RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 TMCO4Q5TGY1 634 aa8.65□□□□□ -1.02
HMGB1P38-201ENST00000490557 PDE12Q6L8Q7 609 aaKnown RBP8.65□□□□□ -1.02
HMGB1P38-201ENST00000490557 ZSCAN29Q8IWY8 852 aaPredicted RBP8.65□□□□□ -1.02
HMGB1P38-201ENST00000490557 GOLGA6L1Q8N7Z2 621 aa8.65□□□□□ -1.02
HMGB1P38-201ENST00000490557 GDF2Q9UK05 429 aaPredicted RBP8.65□□□□□ -1.02
HMGB1P38-201ENST00000490557 NEURL1BA8MQ27 555 aa8.64□□□□□ -1.03
HMGB1P38-201ENST00000490557 TARSP26639 723 aaKnown RBP8.64□□□□□ -1.03
HMGB1P38-201ENST00000490557 UBE2OQ9C0C9 1292 aaKnown RBP8.64□□□□□ -1.03
HMGB1P38-201ENST00000490557 GGA1Q9UJY5 639 aa8.64□□□□□ -1.03
HMGB1P38-201ENST00000490557 PSAPP07602 524 aa8.63□□□□□ -1.03
HMGB1P38-201ENST00000490557 GJD3Q8N144 294 aa8.63□□□□□ -1.03
HMGB1P38-201ENST00000490557 RBCK1Q9BYM8 510 aa8.63□□□□□ -1.03
HMGB1P38-201ENST00000490557 GGNBP2Q9H3C7 697 aa8.63□□□□□ -1.03
HMGB1P38-201ENST00000490557 ELP3Q9H9T3 547 aa8.63□□□□□ -1.03
HMGB1P38-201ENST00000490557 A6NHS1 94 aa8.62□□□□□ -1.03
HMGB1P38-201ENST00000490557 SIN3BO75182 1162 aa8.62□□□□□ -1.03
HMGB1P38-201ENST00000490557 NEFLP07196 543 aa8.62□□□□□ -1.03
HMGB1P38-201ENST00000490557 MAP3K10Q02779 954 aa8.62□□□□□ -1.03
HMGB1P38-201ENST00000490557 LCE2CQ5TA81 110 aa8.62□□□□□ -1.03
HMGB1P38-201ENST00000490557 DMRTB1Q96MA1 342 aa8.62□□□□□ -1.03
HMGB1P38-201ENST00000490557 ABI2Q9NYB9 513 aaPredicted RBP8.62□□□□□ -1.03
HMGB1P38-201ENST00000490557 MAP3K6O95382 1288 aa8.61□□□□□ -1.03
HMGB1P38-201ENST00000490557 ALAS2P22557 587 aa8.61□□□□□ -1.03
HMGB1P38-201ENST00000490557 PCSK7Q16549 785 aa8.61□□□□□ -1.03
HMGB1P38-201ENST00000490557 ZFATQ9P243 1243 aa8.61□□□□□ -1.03
HMGB1P38-201ENST00000490557 PHF20L1A8MW92 1017 aa8.6□□□□□ -1.03
HMGB1P38-201ENST00000490557 SLURP2P0DP57 97 aa8.6□□□□□ -1.03
HMGB1P38-201ENST00000490557 SLCO4C1Q6ZQN7 724 aa8.6□□□□□ -1.03
HMGB1P38-201ENST00000490557 DHX32Q7L7V1 743 aaKnown RBP8.6□□□□□ -1.03
HMGB1P38-201ENST00000490557 SNX29Q8TEQ0 813 aa8.6□□□□□ -1.03
HMGB1P38-201ENST00000490557 ACDQ96AP0 544 aa8.6□□□□□ -1.03
HMGB1P38-201ENST00000490557 TMEM63CQ9P1W3 806 aa8.6□□□□□ -1.03
HMGB1P38-201ENST00000490557 MMP20O60882 483 aa8.59□□□□□ -1.03
HMGB1P38-201ENST00000490557 PHACTR2O75167 634 aa8.59□□□□□ -1.03
HMGB1P38-201ENST00000490557 BCRP11274 1271 aa8.59□□□□□ -1.03
HMGB1P38-201ENST00000490557 AMPD1P23109 780 aa8.59□□□□□ -1.03
HMGB1P38-201ENST00000490557 PLAURQ03405 335 aa8.59□□□□□ -1.03
HMGB1P38-201ENST00000490557 XKR5Q6UX68 686 aa8.59□□□□□ -1.03
HMGB1P38-201ENST00000490557 TMC7Q7Z402 723 aa8.59□□□□□ -1.03
HMGB1P38-201ENST00000490557 SVOPQ8N4V2 548 aa8.59□□□□□ -1.03
HMGB1P38-201ENST00000490557 TLR7Q9NYK1 1049 aaKnown RBP8.59□□□□□ -1.03
HMGB1P38-201ENST00000490557 TNFRSF21O75509 655 aa8.58□□□□□ -1.04
HMGB1P38-201ENST00000490557 CES1P23141 567 aa8.58□□□□□ -1.04
HMGB1P38-201ENST00000490557 LCE2AQ5TA79 106 aaPredicted RBP8.58□□□□□ -1.04
HMGB1P38-201ENST00000490557 GALNT6Q8NCL4 622 aa8.58□□□□□ -1.04
HMGB1P38-201ENST00000490557 TNFRSF25Q93038 417 aa8.58□□□□□ -1.04
HMGB1P38-201ENST00000490557 PMEPA1Q969W9 287 aa8.58□□□□□ -1.04
HMGB1P38-201ENST00000490557 ASB16Q96NS5 453 aa8.58□□□□□ -1.04
HMGB1P38-201ENST00000490557 FAM129BQ96TA1 746 aa8.58□□□□□ -1.04
HMGB1P38-201ENST00000490557 ENAMQ9NRM1 1142 aa8.58□□□□□ -1.04
HMGB1P38-201ENST00000490557 DNAJB12Q9NXW2 375 aaKnown RBP8.58□□□□□ -1.04
HMGB1P38-201ENST00000490557 ELOA3CA0A087WX78 387 aaPredicted RBP8.57□□□□□ -1.04
HMGB1P38-201ENST00000490557 ELOA3DA6NLF2 546 aaPredicted RBP8.57□□□□□ -1.04
HMGB1P38-201ENST00000490557 WIPF1O43516 503 aa8.57□□□□□ -1.04
HMGB1P38-201ENST00000490557 ADH7P40394 386 aa8.57□□□□□ -1.04
HMGB1P38-201ENST00000490557 ELOA3BQ3SY89 546 aa8.57□□□□□ -1.04
HMGB1P38-201ENST00000490557 FCHSD1Q86WN1 690 aa8.57□□□□□ -1.04
HMGB1P38-201ENST00000490557 ELOA3Q8NG57 546 aa8.57□□□□□ -1.04
HMGB1P38-201ENST00000490557 OR13H1Q8NG92 308 aa8.57□□□□□ -1.04
HMGB1P38-201ENST00000490557 EDARADDQ8WWZ3 215 aa8.57□□□□□ -1.04
HMGB1P38-201ENST00000490557 SPACA7Q96KW9 195 aa8.57□□□□□ -1.04
HMGB1P38-201ENST00000490557 NIF3L1Q9GZT8 377 aa8.57□□□□□ -1.04
HMGB1P38-201ENST00000490557 RBSNQ9H1K0 784 aa8.57□□□□□ -1.04
HMGB1P38-201ENST00000490557 CELA2BP08218 269 aaPredicted RBP8.56□□□□□ -1.04
HMGB1P38-201ENST00000490557 EPXP11678 715 aa8.56□□□□□ -1.04
HMGB1P38-201ENST00000490557 SOX18P35713 384 aa8.56□□□□□ -1.04
HMGB1P38-201ENST00000490557 NRLP54845 237 aa8.56□□□□□ -1.04
HMGB1P38-201ENST00000490557 INSM1Q01101 510 aaPredicted RBP8.56□□□□□ -1.04
HMGB1P38-201ENST00000490557 PLCB3Q01970 1234 aa8.56□□□□□ -1.04
HMGB1P38-201ENST00000490557 MLLT1Q03111 559 aaPredicted RBP8.56□□□□□ -1.04
HMGB1P38-201ENST00000490557 HYAL2Q12891 473 aa8.56□□□□□ -1.04
HMGB1P38-201ENST00000490557 LYPD4Q6UWN0 246 aa8.56□□□□□ -1.04
HMGB1P38-201ENST00000490557 NCAPG2Q86XI2 1143 aa8.56□□□□□ -1.04
HMGB1P38-201ENST00000490557 NSUN5Q96P11 429 aaKnown RBP8.56□□□□□ -1.04
HMGB1P38-201ENST00000490557 KLF15Q9UIH9 416 aa8.56□□□□□ -1.04
HMGB1P38-201ENST00000490557 FOXD3Q9UJU5 478 aaPredicted RBP8.56□□□□□ -1.04
HMGB1P38-201ENST00000490557 ADARB2-AS1A8MUL3 147 aa8.55□□□□□ -1.04
HMGB1P38-201ENST00000490557 GPR182O15218 404 aa8.55□□□□□ -1.04
HMGB1P38-201ENST00000490557 OIP5O43482 229 aa8.55□□□□□ -1.04
HMGB1P38-201ENST00000490557 GPLD1P80108 840 aa8.55□□□□□ -1.04
HMGB1P38-201ENST00000490557 FAM35AQ86V20 835 aa8.55□□□□□ -1.04
HMGB1P38-201ENST00000490557 C1orf127Q8N9H9 656 aa8.55□□□□□ -1.04
HMGB1P38-201ENST00000490557 NEDD1Q8NHV4 660 aa8.55□□□□□ -1.04
HMGB1P38-201ENST00000490557 LRRC4BQ9NT99 713 aa8.55□□□□□ -1.04
HMGB1P38-201ENST00000490557 SLC6A14Q9UN76 642 aa8.55□□□□□ -1.04
HMGB1P38-201ENST00000490557 ANKRD33BA6NCL7 494 aa8.54□□□□□ -1.04
HMGB1P38-201ENST00000490557 GHRHP01286 108 aa8.54□□□□□ -1.04
HMGB1P38-201ENST00000490557 EIF2AK2P19525 551 aaKnown RBP8.54□□□□□ -1.04
HMGB1P38-201ENST00000490557 MFAP1P55081 439 aaKnown RBP8.54□□□□□ -1.04
HMGB1P38-201ENST00000490557 HFE2Q6ZVN8 426 aa8.54□□□□□ -1.04
HMGB1P38-201ENST00000490557 MICALL1Q8N3F8 863 aa8.54□□□□□ -1.04
HMGB1P38-201ENST00000490557 ZSCAN1Q8NBB4 408 aa8.54□□□□□ -1.04
HMGB1P38-201ENST00000490557 TRPM4Q8TD43 1214 aa8.54□□□□□ -1.04
HMGB1P38-201ENST00000490557 ALKBH8Q96BT7 664 aaKnown RBP8.54□□□□□ -1.04
HMGB1P38-201ENST00000490557 CNTN3Q9P232 1028 aa8.54□□□□□ -1.04
HMGB1P38-201ENST00000490557 TREHO43280 583 aa8.53□□□□□ -1.04
HMGB1P38-201ENST00000490557 CPB1P15086 417 aa8.53□□□□□ -1.04
HMGB1P38-201ENST00000490557 ERCC3P19447 782 aa8.53□□□□□ -1.04
HMGB1P38-201ENST00000490557 MAPK8P45983 427 aa8.53□□□□□ -1.04
HMGB1P38-201ENST00000490557 ZNF385CQ66K41 422 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms