENST00000497311 RASSF10A6NK89 507 aa22.09■■□□□ 1.13
SMC4-226ENST00000497311 C6orf229H3BNL8 230 aa22.09■■□□□ 1.13
SMC4-226ENST00000497311 PCCAP05165 728 aaPredicted RBP22.09■■□□□ 1.13
SMC4-226ENST00000497311 TNS4Q8IZW8 715 aa22.09■■□□□ 1.13
SMC4-226ENST00000497311 TSR2Q969E8 191 aaKnown RBP22.09■■□□□ 1.13
SMC4-226ENST00000497311 CWC25Q9NXE8 425 aaPredicted RBP22.09■■□□□ 1.13
SMC4-226ENST00000497311 ABT1Q9ULW3 272 aaKnown RBP22.09■■□□□ 1.13
SMC4-226ENST00000497311 YDJCA8MPS7 323 aa22.08■■□□□ 1.13
SMC4-226ENST00000497311 GPSM2P81274 684 aa22.08■■□□□ 1.13
SMC4-226ENST00000497311 WWC1Q8IX03 1113 aa22.08■■□□□ 1.13
SMC4-226ENST00000497311 FMR1Q06787 632 aaKnown RBP eCLIP22.07■■□□□ 1.126e-9■□□□□ 8.8
SMC4-226ENST00000497311 CCDC152Q4G0S7 254 aa22.07■■□□□ 1.12
SMC4-226ENST00000497311 EYA3Q99504 573 aa22.07■■□□□ 1.12
SMC4-226ENST00000497311 STK31Q9BXU1 1019 aa22.07■■□□□ 1.12
SMC4-226ENST00000497311 POLLQ9UGP5 575 aa22.07■■□□□ 1.12
SMC4-226ENST00000497311 MAP3K2Q9Y2U5 619 aa22.07■■□□□ 1.12
SMC4-226ENST00000497311 RIMBP2O15034 1052 aa22.06■■□□□ 1.12
SMC4-226ENST00000497311 PDE8AO60658 829 aa22.06■■□□□ 1.12
SMC4-226ENST00000497311 DBNDD1Q9H9R9 158 aa22.06■■□□□ 1.12
SMC4-226ENST00000497311 SEC31BQ9NQW1 1179 aa22.06■■□□□ 1.12
SMC4-226ENST00000497311 COL4A1P02462 1669 aa22.05■■□□□ 1.12
SMC4-226ENST00000497311 TRAF5O00463 557 aa22.05■■□□□ 1.12
SMC4-226ENST00000497311 KSR2Q6VAB6 950 aa22.05■■□□□ 1.12
SMC4-226ENST00000497311 JARID2Q92833 1246 aaPredicted RBP22.05■■□□□ 1.12
SMC4-226ENST00000497311 AIDAQ96BJ3 306 aa22.05■■□□□ 1.12
SMC4-226ENST00000497311 MRS2Q9HD23 443 aa22.05■■□□□ 1.12
SMC4-226ENST00000497311 CNOT7Q9UIV1 285 aaKnown RBP22.05■■□□□ 1.12
SMC4-226ENST00000497311 PI4KAP2A4QPH2 592 aa22.04■■□□□ 1.12
SMC4-226ENST00000497311 H7C1D1 291 aa22.04■■□□□ 1.12
SMC4-226ENST00000497311 FOXN1O15353 648 aa22.04■■□□□ 1.12
SMC4-226ENST00000497311 TWISTNBQ3B726 338 aaPredicted RBP22.04■■□□□ 1.12
SMC4-226ENST00000497311 PI4KAP1Q8N8J0 262 aa22.04■■□□□ 1.12
SMC4-226ENST00000497311 TBC1D16Q8TBP0 767 aa22.04■■□□□ 1.12
SMC4-226ENST00000497311 IL16Q14005 1332 aa22.04■■□□□ 1.12
SMC4-226ENST00000497311 WDR33Q9C0J8 1336 aaKnown RBP22.04■■□□□ 1.12
SMC4-226ENST00000497311 TRPM7Q96QT4 1865 aa22.03■■□□□ 1.12
SMC4-226ENST00000497311 PSMD14O00487 310 aa22.03■■□□□ 1.12
SMC4-226ENST00000497311 ANP32CO43423 234 aa22.03■■□□□ 1.12
SMC4-226ENST00000497311 NCBP3Q53F19 620 aaKnown RBP22.03■■□□□ 1.12
SMC4-226ENST00000497311 CST9Q5W186 159 aa22.03■■□□□ 1.12
SMC4-226ENST00000497311 ZC3H15Q8WU90 426 aaKnown RBP22.03■■□□□ 1.12
SMC4-226ENST00000497311 PODXL2Q9NZ53 605 aa22.03■■□□□ 1.12
SMC4-226ENST00000497311 ANKIB1Q9P2G1 1089 aa22.03■■□□□ 1.12
SMC4-226ENST00000497311 PGAP2Q9UHJ9 254 aa22.03■■□□□ 1.12
SMC4-226ENST00000497311 ZBTB12Q9Y330 459 aaPredicted RBP22.03■■□□□ 1.12
SMC4-226ENST00000497311 ECE2O60344 883 aa22.02■■□□□ 1.12
SMC4-226ENST00000497311 HIRAP54198 1017 aaPredicted RBP22.02■■□□□ 1.12
SMC4-226ENST00000497311 NEXNQ0ZGT2 675 aa22.02■■□□□ 1.12
SMC4-226ENST00000497311 DOK7Q18PE1 504 aa22.02■■□□□ 1.12
SMC4-226ENST00000497311 MICALL2Q8IY33 904 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms