RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 LTBP1Q14766 1721 aa27.14■■□□□ 1.94
SYNE4-205ENST00000490730 PHAXQ9H814 394 aaKnown RBP27.13■■□□□ 1.93
SYNE4-205ENST00000490730 ITGBL1O95965 494 aaPredicted RBP27.12■■□□□ 1.93
SYNE4-205ENST00000490730 CCDC184Q52MB2 194 aa27.12■■□□□ 1.93
SYNE4-205ENST00000490730 C8orf58Q8NAV2 365 aa27.12■■□□□ 1.93
SYNE4-205ENST00000490730 RTFDC1Q9BY42 306 aaPredicted RBP27.12■■□□□ 1.93
SYNE4-205ENST00000490730 HSPA1AP0DMV8 641 aaKnown RBP27.11■■□□□ 1.93
SYNE4-205ENST00000490730 HSPA1BP0DMV9 641 aaKnown RBP27.11■■□□□ 1.93
SYNE4-205ENST00000490730 EPS15P42566 896 aa27.11■■□□□ 1.93
SYNE4-205ENST00000490730 SCNN1DP51172 638 aa27.11■■□□□ 1.93
SYNE4-205ENST00000490730 CNTROBQ8N137 903 aa27.11■■□□□ 1.93
SYNE4-205ENST00000490730 VPS33BQ9H267 617 aa27.11■■□□□ 1.93
SYNE4-205ENST00000490730 TMEM88BA6NKF7 163 aa27.1■■□□□ 1.93
SYNE4-205ENST00000490730 ZNRF3Q9ULT6 936 aa27.1■■□□□ 1.93
SYNE4-205ENST00000490730 IRS4O14654 1257 aaPredicted RBP27.09■■□□□ 1.93
SYNE4-205ENST00000490730 TMC4Q7Z404 712 aa27.09■■□□□ 1.93
SYNE4-205ENST00000490730 MYD88Q99836 296 aa27.09■■□□□ 1.93
SYNE4-205ENST00000490730 LRRC37AA6NMS7 1700 aa27.09■■□□□ 1.93
SYNE4-205ENST00000490730 CXCL9Q07325 125 aa27.08■■□□□ 1.93
SYNE4-205ENST00000490730 CELF1Q92879 486 aaKnown RBP27.08■■□□□ 1.93
SYNE4-205ENST00000490730 KIAA2012Q0VF49 1180 aa27.07■■□□□ 1.92
SYNE4-205ENST00000490730 TRIM28Q13263 835 aaKnown RBP27.07■■□□□ 1.92
SYNE4-205ENST00000490730 SF3B3Q15393 1217 aaKnown RBP27.07■■□□□ 1.92
SYNE4-205ENST00000490730 COL13A1Q5TAT6 717 aaPredicted RBP27.07■■□□□ 1.92
SYNE4-205ENST00000490730 CCDC30Q5VVM6 783 aa27.07■■□□□ 1.92
SYNE4-205ENST00000490730 TSR2Q969E8 191 aaKnown RBP27.07■■□□□ 1.92
SYNE4-205ENST00000490730 CNTNAP1P78357 1384 aa27.07■■□□□ 1.92
SYNE4-205ENST00000490730 DUOX1Q9NRD9 1551 aa27.05■■□□□ 1.92
SYNE4-205ENST00000490730 RAD17O75943 681 aa27.05■■□□□ 1.92
SYNE4-205ENST00000490730 ZEB1P37275 1124 aaPredicted RBP27.05■■□□□ 1.92
SYNE4-205ENST00000490730 CIAPIN1Q6FI81 312 aa27.05■■□□□ 1.92
SYNE4-205ENST00000490730 NSFL1CQ9UNZ2 370 aaKnown RBP27.05■■□□□ 1.92
SYNE4-205ENST00000490730 COL4A1P02462 1669 aa27.05■■□□□ 1.92
SYNE4-205ENST00000490730 DDX58O95786 925 aaKnown RBP27.04■■□□□ 1.92
SYNE4-205ENST00000490730 GMPSP49915 693 aaPredicted RBP27.04■■□□□ 1.92
SYNE4-205ENST00000490730 USP50Q70EL3 339 aaPredicted RBP27.04■■□□□ 1.92
SYNE4-205ENST00000490730 TSPYL6Q8N831 410 aa27.04■■□□□ 1.92
SYNE4-205ENST00000490730 ZBTB38Q8NAP3 1195 aaPredicted RBP27.04■■□□□ 1.92
SYNE4-205ENST00000490730 CHMP4AQ9BY43 222 aa27.04■■□□□ 1.92
SYNE4-205ENST00000490730 GPRC5DQ9NZD1 345 aa27.04■■□□□ 1.92
SYNE4-205ENST00000490730 BCL2L13Q9BXK5 485 aa27.03■■□□□ 1.92
SYNE4-205ENST00000490730 TNIP1Q15025 636 aa27.02■■□□□ 1.92
SYNE4-205ENST00000490730 JARID2Q92833 1246 aaPredicted RBP27.02■■□□□ 1.92
SYNE4-205ENST00000490730 MRS2Q9HD23 443 aa27.02■■□□□ 1.92
SYNE4-205ENST00000490730 ADARB2Q9NS39 739 aaKnown RBP27.02■■□□□ 1.92
SYNE4-205ENST00000490730 C6orf229H3BNL8 230 aa27.01■■□□□ 1.91
SYNE4-205ENST00000490730 HSP90B1P14625 803 aaKnown RBP27.01■■□□□ 1.91
SYNE4-205ENST00000490730 CCDC191Q8NCU4 936 aa27.01■■□□□ 1.91
SYNE4-205ENST00000490730 CWC25Q9NXE8 425 aaPredicted RBP27.01■■□□□ 1.91
SYNE4-205ENST00000490730 ABT1Q9ULW3 272 aaKnown RBP27.01■■□□□ 1.91
SYNE4-205ENST00000490730 RIMBP2O15034 1052 aa27■■□□□ 1.91
SYNE4-205ENST00000490730 VEGFBP49765 207 aa27■■□□□ 1.91
SYNE4-205ENST00000490730 GPSM2P81274 684 aa27■■□□□ 1.91
SYNE4-205ENST00000490730 WASHC4Q2M389 1173 aa27■■□□□ 1.91
SYNE4-205ENST00000490730 WWC1Q8IX03 1113 aa27■■□□□ 1.91
SYNE4-205ENST00000490730 METTL22Q9BUU2 404 aaPredicted RBP27■■□□□ 1.91
SYNE4-205ENST00000490730 STK31Q9BXU1 1019 aa27■■□□□ 1.91
SYNE4-205ENST00000490730 MAP3K2Q9Y2U5 619 aa27■■□□□ 1.91
SYNE4-205ENST00000490730 YDJCA8MPS7 323 aa26.99■■□□□ 1.91
SYNE4-205ENST00000490730 RPS8P62241 208 aaKnown RBP26.99■■□□□ 1.91
SYNE4-205ENST00000490730 CCDC85AQ96PX6 553 aaPredicted RBP26.99■■□□□ 1.91
SYNE4-205ENST00000490730 ANP32CO43423 234 aa26.98■■□□□ 1.91
SYNE4-205ENST00000490730 PCCAP05165 728 aaPredicted RBP26.98■■□□□ 1.91
SYNE4-205ENST00000490730 FMR1Q06787 632 aaKnown RBP eCLIP26.98■■□□□ 1.91
SYNE4-205ENST00000490730 CCDC27Q2M243 656 aa26.98■■□□□ 1.91
SYNE4-205ENST00000490730 DBNDD1Q9H9R9 158 aa26.98■■□□□ 1.91
SYNE4-205ENST00000490730 SEC31BQ9NQW1 1179 aa26.98■■□□□ 1.91
SYNE4-205ENST00000490730 TRAF5O00463 557 aa26.97■■□□□ 1.91
SYNE4-205ENST00000490730 CCDC152Q4G0S7 254 aa26.97■■□□□ 1.91
SYNE4-205ENST00000490730 TNS4Q8IZW8 715 aa26.97■■□□□ 1.91
SYNE4-205ENST00000490730 POLLQ9UGP5 575 aa26.97■■□□□ 1.91
SYNE4-205ENST00000490730 CDHR2Q9BYE9 1310 aa26.96■■□□□ 1.91
SYNE4-205ENST00000490730 DEFB115Q30KQ5 88 aa26.96■■□□□ 1.91
SYNE4-205ENST00000490730 TWISTNBQ3B726 338 aaPredicted RBP26.96■■□□□ 1.91
SYNE4-205ENST00000490730 GPR101Q96P66 508 aaPredicted RBP26.96■■□□□ 1.91
SYNE4-205ENST00000490730 EYA3Q99504 573 aa26.96■■□□□ 1.91
SYNE4-205ENST00000490730 TRPM7Q96QT4 1865 aa26.96■■□□□ 1.91
SYNE4-205ENST00000490730 PI4KAP2A4QPH2 592 aa26.95■■□□□ 1.9
SYNE4-205ENST00000490730 ZNF316A6NFI3 1004 aaPredicted RBP26.95■■□□□ 1.9
SYNE4-205ENST00000490730 PDE8AO60658 829 aa26.95■■□□□ 1.9
SYNE4-205ENST00000490730 KSR2Q6VAB6 950 aa26.95■■□□□ 1.9
SYNE4-205ENST00000490730 PI4KAP1Q8N8J0 262 aa26.95■■□□□ 1.9
SYNE4-205ENST00000490730 SALL2Q9Y467 1007 aaPredicted RBP26.95■■□□□ 1.9
SYNE4-205ENST00000490730 RASSF10A6NK89 507 aa26.94■■□□□ 1.9
SYNE4-205ENST00000490730 DOK7Q18PE1 504 aa26.94■■□□□ 1.9
SYNE4-205ENST00000490730 PAXIP1Q6ZW49 1069 aaPredicted RBP26.94■■□□□ 1.9
SYNE4-205ENST00000490730 TBC1D16Q8TBP0 767 aa26.94■■□□□ 1.9
SYNE4-205ENST00000490730 ANKIB1Q9P2G1 1089 aa26.94■■□□□ 1.9
SYNE4-205ENST00000490730 NEXNQ0ZGT2 675 aa26.93■■□□□ 1.9
SYNE4-205ENST00000490730 AIDAQ96BJ3 306 aa26.93■■□□□ 1.9
SYNE4-205ENST00000490730 CNOT7Q9UIV1 285 aaKnown RBP26.93■■□□□ 1.9
SYNE4-205ENST00000490730 ZBTB12Q9Y330 459 aaPredicted RBP26.93■■□□□ 1.9
SYNE4-205ENST00000490730 SHTN1A0MZ66 631 aa26.92■■□□□ 1.9
SYNE4-205ENST00000490730 PSMD14O00487 310 aa26.92■■□□□ 1.9
SYNE4-205ENST00000490730 ECE2O60344 883 aa26.92■■□□□ 1.9
SYNE4-205ENST00000490730 UFL1O94874 794 aa26.92■■□□□ 1.9
SYNE4-205ENST00000490730 MICALL2Q8IY33 904 aa26.92■■□□□ 1.9
SYNE4-205ENST00000490730 IL16Q14005 1332 aa26.91■■□□□ 1.9
SYNE4-205ENST00000490730 G3V3G9 751 aa26.91■■□□□ 1.9
SYNE4-205ENST00000490730 H7C1D1 291 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms