RNA–Protein interactions for RNA: ENST00000492271.1

TCEA3-206, Transcript of transcription elongation factor A3, humanhuman

TSL 3

Gene TCEA3, Length 441 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-206ENST00000492271 TRIM28Q13263 835 aaKnown RBP22.39■■□□□ 1.17
TCEA3-206ENST00000492271 DDX46Q7L014 1031 aaKnown RBP22.39■■□□□ 1.17
TCEA3-206ENST00000492271 CLEC11AQ9Y240 323 aa22.39■■□□□ 1.17
TCEA3-206ENST00000492271 TMEM88BA6NKF7 163 aa22.38■■□□□ 1.17
TCEA3-206ENST00000492271 GNAI1P63096 354 aa22.38■■□□□ 1.17
TCEA3-206ENST00000492271 DPP8Q6V1X1 898 aaPredicted RBP22.38■■□□□ 1.17
TCEA3-206ENST00000492271 CNTROBQ8N137 903 aa22.38■■□□□ 1.17
TCEA3-206ENST00000492271 SUPT20HQ8NEM7 779 aa22.38■■□□□ 1.17
TCEA3-206ENST00000492271 FAM89AQ96GI7 184 aa22.38■■□□□ 1.17
TCEA3-206ENST00000492271 KIAA2012Q0VF49 1180 aa22.37■■□□□ 1.17
TCEA3-206ENST00000492271 SF3B3Q15393 1217 aaKnown RBP22.37■■□□□ 1.17
TCEA3-206ENST00000492271 CCDC184Q52MB2 194 aa22.37■■□□□ 1.17
TCEA3-206ENST00000492271 MPNDQ8N594 471 aa22.37■■□□□ 1.17
TCEA3-206ENST00000492271 TMX4Q9H1E5 349 aaPredicted RBP22.37■■□□□ 1.17
TCEA3-206ENST00000492271 ZNRF3Q9ULT6 936 aa22.37■■□□□ 1.17
TCEA3-206ENST00000492271 THSD7BQ9C0I4 1608 aa22.36■■□□□ 1.17
TCEA3-206ENST00000492271 LMOD1P29536 600 aaPredicted RBP22.36■■□□□ 1.17
TCEA3-206ENST00000492271 CALD1Q05682 793 aaKnown RBP22.36■■□□□ 1.17
TCEA3-206ENST00000492271 CXCL9Q07325 125 aa22.36■■□□□ 1.17
TCEA3-206ENST00000492271 PHAXQ9H814 394 aaKnown RBP22.36■■□□□ 1.17
TCEA3-206ENST00000492271 TMC4Q7Z404 712 aa22.35■■□□□ 1.17
TCEA3-206ENST00000492271 C8orf58Q8NAV2 365 aa22.35■■□□□ 1.17
TCEA3-206ENST00000492271 CELF1Q92879 486 aaKnown RBP22.35■■□□□ 1.17
TCEA3-206ENST00000492271 USP50Q70EL3 339 aaPredicted RBP22.34■■□□□ 1.17
TCEA3-206ENST00000492271 GPRC5DQ9NZD1 345 aa22.34■■□□□ 1.17
TCEA3-206ENST00000492271 ELL2O00472 640 aaPredicted RBP22.33■■□□□ 1.17
TCEA3-206ENST00000492271 MYH3P11055 1940 aa22.32■■□□□ 1.16
TCEA3-206ENST00000492271 RASSF10A6NK89 507 aa22.32■■□□□ 1.16
TCEA3-206ENST00000492271 YDJCA8MPS7 323 aa22.32■■□□□ 1.16
TCEA3-206ENST00000492271 VEGFBP49765 207 aa22.32■■□□□ 1.16
TCEA3-206ENST00000492271 GOLGA2Q08379 1002 aa22.32■■□□□ 1.16
TCEA3-206ENST00000492271 RTL5Q5HYW3 569 aaPredicted RBP22.32■■□□□ 1.16
TCEA3-206ENST00000492271 SCN9AQ15858 1988 aa22.32■■□□□ 1.16
TCEA3-206ENST00000492271 CDHR2Q9BYE9 1310 aa22.31■■□□□ 1.16
TCEA3-206ENST00000492271 IRS4O14654 1257 aaPredicted RBP22.31■■□□□ 1.16
TCEA3-206ENST00000492271 GMPSP49915 693 aaPredicted RBP22.31■■□□□ 1.16
TCEA3-206ENST00000492271 FMR1Q06787 632 aaKnown RBP eCLIP22.31■■□□□ 1.16
TCEA3-206ENST00000492271 ZBTB38Q8NAP3 1195 aaPredicted RBP22.31■■□□□ 1.16
TCEA3-206ENST00000492271 ADARB2Q9NS39 739 aaKnown RBP22.31■■□□□ 1.16
TCEA3-206ENST00000492271 CIAPIN1Q6FI81 312 aa22.3■■□□□ 1.16
TCEA3-206ENST00000492271 RIC3Q7Z5B4 369 aa22.3■■□□□ 1.16
TCEA3-206ENST00000492271 TSPYL6Q8N831 410 aa22.3■■□□□ 1.16
TCEA3-206ENST00000492271 PSME4Q14997 1843 aa22.29■■□□□ 1.16
TCEA3-206ENST00000492271 RAD17O75943 681 aa22.29■■□□□ 1.16
TCEA3-206ENST00000492271 CCDC27Q2M243 656 aa22.28■■□□□ 1.16
TCEA3-206ENST00000492271 MYD88Q99836 296 aa22.28■■□□□ 1.16
TCEA3-206ENST00000492271 SPEF2Q9C093 1822 aa22.27■■□□□ 1.16
TCEA3-206ENST00000492271 TRAF5O00463 557 aa22.27■■□□□ 1.16
TCEA3-206ENST00000492271 GPSM2P81274 684 aa22.27■■□□□ 1.16
TCEA3-206ENST00000492271 TNS4Q8IZW8 715 aa22.27■■□□□ 1.16
TCEA3-206ENST00000492271 CCDC191Q8NCU4 936 aa22.27■■□□□ 1.16
TCEA3-206ENST00000492271 TSR2Q969E8 191 aaKnown RBP22.27■■□□□ 1.16
TCEA3-206ENST00000492271 METTL22Q9BUU2 404 aaPredicted RBP22.27■■□□□ 1.16
TCEA3-206ENST00000492271 POLLQ9UGP5 575 aa22.27■■□□□ 1.16
TCEA3-206ENST00000492271 CACNA1FO60840 1977 aa22.27■■□□□ 1.15
TCEA3-206ENST00000492271 FOXN1O15353 648 aa22.26■■□□□ 1.15
TCEA3-206ENST00000492271 PCCAP05165 728 aaPredicted RBP22.26■■□□□ 1.15
TCEA3-206ENST00000492271 CCDC30Q5VVM6 783 aa22.26■■□□□ 1.15
TCEA3-206ENST00000492271 PGAP2Q9UHJ9 254 aa22.26■■□□□ 1.15
TCEA3-206ENST00000492271 NSFL1CQ9UNZ2 370 aaKnown RBP22.26■■□□□ 1.15
TCEA3-206ENST00000492271 SHTN1A0MZ66 631 aa22.25■■□□□ 1.15
TCEA3-206ENST00000492271 HIRAP54198 1017 aaPredicted RBP22.25■■□□□ 1.15
TCEA3-206ENST00000492271 RPS8P62241 208 aaKnown RBP22.25■■□□□ 1.15
TCEA3-206ENST00000492271 TNIP1Q15025 636 aa22.25■■□□□ 1.15
TCEA3-206ENST00000492271 WASHC4Q2M389 1173 aa22.25■■□□□ 1.15
TCEA3-206ENST00000492271 DEFB115Q30KQ5 88 aa22.25■■□□□ 1.15
TCEA3-206ENST00000492271 CST9Q5W186 159 aa22.25■■□□□ 1.15
TCEA3-206ENST00000492271 WWC1Q8IX03 1113 aa22.25■■□□□ 1.15
TCEA3-206ENST00000492271 TRPM4Q8TD43 1214 aa22.25■■□□□ 1.15
TCEA3-206ENST00000492271 SEC31BQ9NQW1 1179 aa22.25■■□□□ 1.15
TCEA3-206ENST00000492271 DBNDD1Q9H9R9 158 aa22.24■■□□□ 1.15
TCEA3-206ENST00000492271 WBP1LQ9NX94 342 aa22.24■■□□□ 1.15
TCEA3-206ENST00000492271 CWC25Q9NXE8 425 aaPredicted RBP22.24■■□□□ 1.15
TCEA3-206ENST00000492271 POLR2AP24928 1970 aaKnown RBP22.24■■□□□ 1.15
TCEA3-206ENST00000492271 RTL9Q8NET4 1388 aa22.24■■□□□ 1.15
TCEA3-206ENST00000492271 TBC1D16Q8TBP0 767 aa22.23■■□□□ 1.15
TCEA3-206ENST00000492271 PODXL2Q9NZ53 605 aa22.23■■□□□ 1.15
TCEA3-206ENST00000492271 ABT1Q9ULW3 272 aaKnown RBP22.23■■□□□ 1.15
TCEA3-206ENST00000492271 MAP3K2Q9Y2U5 619 aa22.23■■□□□ 1.15
TCEA3-206ENST00000492271 ZNF646O15015 1829 aaPredicted RBP22.22■■□□□ 1.15
TCEA3-206ENST00000492271 PSMD14O00487 310 aa22.22■■□□□ 1.15
TCEA3-206ENST00000492271 IGKV5-2P06315 115 aa22.22■■□□□ 1.15
TCEA3-206ENST00000492271 JARID2Q92833 1246 aaPredicted RBP22.22■■□□□ 1.15
TCEA3-206ENST00000492271 GPR101Q96P66 508 aaPredicted RBP22.22■■□□□ 1.15
TCEA3-206ENST00000492271 BCL2L13Q9BXK5 485 aa22.22■■□□□ 1.15
TCEA3-206ENST00000492271 WDR33Q9C0J8 1336 aaKnown RBP22.22■■□□□ 1.15
TCEA3-206ENST00000492271 PDE8AO60658 829 aa22.21■■□□□ 1.15
TCEA3-206ENST00000492271 DDX58O95786 925 aaKnown RBP22.21■■□□□ 1.15
TCEA3-206ENST00000492271 HSP90B1P14625 803 aaKnown RBP22.21■■□□□ 1.15
TCEA3-206ENST00000492271 NCBP3Q53F19 620 aaKnown RBP22.21■■□□□ 1.15
TCEA3-206ENST00000492271 ZC3H15Q8WU90 426 aaKnown RBP22.21■■□□□ 1.15
TCEA3-206ENST00000492271 CHMP4AQ9BY43 222 aa22.21■■□□□ 1.15
TCEA3-206ENST00000492271 GLIS2Q9BZE0 524 aaPredicted RBP22.21■■□□□ 1.15
TCEA3-206ENST00000492271 CNOT7Q9UIV1 285 aaKnown RBP22.21■■□□□ 1.15
TCEA3-206ENST00000492271 ZBTB12Q9Y330 459 aaPredicted RBP22.21■■□□□ 1.15
TCEA3-206ENST00000492271 IL16Q14005 1332 aa22.21■■□□□ 1.15
TCEA3-206ENST00000492271 PI4KAP2A4QPH2 592 aa22.2■■□□□ 1.14
TCEA3-206ENST00000492271 C6orf229H3BNL8 230 aa22.2■■□□□ 1.14
TCEA3-206ENST00000492271 RIMBP2O15034 1052 aa22.2■■□□□ 1.14
TCEA3-206ENST00000492271 ECE2O60344 883 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms