RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 IRS4O14654 1257 aaPredicted RBP19.46■□□□□ 0.71
NEK4-206ENST00000496822 EPHX2P34913 555 aa19.46■□□□□ 0.71
NEK4-206ENST00000496822 EIF6P56537 245 aaKnown RBP19.46■□□□□ 0.71
NEK4-206ENST00000496822 SF3B3Q15393 1217 aaKnown RBP19.46■□□□□ 0.71
NEK4-206ENST00000496822 EAPPQ56P03 285 aaPredicted RBP19.46■□□□□ 0.71
NEK4-206ENST00000496822 DPP8Q6V1X1 898 aaPredicted RBP19.46■□□□□ 0.71
NEK4-206ENST00000496822 LDHDQ86WU2 507 aa19.46■□□□□ 0.71
NEK4-206ENST00000496822 NIM1KQ8IY84 436 aa19.46■□□□□ 0.71
NEK4-206ENST00000496822 CELF1Q92879 486 aaKnown RBP19.46■□□□□ 0.71
NEK4-206ENST00000496822 TMX4Q9H1E5 349 aaPredicted RBP19.46■□□□□ 0.71
NEK4-206ENST00000496822 SALL2Q9Y467 1007 aaPredicted RBP19.46■□□□□ 0.71
NEK4-206ENST00000496822 IL16Q14005 1332 aa19.46■□□□□ 0.71
NEK4-206ENST00000496822 TWISTNBQ3B726 338 aaPredicted RBP19.45■□□□□ 0.7
NEK4-206ENST00000496822 MPNDQ8N594 471 aa19.45■□□□□ 0.7
NEK4-206ENST00000496822 ZBTB38Q8NAP3 1195 aaPredicted RBP19.45■□□□□ 0.7
NEK4-206ENST00000496822 NCBP3Q53F19 620 aaKnown RBP19.44■□□□□ 0.7
NEK4-206ENST00000496822 JARID2Q92833 1246 aaPredicted RBP19.44■□□□□ 0.7
NEK4-206ENST00000496822 METTL22Q9BUU2 404 aaPredicted RBP19.44■□□□□ 0.7
NEK4-206ENST00000496822 MAP3K2Q9Y2U5 619 aa19.44■□□□□ 0.7
NEK4-206ENST00000496822 FANCIQ9NVI1 1328 aa19.44■□□□□ 0.7
NEK4-206ENST00000496822 SCNN1DP51172 638 aa19.43■□□□□ 0.7
NEK4-206ENST00000496822 G2E3Q7L622 706 aa19.43■□□□□ 0.7
NEK4-206ENST00000496822 SUPT20HQ8NEM7 779 aa19.43■□□□□ 0.7
NEK4-206ENST00000496822 DDX58O95786 925 aaKnown RBP19.42■□□□□ 0.7
NEK4-206ENST00000496822 KIAA2012Q0VF49 1180 aa19.42■□□□□ 0.7
NEK4-206ENST00000496822 JMYQ8N9B5 988 aa19.42■□□□□ 0.7
NEK4-206ENST00000496822 CCDC191Q8NCU4 936 aa19.42■□□□□ 0.7
NEK4-206ENST00000496822 VPS33BQ9H267 617 aa19.42■□□□□ 0.7
NEK4-206ENST00000496822 CWC25Q9NXE8 425 aaPredicted RBP19.42■□□□□ 0.7
NEK4-206ENST00000496822 PASKQ96RG2 1323 aa19.42■□□□□ 0.7
NEK4-206ENST00000496822 PI4KAP2A4QPH2 592 aa19.41■□□□□ 0.7
NEK4-206ENST00000496822 PCCAP05165 728 aaPredicted RBP19.41■□□□□ 0.7
NEK4-206ENST00000496822 IGKV5-2P06315 115 aa19.41■□□□□ 0.7
NEK4-206ENST00000496822 EPS15P42566 896 aa19.41■□□□□ 0.7
NEK4-206ENST00000496822 KSR2Q6VAB6 950 aa19.41■□□□□ 0.7
NEK4-206ENST00000496822 TMC4Q7Z404 712 aa19.41■□□□□ 0.7
NEK4-206ENST00000496822 PI4KAP1Q8N8J0 262 aa19.41■□□□□ 0.7
NEK4-206ENST00000496822 STK31Q9BXU1 1019 aa19.41■□□□□ 0.7
NEK4-206ENST00000496822 CHMP4AQ9BY43 222 aa19.41■□□□□ 0.7
NEK4-206ENST00000496822 ZNRF3Q9ULT6 936 aa19.41■□□□□ 0.7
NEK4-206ENST00000496822 CLEC11AQ9Y240 323 aa19.41■□□□□ 0.7
NEK4-206ENST00000496822 CXCL9Q07325 125 aa19.4■□□□□ 0.7
NEK4-206ENST00000496822 SEC31BQ9NQW1 1179 aa19.4■□□□□ 0.7
NEK4-206ENST00000496822 ITGBL1O95965 494 aaPredicted RBP19.39■□□□□ 0.69
NEK4-206ENST00000496822 LMOD1P29536 600 aaPredicted RBP19.39■□□□□ 0.69
NEK4-206ENST00000496822 GPSM2P81274 684 aa19.39■□□□□ 0.69
NEK4-206ENST00000496822 MAP1SQ66K74 1059 aaPredicted RBP19.39■□□□□ 0.69
NEK4-206ENST00000496822 PNMA8AQ86V59 439 aaPredicted RBP19.39■□□□□ 0.69
NEK4-206ENST00000496822 FAM9BQ8IZU0 186 aa19.39■□□□□ 0.69
NEK4-206ENST00000496822 CCDC85AQ96PX6 553 aaPredicted RBP19.39■□□□□ 0.69
NEK4-206ENST00000496822 SPINK5Q9NQ38 1064 aaPredicted RBP19.39■□□□□ 0.69
NEK4-206ENST00000496822 CREBZFQ9NS37 354 aa19.39■□□□□ 0.69
NEK4-206ENST00000496822 SLC4A2P04920 1241 aa19.38■□□□□ 0.69
NEK4-206ENST00000496822 CWF19L2Q2TBE0 894 aaKnown RBP19.38■□□□□ 0.69
NEK4-206ENST00000496822 WDR63Q8IWG1 891 aa19.38■□□□□ 0.69
NEK4-206ENST00000496822 YDJCA8MPS7 323 aa19.37■□□□□ 0.69
NEK4-206ENST00000496822 PDE8AO60658 829 aa19.37■□□□□ 0.69
NEK4-206ENST00000496822 RAD17O75943 681 aa19.37■□□□□ 0.69
NEK4-206ENST00000496822 RPS8P62241 208 aaKnown RBP19.37■□□□□ 0.69
NEK4-206ENST00000496822 GPR101Q96P66 508 aaPredicted RBP19.37■□□□□ 0.69
NEK4-206ENST00000496822 NSFL1CQ9UNZ2 370 aaKnown RBP19.37■□□□□ 0.69
NEK4-206ENST00000496822 CDHR2Q9BYE9 1310 aa19.36■□□□□ 0.69
NEK4-206ENST00000496822 EXOSC9Q06265 439 aaKnown RBP19.36■□□□□ 0.69
NEK4-206ENST00000496822 FLIIQ13045 1269 aa19.36■□□□□ 0.69
NEK4-206ENST00000496822 CNTROBQ8N137 903 aa19.36■□□□□ 0.69
NEK4-206ENST00000496822 GPRC5DQ9NZD1 345 aa19.36■□□□□ 0.69
NEK4-206ENST00000496822 POLLQ9UGP5 575 aa19.36■□□□□ 0.69
NEK4-206ENST00000496822 NEURL1BA8MQ27 555 aa19.35■□□□□ 0.69
NEK4-206ENST00000496822 VAMP4O75379 141 aa19.35■□□□□ 0.69
NEK4-206ENST00000496822 GMPSP49915 693 aaPredicted RBP19.35■□□□□ 0.69
NEK4-206ENST00000496822 CCDC152Q4G0S7 254 aa19.35■□□□□ 0.69
NEK4-206ENST00000496822 CIAPIN1Q6FI81 312 aa19.35■□□□□ 0.69
NEK4-206ENST00000496822 MKRN1Q9UHC7 482 aaKnown RBP19.35■□□□□ 0.69
NEK4-206ENST00000496822 C6orf229H3BNL8 230 aa19.34■□□□□ 0.69
NEK4-206ENST00000496822 RIMBP2O15034 1052 aa19.34■□□□□ 0.69
NEK4-206ENST00000496822 HSP90B1P14625 803 aaKnown RBP19.34■□□□□ 0.69
NEK4-206ENST00000496822 CTSWP56202 376 aa19.34■□□□□ 0.69
NEK4-206ENST00000496822 NEXNQ0ZGT2 675 aa19.34■□□□□ 0.69
NEK4-206ENST00000496822 WASHC4Q2M389 1173 aa19.34■□□□□ 0.69
NEK4-206ENST00000496822 TBC1D16Q8TBP0 767 aa19.34■□□□□ 0.69
NEK4-206ENST00000496822 DBNDD1Q9H9R9 158 aa19.34■□□□□ 0.69
NEK4-206ENST00000496822 PCNTO95613 3336 aa19.33■□□□□ 0.69
NEK4-206ENST00000496822 FMR1Q06787 632 aaKnown RBP eCLIP19.33■□□□□ 0.68
NEK4-206ENST00000496822 SHTN1A0MZ66 631 aa19.32■□□□□ 0.68
NEK4-206ENST00000496822 TMEM88BA6NKF7 163 aa19.32■□□□□ 0.68
NEK4-206ENST00000496822 FKBP5Q13451 457 aaPredicted RBP19.32■□□□□ 0.68
NEK4-206ENST00000496822 USP50Q70EL3 339 aaPredicted RBP19.32■□□□□ 0.68
NEK4-206ENST00000496822 ADARB2Q9NS39 739 aaKnown RBP19.32■□□□□ 0.68
NEK4-206ENST00000496822 CNTNAP1P78357 1384 aa19.32■□□□□ 0.68
NEK4-206ENST00000496822 TNIP1Q15025 636 aa19.31■□□□□ 0.68
NEK4-206ENST00000496822 DOK7Q18PE1 504 aa19.31■□□□□ 0.68
NEK4-206ENST00000496822 UBE3BQ7Z3V4 1068 aa19.31■□□□□ 0.68
NEK4-206ENST00000496822 PODXL2Q9NZ53 605 aa19.31■□□□□ 0.68
NEK4-206ENST00000496822 H7C1W4 665 aa19.3■□□□□ 0.68
NEK4-206ENST00000496822 PSMD14O00487 310 aa19.3■□□□□ 0.68
NEK4-206ENST00000496822 ECE2O60344 883 aa19.3■□□□□ 0.68
NEK4-206ENST00000496822 UFL1O94874 794 aa19.3■□□□□ 0.68
NEK4-206ENST00000496822 ANKRD18AQ8IVF6 992 aa19.3■□□□□ 0.68
NEK4-206ENST00000496822 TTLL11Q8NHH1 800 aa19.3■□□□□ 0.68
NEK4-206ENST00000496822 TRPM4Q8TD43 1214 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms