RNA–Protein interactions for RNA: ENST00000496358.1

COPS6-210, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 610 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-210ENST00000496358 GRAPLQ8TC17 118 aaPredicted RBP23.36■■□□□ 1.33
COPS6-210ENST00000496358 CDHR2Q9BYE9 1310 aa23.35■■□□□ 1.33
COPS6-210ENST00000496358 MRPL50Q8N5N7 158 aaKnown RBP23.35■■□□□ 1.33
COPS6-210ENST00000496358 ATP6V0A2Q9Y487 856 aa23.35■■□□□ 1.33
COPS6-210ENST00000496358 MYH3P11055 1940 aa23.35■■□□□ 1.33
COPS6-210ENST00000496358 HSPA6P17066 643 aa23.34■■□□□ 1.33
COPS6-210ENST00000496358 GCKRQ14397 625 aa23.34■■□□□ 1.33
COPS6-210ENST00000496358 SSH1Q8WYL5 1049 aa23.34■■□□□ 1.33
COPS6-210ENST00000496358 ZNF277Q9NRM2 450 aaPredicted RBP23.34■■□□□ 1.33
COPS6-210ENST00000496358 UBE3BQ7Z3V4 1068 aa23.33■■□□□ 1.33
COPS6-210ENST00000496358 SP8Q8IXZ3 490 aa23.33■■□□□ 1.33
COPS6-210ENST00000496358 PSMD1Q99460 953 aa23.33■■□□□ 1.33
COPS6-210ENST00000496358 KDM2BQ8NHM5 1336 aa23.33■■□□□ 1.32
COPS6-210ENST00000496358 H7C1W4 665 aa23.32■■□□□ 1.32
COPS6-210ENST00000496358 CT47B1P0C2W7 299 aaPredicted RBP23.32■■□□□ 1.32
COPS6-210ENST00000496358 ALDH1L2Q3SY69 923 aa23.32■■□□□ 1.32
COPS6-210ENST00000496358 CCDC152Q4G0S7 254 aa23.32■■□□□ 1.32
COPS6-210ENST00000496358 TMC4Q7Z404 712 aa23.32■■□□□ 1.32
COPS6-210ENST00000496358 SLC51AQ86UW1 340 aa23.32■■□□□ 1.32
COPS6-210ENST00000496358 SNED1Q8TER0 1413 aa23.32■■□□□ 1.32
COPS6-210ENST00000496358 BEND3Q5T5X7 828 aa23.31■■□□□ 1.32
COPS6-210ENST00000496358 SLC4A10Q6U841 1118 aa23.31■■□□□ 1.32
COPS6-210ENST00000496358 CELF1Q92879 486 aaKnown RBP23.31■■□□□ 1.32
COPS6-210ENST00000496358 BCL2L13Q9BXK5 485 aa23.31■■□□□ 1.32
COPS6-210ENST00000496358 IARSP41252 1262 aaKnown RBP23.3■■□□□ 1.32
COPS6-210ENST00000496358 DPY19L2Q6NUT2 758 aa23.3■■□□□ 1.32
COPS6-210ENST00000496358 CCDC85AQ96PX6 553 aaPredicted RBP23.3■■□□□ 1.32
COPS6-210ENST00000496358 SMC4Q9NTJ3 1288 aa23.3■■□□□ 1.32
COPS6-210ENST00000496358 GLTPD2A6NH11 291 aa23.29■■□□□ 1.32
COPS6-210ENST00000496358 SEC31BQ9NQW1 1179 aa23.29■■□□□ 1.32
COPS6-210ENST00000496358 PTPRCP08575 1304 aa23.29■■□□□ 1.32
COPS6-210ENST00000496358 CTSWP56202 376 aa23.28■■□□□ 1.32
COPS6-210ENST00000496358 RPS8P62241 208 aaKnown RBP23.28■■□□□ 1.32
COPS6-210ENST00000496358 DPP8Q6V1X1 898 aaPredicted RBP23.28■■□□□ 1.32
COPS6-210ENST00000496358 MPNDQ8N594 471 aa23.28■■□□□ 1.32
COPS6-210ENST00000496358 NMRK2Q9NPI5 230 aa23.28■■□□□ 1.32
COPS6-210ENST00000496358 SRCIN1Q9C0H9 1055 aa23.27■■□□□ 1.32
COPS6-210ENST00000496358 LRRC37AA6NMS7 1700 aa23.26■■□□□ 1.31
COPS6-210ENST00000496358 ALDH1L1O75891 902 aa23.26■■□□□ 1.31
COPS6-210ENST00000496358 SUPT20HQ8NEM7 779 aa23.26■■□□□ 1.31
COPS6-210ENST00000496358 TTLL11Q8NHH1 800 aa23.26■■□□□ 1.31
COPS6-210ENST00000496358 JDP2Q8WYK2 163 aa23.26■■□□□ 1.31
COPS6-210ENST00000496358 RRAGCQ9HB90 399 aa23.26■■□□□ 1.31
COPS6-210ENST00000496358 COL4A1P02462 1669 aa23.25■■□□□ 1.31
COPS6-210ENST00000496358 KIF3CO14782 793 aa23.25■■□□□ 1.31
COPS6-210ENST00000496358 CASP7P55210 303 aa23.25■■□□□ 1.31
COPS6-210ENST00000496358 LARGE2Q8N3Y3 721 aa23.25■■□□□ 1.31
COPS6-210ENST00000496358 PLA2G12BQ9BX93 195 aa23.25■■□□□ 1.31
COPS6-210ENST00000496358 C9orf78Q9NZ63 289 aaPredicted RBP23.25■■□□□ 1.31
COPS6-210ENST00000496358 GRM8O00222 908 aa23.23■■□□□ 1.31
COPS6-210ENST00000496358 PPIP5K2O43314 1243 aa23.23■■□□□ 1.31
COPS6-210ENST00000496358 ANKRD18AQ8IVF6 992 aa23.23■■□□□ 1.31
COPS6-210ENST00000496358 CDC5LQ99459 802 aaKnown RBP23.23■■□□□ 1.31
COPS6-210ENST00000496358 RTFDC1Q9BY42 306 aaPredicted RBP23.23■■□□□ 1.31
COPS6-210ENST00000496358 GREM2Q9H772 168 aa23.23■■□□□ 1.31
COPS6-210ENST00000496358 NSFL1CQ9UNZ2 370 aaKnown RBP23.23■■□□□ 1.31
COPS6-210ENST00000496358 SPEF2Q9C093 1822 aa23.22■■□□□ 1.31
COPS6-210ENST00000496358 VPS33BQ9H267 617 aa23.22■■□□□ 1.31
COPS6-210ENST00000496358 DDNO94850 711 aaPredicted RBP23.21■■□□□ 1.31
COPS6-210ENST00000496358 RARSP54136 660 aaKnown RBP23.21■■□□□ 1.31
COPS6-210ENST00000496358 AOC3Q16853 763 aa23.21■■□□□ 1.31
COPS6-210ENST00000496358 C16orf71Q8IYS4 520 aaPredicted RBP23.21■■□□□ 1.31
COPS6-210ENST00000496358 ZBED9Q6R2W3 1325 aa23.21■■□□□ 1.31
COPS6-210ENST00000496358 RTL9Q8NET4 1388 aa23.21■■□□□ 1.31
COPS6-210ENST00000496358 FZD9O00144 591 aa23.2■■□□□ 1.3
COPS6-210ENST00000496358 GPSM2P81274 684 aa23.2■■□□□ 1.3
COPS6-210ENST00000496358 NIM1KQ8IY84 436 aa23.2■■□□□ 1.3
COPS6-210ENST00000496358 NOB1Q9ULX3 412 aaKnown RBP23.2■■□□□ 1.3
COPS6-210ENST00000496358 WDR90Q96KV7 1748 aa23.19■■□□□ 1.3
COPS6-210ENST00000496358 ZNF541Q9H0D2 1346 aa23.19■■□□□ 1.3
COPS6-210ENST00000496358 CSF1RP07333 972 aa23.19■■□□□ 1.3
COPS6-210ENST00000496358 VEGFAP15692 232 aaPredicted RBP23.19■■□□□ 1.3
COPS6-210ENST00000496358 BRPF1P55201 1214 aaPredicted RBP23.19■■□□□ 1.3
COPS6-210ENST00000496358 EIF6P56537 245 aaKnown RBP23.19■■□□□ 1.3
COPS6-210ENST00000496358 COL4A5P29400 1685 aa23.19■■□□□ 1.3
COPS6-210ENST00000496358 C6orf229H3BNL8 230 aa23.18■■□□□ 1.3
COPS6-210ENST00000496358 ITGA6P23229 1130 aa23.18■■□□□ 1.3
COPS6-210ENST00000496358 ANKIB1Q9P2G1 1089 aa23.18■■□□□ 1.3
COPS6-210ENST00000496358 CHMP3Q9Y3E7 222 aa23.18■■□□□ 1.3
COPS6-210ENST00000496358 DUOX1Q9NRD9 1551 aa23.18■■□□□ 1.3
COPS6-210ENST00000496358 TOMM70O94826 608 aa23.17■■□□□ 1.3
COPS6-210ENST00000496358 IGHMBP2P38935 993 aaKnown RBP23.17■■□□□ 1.3
COPS6-210ENST00000496358 FOXO4P98177 505 aa23.17■■□□□ 1.3
COPS6-210ENST00000496358 KIAA2012Q0VF49 1180 aa23.17■■□□□ 1.3
COPS6-210ENST00000496358 FAM161AQ3B820 660 aa23.17■■□□□ 1.3
COPS6-210ENST00000496358 WASHC4Q2M389 1173 aa23.16■■□□□ 1.3
COPS6-210ENST00000496358 API5Q9BZZ5 524 aaKnown RBP23.16■■□□□ 1.3
COPS6-210ENST00000496358 BSDC1Q9NW68 430 aaPredicted RBP23.16■■□□□ 1.3
COPS6-210ENST00000496358 POLLQ9UGP5 575 aa23.16■■□□□ 1.3
COPS6-210ENST00000496358 LTBP1Q14766 1721 aa23.16■■□□□ 1.3
COPS6-210ENST00000496358 KIF16BQ96L93 1317 aa23.15■■□□□ 1.3
COPS6-210ENST00000496358 ANKRD18BA2A2Z9 1011 aa23.15■■□□□ 1.3
COPS6-210ENST00000496358 NBPF7P0C2Y1 421 aaPredicted RBP23.15■■□□□ 1.3
COPS6-210ENST00000496358 LMBR1LQ6UX01 489 aa23.15■■□□□ 1.3
COPS6-210ENST00000496358 TBC1D16Q8TBP0 767 aa23.15■■□□□ 1.3
COPS6-210ENST00000496358 EYA3Q99504 573 aa23.15■■□□□ 1.3
COPS6-210ENST00000496358 PODXL2Q9NZ53 605 aa23.15■■□□□ 1.3
COPS6-210ENST00000496358 POTECB2RU33 542 aa23.14■■□□□ 1.29
COPS6-210ENST00000496358 RIMBP2O15034 1052 aa23.14■■□□□ 1.29
COPS6-210ENST00000496358 IFIT5Q13325 482 aaKnown RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 298 ms