RNA–Protein interactions for RNA: ENST00000491439.1

SNAP47-211, Transcript of synaptosome associated protein 47, humanhuman

TSL 3

Gene SNAP47, Length 734 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-211ENST00000491439 MAP1SQ66K74 1059 aaPredicted RBP13.08□□□□□ -0.32
SNAP47-211ENST00000491439 DPP8Q6V1X1 898 aaPredicted RBP13.08□□□□□ -0.32
SNAP47-211ENST00000491439 CNTROBQ8N137 903 aa13.08□□□□□ -0.32
SNAP47-211ENST00000491439 FAM89AQ96GI7 184 aa13.08□□□□□ -0.32
SNAP47-211ENST00000491439 TMX4Q9H1E5 349 aaPredicted RBP13.08□□□□□ -0.32
SNAP47-211ENST00000491439 ZNRF3Q9ULT6 936 aa13.08□□□□□ -0.32
SNAP47-211ENST00000491439 CLEC11AQ9Y240 323 aa13.08□□□□□ -0.32
SNAP47-211ENST00000491439 LAMB2P55268 1798 aa13.07□□□□□ -0.32
SNAP47-211ENST00000491439 LMOD1P29536 600 aaPredicted RBP13.07□□□□□ -0.32
SNAP47-211ENST00000491439 TMC4Q7Z404 712 aa13.07□□□□□ -0.32
SNAP47-211ENST00000491439 MPNDQ8N594 471 aa13.07□□□□□ -0.32
SNAP47-211ENST00000491439 ZNF428Q96B54 188 aa13.07□□□□□ -0.32
SNAP47-211ENST00000491439 COL4A1P02462 1669 aa13.06□□□□□ -0.32
SNAP47-211ENST00000491439 LRRC37AA6NMS7 1700 aa13.06□□□□□ -0.32
SNAP47-211ENST00000491439 CXCL9Q07325 125 aa13.06□□□□□ -0.32
SNAP47-211ENST00000491439 USP50Q70EL3 339 aaPredicted RBP13.06□□□□□ -0.32
SNAP47-211ENST00000491439 C8orf58Q8NAV2 365 aa13.06□□□□□ -0.32
SNAP47-211ENST00000491439 PHAXQ9H814 394 aaKnown RBP13.06□□□□□ -0.32
SNAP47-211ENST00000491439 GPRC5DQ9NZD1 345 aa13.06□□□□□ -0.32
SNAP47-211ENST00000491439 DDX60Q8IY21 1712 aaKnown RBP13.05□□□□□ -0.32
SNAP47-211ENST00000491439 RASSF10A6NK89 507 aa13.05□□□□□ -0.32
SNAP47-211ENST00000491439 GOLGA2Q08379 1002 aa13.05□□□□□ -0.32
SNAP47-211ENST00000491439 CCDC184Q52MB2 194 aa13.05□□□□□ -0.32
SNAP47-211ENST00000491439 CELF1Q92879 486 aaKnown RBP13.05□□□□□ -0.32
SNAP47-211ENST00000491439 CDHR2Q9BYE9 1310 aa13.05□□□□□ -0.32
SNAP47-211ENST00000491439 ELL2O00472 640 aaPredicted RBP13.04□□□□□ -0.32
SNAP47-211ENST00000491439 IRS4O14654 1257 aaPredicted RBP13.04□□□□□ -0.32
SNAP47-211ENST00000491439 VEGFBP49765 207 aa13.04□□□□□ -0.32
SNAP47-211ENST00000491439 GMPSP49915 693 aaPredicted RBP13.04□□□□□ -0.32
SNAP47-211ENST00000491439 ADARB2Q9NS39 739 aaKnown RBP13.04□□□□□ -0.32
SNAP47-211ENST00000491439 YDJCA8MPS7 323 aa13.03□□□□□ -0.32
SNAP47-211ENST00000491439 FMR1Q06787 632 aaKnown RBP eCLIP13.03□□□□□ -0.32
SNAP47-211ENST00000491439 RTL5Q5HYW3 569 aaPredicted RBP13.03□□□□□ -0.32
SNAP47-211ENST00000491439 CIAPIN1Q6FI81 312 aa13.03□□□□□ -0.32
SNAP47-211ENST00000491439 RIC3Q7Z5B4 369 aa13.03□□□□□ -0.32
SNAP47-211ENST00000491439 ZBTB38Q8NAP3 1195 aaPredicted RBP13.03□□□□□ -0.32
SNAP47-211ENST00000491439 RAD17O75943 681 aa13.02□□□□□ -0.33
SNAP47-211ENST00000491439 CCDC27Q2M243 656 aa13.02□□□□□ -0.33
SNAP47-211ENST00000491439 TSPYL6Q8N831 410 aa13.02□□□□□ -0.33
SNAP47-211ENST00000491439 MYD88Q99836 296 aa13.02□□□□□ -0.33
SNAP47-211ENST00000491439 PGAP2Q9UHJ9 254 aa13.02□□□□□ -0.33
SNAP47-211ENST00000491439 TRAF5O00463 557 aa13.01□□□□□ -0.33
SNAP47-211ENST00000491439 FOXN1O15353 648 aa13.01□□□□□ -0.33
SNAP47-211ENST00000491439 PCCAP05165 728 aaPredicted RBP13.01□□□□□ -0.33
SNAP47-211ENST00000491439 GPSM2P81274 684 aa13.01□□□□□ -0.33
SNAP47-211ENST00000491439 TNIP1Q15025 636 aa13.01□□□□□ -0.33
SNAP47-211ENST00000491439 CCDC30Q5VVM6 783 aa13.01□□□□□ -0.33
SNAP47-211ENST00000491439 TNS4Q8IZW8 715 aa13.01□□□□□ -0.33
SNAP47-211ENST00000491439 CCDC191Q8NCU4 936 aa13.01□□□□□ -0.33
SNAP47-211ENST00000491439 METTL22Q9BUU2 404 aaPredicted RBP13.01□□□□□ -0.33
SNAP47-211ENST00000491439 POLLQ9UGP5 575 aa13.01□□□□□ -0.33
SNAP47-211ENST00000491439 NSFL1CQ9UNZ2 370 aaKnown RBP13.01□□□□□ -0.33
SNAP47-211ENST00000491439 HIRAP54198 1017 aaPredicted RBP13□□□□□ -0.33
SNAP47-211ENST00000491439 RPS8P62241 208 aaKnown RBP13□□□□□ -0.33
SNAP47-211ENST00000491439 WASHC4Q2M389 1173 aa13□□□□□ -0.33
SNAP47-211ENST00000491439 DEFB115Q30KQ5 88 aa13□□□□□ -0.33
SNAP47-211ENST00000491439 CST9Q5W186 159 aa13□□□□□ -0.33
SNAP47-211ENST00000491439 TSR2Q969E8 191 aaKnown RBP13□□□□□ -0.33
SNAP47-211ENST00000491439 CHMP4AQ9BY43 222 aa13□□□□□ -0.33
SNAP47-211ENST00000491439 WBP1LQ9NX94 342 aa13□□□□□ -0.33
SNAP47-211ENST00000491439 PODXL2Q9NZ53 605 aa13□□□□□ -0.33
SNAP47-211ENST00000491439 DDX58O95786 925 aaKnown RBP12.99□□□□□ -0.33
SNAP47-211ENST00000491439 HSP90B1P14625 803 aaKnown RBP12.99□□□□□ -0.33
SNAP47-211ENST00000491439 NCBP3Q53F19 620 aaKnown RBP12.99□□□□□ -0.33
SNAP47-211ENST00000491439 WWC1Q8IX03 1113 aa12.99□□□□□ -0.33
SNAP47-211ENST00000491439 TBC1D16Q8TBP0 767 aa12.99□□□□□ -0.33
SNAP47-211ENST00000491439 TRPM4Q8TD43 1214 aa12.99□□□□□ -0.33
SNAP47-211ENST00000491439 ZC3H15Q8WU90 426 aaKnown RBP12.99□□□□□ -0.33
SNAP47-211ENST00000491439 SEC31BQ9NQW1 1179 aa12.99□□□□□ -0.33
SNAP47-211ENST00000491439 CWC25Q9NXE8 425 aaPredicted RBP12.99□□□□□ -0.33
SNAP47-211ENST00000491439 ABT1Q9ULW3 272 aaKnown RBP12.99□□□□□ -0.33
SNAP47-211ENST00000491439 THSD7BQ9C0I4 1608 aa12.99□□□□□ -0.33
SNAP47-211ENST00000491439 RTL9Q8NET4 1388 aa12.98□□□□□ -0.33
SNAP47-211ENST00000491439 IL16Q14005 1332 aa12.98□□□□□ -0.33
SNAP47-211ENST00000491439 WDR33Q9C0J8 1336 aaKnown RBP12.98□□□□□ -0.33
SNAP47-211ENST00000491439 SHTN1A0MZ66 631 aa12.98□□□□□ -0.33
SNAP47-211ENST00000491439 C6orf229H3BNL8 230 aa12.98□□□□□ -0.33
SNAP47-211ENST00000491439 PDE8AO60658 829 aa12.98□□□□□ -0.33
SNAP47-211ENST00000491439 IGKV5-2P06315 115 aa12.98□□□□□ -0.33
SNAP47-211ENST00000491439 KSR2Q6VAB6 950 aa12.98□□□□□ -0.33
SNAP47-211ENST00000491439 DPF2Q92785 391 aa12.98□□□□□ -0.33
SNAP47-211ENST00000491439 BCL2L13Q9BXK5 485 aa12.98□□□□□ -0.33
SNAP47-211ENST00000491439 DBNDD1Q9H9R9 158 aa12.98□□□□□ -0.33
SNAP47-211ENST00000491439 CNOT7Q9UIV1 285 aaKnown RBP12.98□□□□□ -0.33
SNAP47-211ENST00000491439 MAP3K2Q9Y2U5 619 aa12.98□□□□□ -0.33
SNAP47-211ENST00000491439 ZBTB12Q9Y330 459 aaPredicted RBP12.98□□□□□ -0.33
SNAP47-211ENST00000491439 TAF1P21675 1872 aa12.97□□□□□ -0.33
SNAP47-211ENST00000491439 PI4KAP2A4QPH2 592 aa12.97□□□□□ -0.33
SNAP47-211ENST00000491439 PSMD14O00487 310 aa12.97□□□□□ -0.33
SNAP47-211ENST00000491439 RIMBP2O15034 1052 aa12.97□□□□□ -0.33
SNAP47-211ENST00000491439 ECE2O60344 883 aa12.97□□□□□ -0.33
SNAP47-211ENST00000491439 CCDC152Q4G0S7 254 aa12.97□□□□□ -0.33
SNAP47-211ENST00000491439 MICALL2Q8IY33 904 aa12.97□□□□□ -0.33
SNAP47-211ENST00000491439 PI4KAP1Q8N8J0 262 aa12.97□□□□□ -0.33
SNAP47-211ENST00000491439 JARID2Q92833 1246 aaPredicted RBP12.97□□□□□ -0.33
SNAP47-211ENST00000491439 GPR101Q96P66 508 aaPredicted RBP12.97□□□□□ -0.33
SNAP47-211ENST00000491439 EYA3Q99504 573 aa12.97□□□□□ -0.33
SNAP47-211ENST00000491439 GLIS2Q9BZE0 524 aaPredicted RBP12.97□□□□□ -0.33
SNAP47-211ENST00000491439 PRDM10Q9NQV6 1147 aa12.97□□□□□ -0.33
SNAP47-211ENST00000491439 TLL2Q9Y6L7 1015 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms