RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 TMEM88BA6NKF7 163 aa23.84■■□□□ 1.41
CLCNKA-207ENST00000495784 SCNN1DP51172 638 aa23.84■■□□□ 1.41
CLCNKA-207ENST00000495784 TMC4Q7Z404 712 aa23.84■■□□□ 1.41
CLCNKA-207ENST00000495784 RIC3Q7Z5B4 369 aa23.84■■□□□ 1.41
CLCNKA-207ENST00000495784 ZNRF3Q9ULT6 936 aa23.84■■□□□ 1.41
CLCNKA-207ENST00000495784 ADAMTSL1Q8N6G6 1762 aa23.83■■□□□ 1.41
CLCNKA-207ENST00000495784 PCNTO95613 3336 aa23.83■■□□□ 1.41
CLCNKA-207ENST00000495784 CNTNAP1P78357 1384 aa23.82■■□□□ 1.4
CLCNKA-207ENST00000495784 EPS15P42566 896 aa23.82■■□□□ 1.4
CLCNKA-207ENST00000495784 TRIM28Q13263 835 aaKnown RBP23.82■■□□□ 1.4
CLCNKA-207ENST00000495784 RTL5Q5HYW3 569 aaPredicted RBP23.82■■□□□ 1.4
CLCNKA-207ENST00000495784 COL13A1Q5TAT6 717 aaPredicted RBP23.82■■□□□ 1.4
CLCNKA-207ENST00000495784 KIAA2012Q0VF49 1180 aa23.81■■□□□ 1.4
CLCNKA-207ENST00000495784 SF3B3Q15393 1217 aaKnown RBP23.81■■□□□ 1.4
CLCNKA-207ENST00000495784 IRS4O14654 1257 aaPredicted RBP23.8■■□□□ 1.4
CLCNKA-207ENST00000495784 CXCL9Q07325 125 aa23.8■■□□□ 1.4
CLCNKA-207ENST00000495784 C8orf58Q8NAV2 365 aa23.8■■□□□ 1.4
CLCNKA-207ENST00000495784 CHMP4AQ9BY43 222 aa23.8■■□□□ 1.4
CLCNKA-207ENST00000495784 PHAXQ9H814 394 aaKnown RBP23.8■■□□□ 1.4
CLCNKA-207ENST00000495784 LTBP1Q14766 1721 aa23.79■■□□□ 1.4
CLCNKA-207ENST00000495784 USP50Q70EL3 339 aaPredicted RBP23.79■■□□□ 1.4
CLCNKA-207ENST00000495784 DDX60Q8IY21 1712 aaKnown RBP23.79■■□□□ 1.4
CLCNKA-207ENST00000495784 CCDC30Q5VVM6 783 aa23.78■■□□□ 1.4
CLCNKA-207ENST00000495784 CELF1Q92879 486 aaKnown RBP23.78■■□□□ 1.4
CLCNKA-207ENST00000495784 GPRC5DQ9NZD1 345 aa23.78■■□□□ 1.4
CLCNKA-207ENST00000495784 HSP90B1P14625 803 aaKnown RBP23.77■■□□□ 1.4
CLCNKA-207ENST00000495784 CIAPIN1Q6FI81 312 aa23.77■■□□□ 1.4
CLCNKA-207ENST00000495784 ZBTB38Q8NAP3 1195 aaPredicted RBP23.77■■□□□ 1.4
CLCNKA-207ENST00000495784 MYD88Q99836 296 aa23.77■■□□□ 1.4
CLCNKA-207ENST00000495784 ADARB2Q9NS39 739 aaKnown RBP23.77■■□□□ 1.4
CLCNKA-207ENST00000495784 NSFL1CQ9UNZ2 370 aaKnown RBP23.77■■□□□ 1.4
CLCNKA-207ENST00000495784 RAD17O75943 681 aa23.76■■□□□ 1.39
CLCNKA-207ENST00000495784 DDX58O95786 925 aaKnown RBP23.76■■□□□ 1.39
CLCNKA-207ENST00000495784 GMPSP49915 693 aaPredicted RBP23.76■■□□□ 1.39
CLCNKA-207ENST00000495784 TNIP1Q15025 636 aa23.76■■□□□ 1.39
CLCNKA-207ENST00000495784 CCDC184Q52MB2 194 aa23.76■■□□□ 1.39
CLCNKA-207ENST00000495784 BCL2L13Q9BXK5 485 aa23.76■■□□□ 1.39
CLCNKA-207ENST00000495784 TAF1P21675 1872 aa23.75■■□□□ 1.39
CLCNKA-207ENST00000495784 VEGFBP49765 207 aa23.75■■□□□ 1.39
CLCNKA-207ENST00000495784 ABT1Q9ULW3 272 aaKnown RBP23.75■■□□□ 1.39
CLCNKA-207ENST00000495784 WASHC4Q2M389 1173 aa23.74■■□□□ 1.39
CLCNKA-207ENST00000495784 TNS4Q8IZW8 715 aa23.74■■□□□ 1.39
CLCNKA-207ENST00000495784 CCDC191Q8NCU4 936 aa23.74■■□□□ 1.39
CLCNKA-207ENST00000495784 DUOX1Q9NRD9 1551 aa23.74■■□□□ 1.39
CLCNKA-207ENST00000495784 LRRC37AA6NMS7 1700 aa23.73■■□□□ 1.39
CLCNKA-207ENST00000495784 C6orf229H3BNL8 230 aa23.73■■□□□ 1.39
CLCNKA-207ENST00000495784 RPS8P62241 208 aaKnown RBP23.73■■□□□ 1.39
CLCNKA-207ENST00000495784 TSPYL6Q8N831 410 aa23.73■■□□□ 1.39
CLCNKA-207ENST00000495784 TSR2Q969E8 191 aaKnown RBP23.73■■□□□ 1.39
CLCNKA-207ENST00000495784 CWC25Q9NXE8 425 aaPredicted RBP23.73■■□□□ 1.39
CLCNKA-207ENST00000495784 CDHR2Q9BYE9 1310 aa23.73■■□□□ 1.39
CLCNKA-207ENST00000495784 ZEB1P37275 1124 aaPredicted RBP23.72■■□□□ 1.39
CLCNKA-207ENST00000495784 DEFB115Q30KQ5 88 aa23.72■■□□□ 1.39
CLCNKA-207ENST00000495784 METTL22Q9BUU2 404 aaPredicted RBP23.72■■□□□ 1.39
CLCNKA-207ENST00000495784 RASSF10A6NK89 507 aa23.71■■□□□ 1.39
CLCNKA-207ENST00000495784 YDJCA8MPS7 323 aa23.71■■□□□ 1.39
CLCNKA-207ENST00000495784 PCCAP05165 728 aaPredicted RBP23.71■■□□□ 1.39
CLCNKA-207ENST00000495784 GPSM2P81274 684 aa23.71■■□□□ 1.39
CLCNKA-207ENST00000495784 CCDC27Q2M243 656 aa23.71■■□□□ 1.39
CLCNKA-207ENST00000495784 STK31Q9BXU1 1019 aa23.71■■□□□ 1.39
CLCNKA-207ENST00000495784 RIMBP2O15034 1052 aa23.7■■□□□ 1.38
CLCNKA-207ENST00000495784 CCDC152Q4G0S7 254 aa23.7■■□□□ 1.38
CLCNKA-207ENST00000495784 WWC1Q8IX03 1113 aa23.7■■□□□ 1.38
CLCNKA-207ENST00000495784 AIDAQ96BJ3 306 aa23.7■■□□□ 1.38
CLCNKA-207ENST00000495784 EYA3Q99504 573 aa23.7■■□□□ 1.38
CLCNKA-207ENST00000495784 MAP3K2Q9Y2U5 619 aa23.7■■□□□ 1.38
CLCNKA-207ENST00000495784 TRAF5O00463 557 aa23.69■■□□□ 1.38
CLCNKA-207ENST00000495784 PDE8AO60658 829 aa23.69■■□□□ 1.38
CLCNKA-207ENST00000495784 FMR1Q06787 632 aaKnown RBP eCLIP23.69■■□□□ 1.38
CLCNKA-207ENST00000495784 JARID2Q92833 1246 aaPredicted RBP23.69■■□□□ 1.38
CLCNKA-207ENST00000495784 DBNDD1Q9H9R9 158 aa23.69■■□□□ 1.38
CLCNKA-207ENST00000495784 MRS2Q9HD23 443 aa23.69■■□□□ 1.38
CLCNKA-207ENST00000495784 SEC31BQ9NQW1 1179 aa23.69■■□□□ 1.38
CLCNKA-207ENST00000495784 POLLQ9UGP5 575 aa23.69■■□□□ 1.38
CLCNKA-207ENST00000495784 CNOT7Q9UIV1 285 aaKnown RBP23.68■■□□□ 1.38
CLCNKA-207ENST00000495784 COL4A1P02462 1669 aa23.67■■□□□ 1.38
CLCNKA-207ENST00000495784 H7C1D1 291 aa23.67■■□□□ 1.38
CLCNKA-207ENST00000495784 KSR2Q6VAB6 950 aa23.67■■□□□ 1.38
CLCNKA-207ENST00000495784 TBC1D16Q8TBP0 767 aa23.67■■□□□ 1.38
CLCNKA-207ENST00000495784 PI4KAP2A4QPH2 592 aa23.66■■□□□ 1.38
CLCNKA-207ENST00000495784 FOXN1O15353 648 aa23.66■■□□□ 1.38
CLCNKA-207ENST00000495784 ANP32CO43423 234 aa23.66■■□□□ 1.38
CLCNKA-207ENST00000495784 NEXNQ0ZGT2 675 aa23.66■■□□□ 1.38
CLCNKA-207ENST00000495784 TWISTNBQ3B726 338 aaPredicted RBP23.66■■□□□ 1.38
CLCNKA-207ENST00000495784 PAXIP1Q6ZW49 1069 aaPredicted RBP23.66■■□□□ 1.38
CLCNKA-207ENST00000495784 MICALL2Q8IY33 904 aa23.66■■□□□ 1.38
CLCNKA-207ENST00000495784 PI4KAP1Q8N8J0 262 aa23.66■■□□□ 1.38
CLCNKA-207ENST00000495784 CCDC85AQ96PX6 553 aaPredicted RBP23.66■■□□□ 1.38
CLCNKA-207ENST00000495784 ANKIB1Q9P2G1 1089 aa23.66■■□□□ 1.38
CLCNKA-207ENST00000495784 IL16Q14005 1332 aa23.65■■□□□ 1.38
CLCNKA-207ENST00000495784 WDR33Q9C0J8 1336 aaKnown RBP23.65■■□□□ 1.38
CLCNKA-207ENST00000495784 PSMD14O00487 310 aa23.65■■□□□ 1.38
CLCNKA-207ENST00000495784 ECE2O60344 883 aa23.65■■□□□ 1.38
CLCNKA-207ENST00000495784 DOK7Q18PE1 504 aa23.65■■□□□ 1.38
CLCNKA-207ENST00000495784 ZC3H15Q8WU90 426 aaKnown RBP23.65■■□□□ 1.38
CLCNKA-207ENST00000495784 GPR101Q96P66 508 aaPredicted RBP23.65■■□□□ 1.38
CLCNKA-207ENST00000495784 ZC3H12CQ9C0D7 883 aaKnown RBP23.65■■□□□ 1.38
CLCNKA-207ENST00000495784 ZBTB12Q9Y330 459 aaPredicted RBP23.65■■□□□ 1.38
CLCNKA-207ENST00000495784 G3V3G9 751 aa23.64■■□□□ 1.37
CLCNKA-207ENST00000495784 UFL1O94874 794 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms