RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 PRELPP51888 382 aa28.84■■■□□ 2.21
CHRD-217ENST00000496527 FER1L6Q2WGJ9 1857 aa28.84■■■□□ 2.21
CHRD-217ENST00000496527 FKBP4Q02790 459 aaKnown RBP eCLIP28.83■■■□□ 2.21
CHRD-217ENST00000496527 CCDC152Q4G0S7 254 aa28.83■■■□□ 2.21
CHRD-217ENST00000496527 GRIPAP1Q4V328 841 aa28.83■■■□□ 2.21
CHRD-217ENST00000496527 ATP6V0A2Q9Y487 856 aa28.83■■■□□ 2.21
CHRD-217ENST00000496527 SBF1O95248 1867 aa28.83■■■□□ 2.2
CHRD-217ENST00000496527 RARSP54136 660 aaKnown RBP28.82■■■□□ 2.2
CHRD-217ENST00000496527 SRCIN1Q9C0H9 1055 aa28.82■■■□□ 2.2
CHRD-217ENST00000496527 ALDH1L1O75891 902 aa28.81■■■□□ 2.2
CHRD-217ENST00000496527 CTSWP56202 376 aa28.8■■■□□ 2.2
CHRD-217ENST00000496527 TMC4Q7Z404 712 aa28.8■■■□□ 2.2
CHRD-217ENST00000496527 SP8Q8IXZ3 490 aa28.8■■■□□ 2.2
CHRD-217ENST00000496527 BRPF1P55201 1214 aaPredicted RBP28.79■■■□□ 2.2
CHRD-217ENST00000496527 ZNF526Q8TF50 670 aaPredicted RBP28.79■■■□□ 2.2
CHRD-217ENST00000496527 CELF1Q92879 486 aaKnown RBP28.79■■■□□ 2.2
CHRD-217ENST00000496527 CCDC85AQ96PX6 553 aaPredicted RBP28.79■■■□□ 2.2
CHRD-217ENST00000496527 CASP7P55210 303 aa28.78■■■□□ 2.2
CHRD-217ENST00000496527 PSMD1Q99460 953 aa28.78■■■□□ 2.2
CHRD-217ENST00000496527 NOB1Q9ULX3 412 aaKnown RBP28.78■■■□□ 2.2
CHRD-217ENST00000496527 ZC3H4Q9UPT8 1303 aaKnown RBP28.77■■■□□ 2.2
CHRD-217ENST00000496527 RPS8P62241 208 aaKnown RBP28.77■■■□□ 2.2
CHRD-217ENST00000496527 SLC51AQ86UW1 340 aa28.77■■■□□ 2.2
CHRD-217ENST00000496527 TTLL11Q8NHH1 800 aa28.77■■■□□ 2.2
CHRD-217ENST00000496527 PLA2G12BQ9BX93 195 aa28.77■■■□□ 2.2
CHRD-217ENST00000496527 GPBP1L1Q9HC44 474 aaPredicted RBP28.77■■■□□ 2.2
CHRD-217ENST00000496527 SEC31BQ9NQW1 1179 aa28.77■■■□□ 2.2
CHRD-217ENST00000496527 ZNF277Q9NRM2 450 aaPredicted RBP28.77■■■□□ 2.2
CHRD-217ENST00000496527 C9orf78Q9NZ63 289 aaPredicted RBP28.77■■■□□ 2.2
CHRD-217ENST00000496527 GRM8O00222 908 aa28.76■■■□□ 2.19
CHRD-217ENST00000496527 CCDC88AQ3V6T2 1871 aa28.76■■■□□ 2.19
CHRD-217ENST00000496527 SNED1Q8TER0 1413 aa28.76■■■□□ 2.19
CHRD-217ENST00000496527 TAF1P21675 1872 aa28.74■■■□□ 2.19
CHRD-217ENST00000496527 KIF16BQ96L93 1317 aa28.73■■■□□ 2.19
CHRD-217ENST00000496527 IARSP41252 1262 aaKnown RBP28.73■■■□□ 2.19
CHRD-217ENST00000496527 DPP8Q6V1X1 898 aaPredicted RBP28.73■■■□□ 2.19
CHRD-217ENST00000496527 MPNDQ8N594 471 aa28.73■■■□□ 2.19
CHRD-217ENST00000496527 API5Q9BZZ5 524 aaKnown RBP28.73■■■□□ 2.19
CHRD-217ENST00000496527 ANKRD18AQ8IVF6 992 aa28.72■■■□□ 2.19
CHRD-217ENST00000496527 CDC5LQ99459 802 aaKnown RBP28.72■■■□□ 2.19
CHRD-217ENST00000496527 GREM2Q9H772 168 aa28.72■■■□□ 2.19
CHRD-217ENST00000496527 SUPT20HQ8NEM7 779 aa28.71■■■□□ 2.19
CHRD-217ENST00000496527 KDM2BQ8NHM5 1336 aa28.7■■■□□ 2.19
CHRD-217ENST00000496527 MYH3P11055 1940 aa28.7■■■□□ 2.18
CHRD-217ENST00000496527 RTL9Q8NET4 1388 aa28.7■■■□□ 2.18
CHRD-217ENST00000496527 CSF1RP07333 972 aa28.69■■■□□ 2.18
CHRD-217ENST00000496527 ARHGAP45Q92619 1136 aa28.69■■■□□ 2.18
CHRD-217ENST00000496527 RTFDC1Q9BY42 306 aaPredicted RBP28.69■■■□□ 2.18
CHRD-217ENST00000496527 DICER1Q9UPY3 1922 aaKnown RBP28.69■■■□□ 2.18
CHRD-217ENST00000496527 IPO8O15397 1037 aaKnown RBP28.68■■■□□ 2.18
CHRD-217ENST00000496527 BCAR3O75815 825 aa28.68■■■□□ 2.18
CHRD-217ENST00000496527 DPY19L2Q6NUT2 758 aa28.68■■■□□ 2.18
CHRD-217ENST00000496527 JDP2Q8WYK2 163 aa28.68■■■□□ 2.18
CHRD-217ENST00000496527 NSFL1CQ9UNZ2 370 aaKnown RBP28.68■■■□□ 2.18
CHRD-217ENST00000496527 TIAM2Q8IVF5 1701 aa28.68■■■□□ 2.18
CHRD-217ENST00000496527 COL4A1P02462 1669 aa28.67■■■□□ 2.18
CHRD-217ENST00000496527 GLTPD2A6NH11 291 aa28.67■■■□□ 2.18
CHRD-217ENST00000496527 CCT4P50991 539 aaKnown RBP28.67■■■□□ 2.18
CHRD-217ENST00000496527 FOXO4P98177 505 aa28.67■■■□□ 2.18
CHRD-217ENST00000496527 LARGE2Q8N3Y3 721 aa28.67■■■□□ 2.18
CHRD-217ENST00000496527 NBPF7P0C2Y1 421 aaPredicted RBP28.66■■■□□ 2.18
CHRD-217ENST00000496527 ITGA6P23229 1130 aa28.66■■■□□ 2.18
CHRD-217ENST00000496527 FAM161AQ3B820 660 aa28.66■■■□□ 2.18
CHRD-217ENST00000496527 VPS33BQ9H267 617 aa28.66■■■□□ 2.18
CHRD-217ENST00000496527 CHMP3Q9Y3E7 222 aa28.66■■■□□ 2.18
CHRD-217ENST00000496527 UTYO14607 1347 aa28.66■■■□□ 2.18
CHRD-217ENST00000496527 PPIP5K2O43314 1243 aa28.65■■■□□ 2.18
CHRD-217ENST00000496527 GPSM2P81274 684 aa28.65■■■□□ 2.18
CHRD-217ENST00000496527 FRAT1Q92837 279 aaPredicted RBP28.65■■■□□ 2.18
CHRD-217ENST00000496527 LRRC37AA6NMS7 1700 aa28.64■■■□□ 2.18
CHRD-217ENST00000496527 IGHMBP2P38935 993 aaKnown RBP28.64■■■□□ 2.18
CHRD-217ENST00000496527 EPHA10Q5JZY3 1008 aa28.64■■■□□ 2.18
CHRD-217ENST00000496527 LMBR1LQ6UX01 489 aa28.64■■■□□ 2.18
CHRD-217ENST00000496527 ANKRD18BA2A2Z9 1011 aa28.63■■■□□ 2.17
CHRD-217ENST00000496527 AOC3Q16853 763 aa28.63■■■□□ 2.17
CHRD-217ENST00000496527 SUCLG2Q96I99 432 aa28.63■■■□□ 2.17
CHRD-217ENST00000496527 USP44Q9H0E7 712 aa28.63■■■□□ 2.17
CHRD-217ENST00000496527 NMRK2Q9NPI5 230 aa28.63■■■□□ 2.17
CHRD-217ENST00000496527 BSDC1Q9NW68 430 aaPredicted RBP28.63■■■□□ 2.17
CHRD-217ENST00000496527 ANKIB1Q9P2G1 1089 aa28.63■■■□□ 2.17
CHRD-217ENST00000496527 IFIT5Q13325 482 aaKnown RBP28.62■■■□□ 2.17
CHRD-217ENST00000496527 C6orf229H3BNL8 230 aa28.61■■■□□ 2.17
CHRD-217ENST00000496527 ATF7IPQ6VMQ6 1270 aa28.61■■■□□ 2.17
CHRD-217ENST00000496527 NIM1KQ8IY84 436 aa28.61■■■□□ 2.17
CHRD-217ENST00000496527 MPHOSPH8Q99549 860 aa28.61■■■□□ 2.17
CHRD-217ENST00000496527 FZD9O00144 591 aa28.6■■■□□ 2.17
CHRD-217ENST00000496527 KIAA2012Q0VF49 1180 aa28.6■■■□□ 2.17
CHRD-217ENST00000496527 RRAGCQ9HB90 399 aa28.6■■■□□ 2.17
CHRD-217ENST00000496527 PODXL2Q9NZ53 605 aa28.6■■■□□ 2.17
CHRD-217ENST00000496527 POLLQ9UGP5 575 aa28.6■■■□□ 2.17
CHRD-217ENST00000496527 TRIM27P14373 513 aa28.59■■■□□ 2.17
CHRD-217ENST00000496527 WASHC4Q2M389 1173 aa28.59■■■□□ 2.17
CHRD-217ENST00000496527 CCDC57Q2TAC2 916 aa28.59■■■□□ 2.17
CHRD-217ENST00000496527 KAZALD1Q96I82 304 aa28.59■■■□□ 2.17
CHRD-217ENST00000496527 EYA3Q99504 573 aa28.59■■■□□ 2.17
CHRD-217ENST00000496527 KIF3CO14782 793 aa28.58■■■□□ 2.17
CHRD-217ENST00000496527 DDNO94850 711 aaPredicted RBP28.58■■■□□ 2.17
CHRD-217ENST00000496527 EIF6P56537 245 aaKnown RBP28.58■■■□□ 2.17
CHRD-217ENST00000496527 ZKSCAN2Q63HK3 967 aa28.58■■■□□ 2.17
CHRD-217ENST00000496527 TBC1D16Q8TBP0 767 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms